RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C PTC4P38089 393 aa9.2□□□□□ -0.94
SSO2YMR183C DPS1P04802 557 aaKnown RBP9.19□□□□□ -0.94
SSO2YMR183C DCW1P36091 449 aa9.19□□□□□ -0.94
SSO2YMR183C YDR344CQ05510 147 aa9.19□□□□□ -0.94
SSO2YMR183C YEL023CP39992 682 aa9.18□□□□□ -0.94
SSO2YMR183C CST9Q06032 482 aa9.13□□□□□ -0.95
SSO2YMR183C ELP4Q02884 456 aaKnown RBP9.1□□□□□ -0.95
SSO2YMR183C ARP8Q12386 881 aaKnown RBP RIP-Chip data9.08□□□□□ -0.96not detected
SSO2YMR183C RCR1P38212 213 aa9.06□□□□□ -0.96
SSO2YMR183C RGA1P39083 1007 aa9.06□□□□□ -0.96
SSO2YMR183C PML39Q03760 334 aa9.04□□□□□ -0.96
SSO2YMR183C SSP1P38871 571 aa9.02□□□□□ -0.97
SSO2YMR183C SRC1Q03707 834 aa9.02□□□□□ -0.97
SSO2YMR183C MGA2P40578 1113 aa8.96□□□□□ -0.98
SSO2YMR183C ARH1P48360 493 aa8.94□□□□□ -0.98
SSO2YMR183C GRE2Q12068 342 aaKnown RBP8.87□□□□□ -0.99
SSO2YMR183C MID1P41821 548 aa8.86□□□□□ -0.99
SSO2YMR183C SPT23P35210 1082 aa8.85□□□□□ -0.99
SSO2YMR183C PEX29Q03370 554 aa8.76□□□□□ -1.01
SSO2YMR183C ATH1P48016 1211 aa8.74□□□□□ -1.01
SSO2YMR183C NST1P53935 1240 aa8.74□□□□□ -1.01
SSO2YMR183C HAP5Q02516 242 aa8.73□□□□□ -1.01
SSO2YMR183C GUT1P32190 709 aa8.72□□□□□ -1.01
SSO2YMR183C BNI4P53858 892 aa8.7□□□□□ -1.02
SSO2YMR183C YML082WQ04533 649 aaKnown RBP8.7□□□□□ -1.02
SSO2YMR183C MIF2P35201 549 aa8.67□□□□□ -1.02
SSO2YMR183C PTC2P39966 464 aaKnown RBP8.67□□□□□ -1.02
SSO2YMR183C RAS1P01119 309 aa8.66□□□□□ -1.02
SSO2YMR183C PTC3P34221 468 aaKnown RBP8.66□□□□□ -1.02
SSO2YMR183C SOL3P38858 249 aa8.65□□□□□ -1.02
SSO2YMR183C EDS1P38073 919 aa8.64□□□□□ -1.03
SSO2YMR183C MPH3P0CE00 602 aa8.63□□□□□ -1.03
SSO2YMR183C AI4P03878 556 aa8.61□□□□□ -1.03
SSO2YMR183C ILV3P39522 585 aaKnown RBP8.59□□□□□ -1.03
SSO2YMR183C MPC54Q08550 464 aa8.56□□□□□ -1.04
SSO2YMR183C MAK11P20484 414 aaKnown RBP8.54□□□□□ -1.04
SSO2YMR183C TRK1P12685 1235 aa8.51□□□□□ -1.05
SSO2YMR183C NMA111P53920 997 aa8.49□□□□□ -1.05
SSO2YMR183C YPR015CQ12531 247 aa8.48□□□□□ -1.05
SSO2YMR183C AMS1P22855 1083 aa8.44□□□□□ -1.06
SSO2YMR183C YPL062WQ02781 134 aa8.44□□□□□ -1.06
SSO2YMR183C COQ8P27697 501 aa8.43□□□□□ -1.06
SSO2YMR183C RAM2P29703 316 aa8.43□□□□□ -1.06
SSO2YMR183C RAM1P22007 431 aa8.39□□□□□ -1.07
SSO2YMR183C DPL1Q05567 589 aa8.39□□□□□ -1.07
SSO2YMR183C YGR273CP53329 174 aa8.38□□□□□ -1.07
SSO2YMR183C SLI15P38283 698 aa8.37□□□□□ -1.07
SSO2YMR183C GYP1Q08484 637 aa8.35□□□□□ -1.07
SSO2YMR183C SDH2P21801 266 aa8.32□□□□□ -1.08
SSO2YMR183C ISU2Q12056 156 aa8.27□□□□□ -1.09
SSO2YMR183C SAS4Q04003 481 aa8.22□□□□□ -1.09
SSO2YMR183C YEL077CQ3E7X8 1277 aa8.21□□□□□ -1.1
SSO2YMR183C PDR1P12383 1068 aa8.19□□□□□ -1.1
SSO2YMR183C NOP53Q12080 455 aaKnown RBP8.18□□□□□ -1.1
SSO2YMR183C CDC73Q06697 393 aa8.16□□□□□ -1.1
SSO2YMR183C GAR1P28007 205 aaKnown RBP8.15□□□□□ -1.1
SSO2YMR183C BRE2P43132 505 aa8.13□□□□□ -1.11
SSO2YMR183C KEX1P09620 729 aa8.12□□□□□ -1.11
SSO2YMR183C GBP2P25555 427 aaKnown RBP RIP-Chip data8.11□□□□□ -1.11not detected
SSO2YMR183C MRF1P30775 413 aaPredicted RBP8.09□□□□□ -1.11
SSO2YMR183C AIR1P40507 360 aaKnown RBP8.06□□□□□ -1.12
SSO2YMR183C GCR2Q01722 534 aa8.05□□□□□ -1.12
SSO2YMR183C CLA4P48562 842 aa8□□□□□ -1.13
SSO2YMR183C BUD20Q08004 166 aaPredicted RBP7.99□□□□□ -1.13
SSO2YMR183C SET1P38827 1080 aaKnown RBP7.96□□□□□ -1.14
SSO2YMR183C PRT1P06103 763 aaKnown RBP7.95□□□□□ -1.14
SSO2YMR183C ERG12P07277 443 aa7.95□□□□□ -1.14
SSO2YMR183C CST6P40535 587 aa7.95□□□□□ -1.14
SSO2YMR183C YLR326WQ06170 240 aaKnown RBP7.95□□□□□ -1.14
SSO2YMR183C UBP14P38237 781 aaKnown RBP7.92□□□□□ -1.14
SSO2YMR183C MET22P32179 357 aa7.91□□□□□ -1.14
SSO2YMR183C PCS60P38137 543 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
SSO2YMR183C DMA1P38823 416 aa7.89□□□□□ -1.15
SSO2YMR183C STR2P47164 639 aa7.89□□□□□ -1.15
SSO2YMR183C RPP1BP10622 106 aaKnown RBP7.87□□□□□ -1.15
SSO2YMR183C VHR2P40041 505 aa7.87□□□□□ -1.15
SSO2YMR183C LAM6Q08001 693 aa7.87□□□□□ -1.15
SSO2YMR183C ISM1P48526 1002 aa7.86□□□□□ -1.15
SSO2YMR183C ENV9Q08651 330 aa7.86□□□□□ -1.15
SSO2YMR183C YRR1Q12172 810 aa7.86□□□□□ -1.15
SSO2YMR183C RAD54P32863 898 aa7.85□□□□□ -1.15
SSO2YMR183C CDC4P07834 779 aa7.84□□□□□ -1.15
SSO2YMR183C IFH1P39520 1085 aa7.84□□□□□ -1.15
SSO2YMR183C RQC2Q12532 1038 aaKnown RBP7.8□□□□□ -1.16
SSO2YMR183C FRK1Q03002 865 aaPredicted RBP7.79□□□□□ -1.16
SSO2YMR183C YPR148CQ06523 435 aa7.79□□□□□ -1.16
SSO2YMR183C NUD1P32336 851 aa7.78□□□□□ -1.16
SSO2YMR183C YDR444WQ04093 687 aa7.78□□□□□ -1.16
SSO2YMR183C PEX21P50091 288 aa7.77□□□□□ -1.17
SSO2YMR183C YDL176WQ12027 708 aa7.75□□□□□ -1.17
SSO2YMR183C SPT16P32558 1035 aaKnown RBP7.74□□□□□ -1.17
SSO2YMR183C TY1A-DR4O74302 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-HP0C2I4 478 aaKnown RBP7.73□□□□□ -1.17
SSO2YMR183C TY1A-AP0CX57 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-PR1P0CX58 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-ORP0CX59 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-PR2P0CX60 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-DR5P0CX65 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-ER2P0CX66 440 aa7.73□□□□□ -1.17
SSO2YMR183C TY1A-GR3P0CX67 440 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 39.1 ms