RNA–Protein interactions for RNA: YKR071C

DRE2, Transcript of Component of the cytosolic Fe-S protein assembly (CIA) machinery, yeast

Gene DRE2, Length 1,047 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DRE2	YKR071C	TOP2	P06786	1428 aa	Known RBP	11.26	□□□□□ -0.61
DRE2	YKR071C	BNI1	P41832	1953 aa		11.26	□□□□□ -0.61
DRE2	YKR071C	GEA2	P39993	1459 aa	Known RBP	11.25	□□□□□ -0.61
DRE2	YKR071C	MMS22	Q06164	1454 aa		11.22	□□□□□ -0.61
DRE2	YKR071C	TFC8	Q12308	588 aa		11.2	□□□□□ -0.62
DRE2	YKR071C	TRM732	Q03496	1420 aa		11.18	□□□□□ -0.62
DRE2	YKR071C	HO	P09932	586 aa		11.17	□□□□□ -0.62
DRE2	YKR071C	POL1	P13382	1468 aa		11.14	□□□□□ -0.63
DRE2	YKR071C	NTE1	Q04958	1679 aa		11.13	□□□□□ -0.63
DRE2	YKR071C	YRF1-1	P0CX20	1796 aa		11.12	□□□□□ -0.63
DRE2	YKR071C	YRF1-5	P0CX21	1796 aa		11.12	□□□□□ -0.63
DRE2	YKR071C	YRF1-8	P0CX22	1796 aa		11.12	□□□□□ -0.63
DRE2	YKR071C	ITT1	Q04638	464 aa		11.11	□□□□□ -0.63
DRE2	YKR071C	VPS15	P22219	1454 aa		11.09	□□□□□ -0.63
DRE2	YKR071C	NUP159	P40477	1460 aa		11.08	□□□□□ -0.64
DRE2	YKR071C	YOR1	P53049	1477 aa		11.08	□□□□□ -0.64
DRE2	YKR071C	MMS1	Q06211	1407 aa		11.08	□□□□□ -0.64
DRE2	YKR071C	DCD1	P06773	312 aa		11.07	□□□□□ -0.64
DRE2	YKR071C	SPP41	P38904	1435 aa		11.07	□□□□□ -0.64
DRE2	YKR071C	SMC4	Q12267	1418 aa		11.07	□□□□□ -0.64
DRE2	YKR071C	TY1B-JR2	P47100	1755 aa	Known RBP	11.06	□□□□□ -0.64
DRE2	YKR071C	TY1B-ER2	Q03619	1755 aa		11.06	□□□□□ -0.64
DRE2	YKR071C	TY1B-MR1	Q04214	1755 aa		11.06	□□□□□ -0.64
DRE2	YKR071C	TY1B-MR2	Q04670	1755 aa	Known RBP	11.06	□□□□□ -0.64
DRE2	YKR071C	TY1B-LR1	Q12088	1755 aa	Known RBP	11.06	□□□□□ -0.64
DRE2	YKR071C	TY1B-NL1	Q12112	1755 aa		11.06	□□□□□ -0.64
DRE2	YKR071C	TY1B-GR1	Q12141	1755 aa		11.06	□□□□□ -0.64
DRE2	YKR071C	TY1B-BL	Q12490	1755 aa		11.06	□□□□□ -0.64
DRE2	YKR071C	STU1	P38198	1513 aa		11.05	□□□□□ -0.64
DRE2	YKR071C	UBP10	P53874	792 aa	Predicted RBP	11.05	□□□□□ -0.64
DRE2	YKR071C	ABP1	P15891	592 aa	Known RBP	11.03	□□□□□ -0.64
DRE2	YKR071C	IRC20	Q06554	1556 aa		11.03	□□□□□ -0.64
DRE2	YKR071C	DRS2	P39524	1355 aa		11.03	□□□□□ -0.64
DRE2	YKR071C	RPO21	P04050	1733 aa	Known RBP	11.02	□□□□□ -0.65
DRE2	YKR071C	VTH1	P40438	1549 aa		11.02	□□□□□ -0.65
DRE2	YKR071C	VTH2	P40890	1549 aa		11.02	□□□□□ -0.65
DRE2	YKR071C	TSC11	P40061	1430 aa		10.98	□□□□□ -0.65
DRE2	YKR071C	DNF2	Q12675	1612 aa		10.94	□□□□□ -0.66
DRE2	YKR071C	OXP1	P28273	1286 aa		10.93	□□□□□ -0.66
DRE2	YKR071C	MAP2	P38174	421 aa	Known RBP	10.93	□□□□□ -0.66
DRE2	YKR071C	YFR006W	P43590	535 aa		10.93	□□□□□ -0.66
DRE2	YKR071C	YIL055C	P40523	627 aa	Known RBP	10.92	□□□□□ -0.66
DRE2	YKR071C	MYO4	P32492	1471 aa		10.88	□□□□□ -0.67
DRE2	YKR071C	PTP3	P40048	928 aa		10.88	□□□□□ -0.67
DRE2	YKR071C	NUP170	P38181	1502 aa		10.88	□□□□□ -0.67
DRE2	YKR071C	SPO14	P36126	1683 aa		10.86	□□□□□ -0.67
DRE2	YKR071C	SNQ2	P32568	1501 aa	Known RBP	10.84	□□□□□ -0.67
DRE2	YKR071C	BCH2	P36122	765 aa		10.83	□□□□□ -0.68
DRE2	YKR071C	ULS1	Q08562	1619 aa		10.83	□□□□□ -0.68
DRE2	YKR071C	SCY1	P53009	804 aa		10.82	□□□□□ -0.68
DRE2	YKR071C	DOP1	Q03921	1698 aa		10.79	□□□□□ -0.68
DRE2	YKR071C	SNT2	P53127	1403 aa		10.78	□□□□□ -0.68
DRE2	YKR071C	SIS1	P25294	352 aa	Known RBP	10.76	□□□□□ -0.69
DRE2	YKR071C	YAH1	Q12184	172 aa	Known RBP	10.74	□□□□□ -0.69
DRE2	YKR071C	YOR093C	Q12275	1648 aa		10.72	□□□□□ -0.69
DRE2	YKR071C	SLX5	P32828	619 aa	Known RBP	10.71	□□□□□ -0.69
DRE2	YKR071C	RSM7	P47150	247 aa		10.7	□□□□□ -0.7
DRE2	YKR071C	MLP2	P40457	1679 aa		10.69	□□□□□ -0.7
DRE2	YKR071C	PDR12	Q02785	1511 aa		10.68	□□□□□ -0.7
DRE2	YKR071C	YTA7	P40340	1379 aa		10.67	□□□□□ -0.7
DRE2	YKR071C	GDB1	Q06625	1536 aa		10.67	□□□□□ -0.7
DRE2	YKR071C	MET10	P39692	1035 aa		10.66	□□□□□ -0.7
DRE2	YKR071C	STH1	P32597	1359 aa		10.65	□□□□□ -0.7
DRE2	YKR071C	TIF4632	P39936	914 aa	Known RBP	10.65	□□□□□ -0.7
DRE2	YKR071C	TRM3	Q07527	1436 aa		10.65	□□□□□ -0.7
DRE2	YKR071C	PDR10	P51533	1564 aa		10.64	□□□□□ -0.71
DRE2	YKR071C	IQG1	Q12280	1495 aa		10.63	□□□□□ -0.71
DRE2	YKR071C	EPS1	P40557	701 aa		10.62	□□□□□ -0.71
DRE2	YKR071C	BBC1	P47068	1157 aa		10.62	□□□□□ -0.71
DRE2	YKR071C	RTT106	P40161	455 aa		10.6	□□□□□ -0.71
DRE2	YKR071C	SSP1	P38871	571 aa		10.59	□□□□□ -0.71
DRE2	YKR071C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.58	□□□□□ -0.72	not detected
DRE2	YKR071C	NUP157	P40064	1391 aa	Known RBP	10.57	□□□□□ -0.72
DRE2	YKR071C	CHC1	P22137	1653 aa	Known RBP	10.57	□□□□□ -0.72
DRE2	YKR071C	AI2	P03876	854 aa		10.56	□□□□□ -0.72
DRE2	YKR071C	PDR15	Q04182	1529 aa	Known RBP	10.55	□□□□□ -0.72
DRE2	YKR071C	BDF1	P35817	686 aa		10.55	□□□□□ -0.72
DRE2	YKR071C	YLR271W	Q06152	274 aa		10.55	□□□□□ -0.72
DRE2	YKR071C	BUD3	P25558	1636 aa		10.54	□□□□□ -0.72
DRE2	YKR071C	TGL3	P40308	642 aa		10.53	□□□□□ -0.72
DRE2	YKR071C	UBP9	P39967	754 aa		10.52	□□□□□ -0.73
DRE2	YKR071C	ARO1	P08566	1588 aa	Known RBP	10.52	□□□□□ -0.73
DRE2	YKR071C	DNF3	Q12674	1656 aa		10.48	□□□□□ -0.73
DRE2	YKR071C	PSD2	P53037	1138 aa	Known RBP	10.36	□□□□□ -0.75
DRE2	YKR071C	SAS10	Q12136	610 aa	Predicted RBP	10.35	□□□□□ -0.75
DRE2	YKR071C	YBT1	P32386	1661 aa		10.34	□□□□□ -0.75
DRE2	YKR071C	MGA2	P40578	1113 aa		10.31	□□□□□ -0.76
DRE2	YKR071C	TY3B-G	Q99315	1547 aa		10.29	□□□□□ -0.76
DRE2	YKR071C	IFH1	P39520	1085 aa		10.29	□□□□□ -0.76
DRE2	YKR071C	CAT8	P39113	1433 aa		10.28	□□□□□ -0.76
DRE2	YKR071C	GEA1	P47102	1408 aa	Predicted RBP	10.24	□□□□□ -0.77
DRE2	YKR071C	SEC7	P11075	2009 aa	Known RBP	10.24	□□□□□ -0.77
DRE2	YKR071C	USO1	P25386	1790 aa		10.23	□□□□□ -0.77
DRE2	YKR071C	NSR1	P27476	414 aa	Known RBP RIP-Chip data	10.22	□□□□□ -0.77	not detected
DRE2	YKR071C	YAP3	P38749	330 aa		10.22	□□□□□ -0.77
DRE2	YKR071C	TAF7	Q05021	590 aa		10.22	□□□□□ -0.77
DRE2	YKR071C	YSP2	Q06681	1438 aa		10.22	□□□□□ -0.77
DRE2	YKR071C	BNR1	P40450	1375 aa		10.21	□□□□□ -0.78
DRE2	YKR071C	MRM1	P25270	412 aa		10.19	□□□□□ -0.78
DRE2	YKR071C	CST9	Q06032	482 aa		10.18	□□□□□ -0.78

Retrieved 100 of 5,963 RNA–protein pairs in 11.3 ms