RNA–Protein interactions for RNA: YNL299W

TRF5, Transcript of Non-canonical poly(A) polymerase, yeastyeast

Gene TRF5, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRF5YNL299W IFH1P39520 1085 aa6.31□□□□□ -1.4
TRF5YNL299W TY2B-LR1P0C2J3 1770 aa6.3□□□□□ -1.4
TRF5YNL299W TY2B-FP0CX63 1770 aa6.3□□□□□ -1.4
TRF5YNL299W TY2B-GR2P0CX64 1770 aa6.3□□□□□ -1.4
TRF5YNL299W TY2B-CP25384 1770 aa6.3□□□□□ -1.4
TRF5YNL299W TY2B-DR2Q03494 1770 aa6.3□□□□□ -1.4
TRF5YNL299W TY1B-DR1Q03855 1755 aa6.3□□□□□ -1.4
TRF5YNL299W TY2B-DR3Q07791 1770 aaKnown RBP6.3□□□□□ -1.4
TRF5YNL299W TY2B-OR1Q12113 1770 aa6.3□□□□□ -1.4
TRF5YNL299W TY2B-DR1Q12472 1770 aa6.3□□□□□ -1.4
TRF5YNL299W TY2B-OR2Q12501 1770 aa6.3□□□□□ -1.4
TRF5YNL299W YCF1P39109 1515 aaKnown RBP6.3□□□□□ -1.4
TRF5YNL299W MAK11P20484 414 aaKnown RBP6.29□□□□□ -1.4
TRF5YNL299W RKR1Q04781 1562 aa6.29□□□□□ -1.4
TRF5YNL299W DSF2P38213 736 aa6.29□□□□□ -1.4
TRF5YNL299W VPS29P38759 282 aa6.29□□□□□ -1.4
TRF5YNL299W STU1P38198 1513 aa6.28□□□□□ -1.4
TRF5YNL299W TOP2P06786 1428 aaKnown RBP6.28□□□□□ -1.4
TRF5YNL299W TGL3P40308 642 aa6.27□□□□□ -1.41
TRF5YNL299W NSR1P27476 414 aaKnown RBP RIP-Chip data6.26□□□□□ -1.41not detected
TRF5YNL299W YOR1P53049 1477 aa6.25□□□□□ -1.41
TRF5YNL299W TY1B-DR3Q99231 1755 aa6.25□□□□□ -1.41
TRF5YNL299W PBS2P08018 668 aa6.25□□□□□ -1.41
TRF5YNL299W YMR1P47147 688 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
TRF5YNL299W TY2B-BQ12491 1770 aa6.24□□□□□ -1.41
TRF5YNL299W RLF2Q12495 606 aa6.23□□□□□ -1.41
TRF5YNL299W TY1B-BRQ12193 1756 aa6.23□□□□□ -1.41
TRF5YNL299W TY1B-GR3Q12316 1755 aa6.23□□□□□ -1.41
TRF5YNL299W TY1B-ORQ92393 1755 aa6.23□□□□□ -1.41
TRF5YNL299W SMC4Q12267 1418 aa6.23□□□□□ -1.41
TRF5YNL299W TY1B-HO13535 1793 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-DR5P0C2I2 1755 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-DR6P0C2I3 1755 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-LR2P0C2I5 1755 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-LR3P0C2I6 1755 aaKnown RBP6.21□□□□□ -1.41
TRF5YNL299W TY1B-PR1P0C2I9 1755 aaKnown RBP6.21□□□□□ -1.41
TRF5YNL299W TY1B-PR2P0C2J0 1756 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-PR3P0C2J1 1755 aaKnown RBP6.21□□□□□ -1.41
TRF5YNL299W TY1B-JR1P47098 1755 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-ML2Q03434 1755 aaKnown RBP6.21□□□□□ -1.41
TRF5YNL299W TY1B-ER1Q03612 1755 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-ML1Q04711 1755 aaKnown RBP6.21□□□□□ -1.41
TRF5YNL299W TY1B-GR2Q12269 1755 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-OLQ12273 1755 aa6.21□□□□□ -1.41
TRF5YNL299W TY1B-PLQ12414 1755 aaKnown RBP6.21□□□□□ -1.41
TRF5YNL299W COQ8P27697 501 aa6.21□□□□□ -1.41
TRF5YNL299W CDC25P04821 1589 aa6.21□□□□□ -1.42
TRF5YNL299W STS1P38637 319 aa6.21□□□□□ -1.42
TRF5YNL299W YNR021WP53723 404 aaKnown RBP6.21□□□□□ -1.42
TRF5YNL299W YOR238WQ08634 303 aa6.21□□□□□ -1.42
TRF5YNL299W CHD1P32657 1468 aa6.2□□□□□ -1.42
TRF5YNL299W KIN1P13185 1064 aa6.2□□□□□ -1.42
TRF5YNL299W YAP5P40574 245 aa6.2□□□□□ -1.42
TRF5YNL299W YTA7P40340 1379 aa6.19□□□□□ -1.42
TRF5YNL299W DBP1P24784 617 aaKnown RBP6.19□□□□□ -1.42
TRF5YNL299W MYO4P32492 1471 aa6.18□□□□□ -1.42
TRF5YNL299W PAN1P32521 1480 aa6.16□□□□□ -1.42
TRF5YNL299W YFR006WP43590 535 aa6.16□□□□□ -1.42
TRF5YNL299W NOP53Q12080 455 aaKnown RBP6.16□□□□□ -1.42
TRF5YNL299W MMS22Q06164 1454 aa6.15□□□□□ -1.42
TRF5YNL299W GLC3P32775 704 aa6.15□□□□□ -1.42
TRF5YNL299W EDS1P38073 919 aa6.15□□□□□ -1.43
TRF5YNL299W NUP42P49686 430 aaKnown RBP6.15□□□□□ -1.43
TRF5YNL299W ESC1Q03661 1658 aaKnown RBP6.14□□□□□ -1.43
TRF5YNL299W AIM7Q12156 149 aa6.14□□□□□ -1.43
TRF5YNL299W MAM3Q12296 706 aa6.14□□□□□ -1.43
TRF5YNL299W DNF1P32660 1571 aa6.13□□□□□ -1.43
TRF5YNL299W SPP41P38904 1435 aa6.13□□□□□ -1.43
TRF5YNL299W REF2P42073 533 aaPredicted RBP6.13□□□□□ -1.43
TRF5YNL299W DIT2P21595 489 aa6.13□□□□□ -1.43
TRF5YNL299W IES2P40154 320 aa6.13□□□□□ -1.43
TRF5YNL299W MIF2P35201 549 aa6.12□□□□□ -1.43
TRF5YNL299W RPA190P10964 1664 aaKnown RBP6.12□□□□□ -1.43
TRF5YNL299W PIB1Q06651 286 aa6.11□□□□□ -1.43
TRF5YNL299W MST1P07236 462 aa6.11□□□□□ -1.43
TRF5YNL299W TY1B-JR2P47100 1755 aaKnown RBP6.1□□□□□ -1.43
TRF5YNL299W TY1B-ER2Q03619 1755 aa6.1□□□□□ -1.43
TRF5YNL299W TY1B-MR1Q04214 1755 aa6.1□□□□□ -1.43
TRF5YNL299W TY1B-MR2Q04670 1755 aaKnown RBP6.1□□□□□ -1.43
TRF5YNL299W TY1B-LR1Q12088 1755 aaKnown RBP6.1□□□□□ -1.43
TRF5YNL299W TY1B-NL1Q12112 1755 aa6.1□□□□□ -1.43
TRF5YNL299W TY1B-GR1Q12141 1755 aa6.1□□□□□ -1.43
TRF5YNL299W TY1B-BLQ12490 1755 aa6.1□□□□□ -1.43
TRF5YNL299W VTH1P40438 1549 aa6.1□□□□□ -1.43
TRF5YNL299W VTH2P40890 1549 aa6.1□□□□□ -1.43
TRF5YNL299W TSC11P40061 1430 aa6.09□□□□□ -1.43
TRF5YNL299W VMA1P17255 1071 aaKnown RBP6.09□□□□□ -1.44
TRF5YNL299W GUA1P38625 525 aaKnown RBP6.08□□□□□ -1.44
TRF5YNL299W SNQ2P32568 1501 aaKnown RBP6.07□□□□□ -1.44
TRF5YNL299W COX6P00427 148 aa6.07□□□□□ -1.44
TRF5YNL299W TRM732Q03496 1420 aa6.06□□□□□ -1.44
TRF5YNL299W PTC3P34221 468 aaKnown RBP6.06□□□□□ -1.44
TRF5YNL299W MAK21Q12176 1025 aaKnown RBP6.05□□□□□ -1.44
TRF5YNL299W NTE1Q04958 1679 aa6.05□□□□□ -1.44
TRF5YNL299W MET5P47169 1442 aa6.04□□□□□ -1.44
TRF5YNL299W MLP2P40457 1679 aa6.03□□□□□ -1.44
TRF5YNL299W RPO21P04050 1733 aaKnown RBP6.03□□□□□ -1.44
TRF5YNL299W SNT2P53127 1403 aa6.03□□□□□ -1.44
TRF5YNL299W ULS1Q08562 1619 aa6.02□□□□□ -1.45
TRF5YNL299W GTT3P39996 337 aa6.02□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 46.9 ms