RNA–Protein interactions for RNA: YKL011C

CCE1, Transcript of Mitochondrial cruciform cutting endonuclease, yeastyeast

Gene CCE1, Length 1,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCE1YKL011C HTA1P04911 132 aaKnown RBP10.73□□□□□ -0.69
CCE1YKL011C HTA2P04912 132 aa10.73□□□□□ -0.69
CCE1YKL011C DCW1P36091 449 aa10.7□□□□□ -0.7
CCE1YKL011C PTC4P38089 393 aa10.69□□□□□ -0.7
CCE1YKL011C YEL023CP39992 682 aa10.69□□□□□ -0.7
CCE1YKL011C YDR344CQ05510 147 aa10.6□□□□□ -0.71
CCE1YKL011C XDJ1P39102 459 aa10.59□□□□□ -0.71
CCE1YKL011C VRP1P37370 817 aa10.57□□□□□ -0.72
CCE1YKL011C PML39Q03760 334 aa10.5□□□□□ -0.73
CCE1YKL011C ELP4Q02884 456 aaKnown RBP10.47□□□□□ -0.73
CCE1YKL011C GRE2Q12068 342 aaKnown RBP10.45□□□□□ -0.74
CCE1YKL011C DPS1P04802 557 aaKnown RBP10.41□□□□□ -0.74
CCE1YKL011C ARH1P48360 493 aa10.37□□□□□ -0.75
CCE1YKL011C GUT1P32190 709 aa10.32□□□□□ -0.76
CCE1YKL011C MID1P41821 548 aa10.32□□□□□ -0.76
CCE1YKL011C ATH1P48016 1211 aa10.32□□□□□ -0.76
CCE1YKL011C NST1P53935 1240 aa10.32□□□□□ -0.76
CCE1YKL011C MIF2P35201 549 aa10.29□□□□□ -0.76
CCE1YKL011C EDS1P38073 919 aa10.29□□□□□ -0.76
CCE1YKL011C PTC3P34221 468 aaKnown RBP10.28□□□□□ -0.76
CCE1YKL011C SPT23P35210 1082 aa10.25□□□□□ -0.77
CCE1YKL011C MAK11P20484 414 aaKnown RBP10.24□□□□□ -0.77
CCE1YKL011C SRC1Q03707 834 aa10.24□□□□□ -0.77
CCE1YKL011C SOL3P38858 249 aa10.22□□□□□ -0.77
CCE1YKL011C RGA2Q06407 1009 aa10.22□□□□□ -0.77
CCE1YKL011C PEX29Q03370 554 aa10.19□□□□□ -0.78
CCE1YKL011C RAM2P29703 316 aa10.18□□□□□ -0.78
CCE1YKL011C MPH3P0CE00 602 aa10.17□□□□□ -0.78
CCE1YKL011C AI4P03878 556 aa10.16□□□□□ -0.78
CCE1YKL011C HAP5Q02516 242 aa10.16□□□□□ -0.78
CCE1YKL011C ILV3P39522 585 aaKnown RBP10.15□□□□□ -0.78
CCE1YKL011C BNI4P53858 892 aa10.12□□□□□ -0.79
CCE1YKL011C COQ8P27697 501 aa10.11□□□□□ -0.79
CCE1YKL011C YML082WQ04533 649 aaKnown RBP10.1□□□□□ -0.79
CCE1YKL011C RGA1P39083 1007 aa10.06□□□□□ -0.8
CCE1YKL011C PTC2P39966 464 aaKnown RBP10.06□□□□□ -0.8
CCE1YKL011C MPC54Q08550 464 aa10.04□□□□□ -0.8
CCE1YKL011C YGR273CP53329 174 aa9.97□□□□□ -0.81
CCE1YKL011C NMA111P53920 997 aa9.94□□□□□ -0.82
CCE1YKL011C RAS1P01119 309 aa9.93□□□□□ -0.82
CCE1YKL011C SLI15P38283 698 aa9.9□□□□□ -0.82
CCE1YKL011C YPR015CQ12531 247 aa9.9□□□□□ -0.82
CCE1YKL011C DPL1Q05567 589 aa9.87□□□□□ -0.83
CCE1YKL011C NOP53Q12080 455 aaKnown RBP9.87□□□□□ -0.83
CCE1YKL011C RAM1P22007 431 aa9.84□□□□□ -0.83
CCE1YKL011C TRK1P12685 1235 aa9.75□□□□□ -0.85
CCE1YKL011C AMS1P22855 1083 aa9.75□□□□□ -0.85
CCE1YKL011C ISU2Q12056 156 aa9.75□□□□□ -0.85
CCE1YKL011C KEX1P09620 729 aa9.71□□□□□ -0.86
CCE1YKL011C GYP1Q08484 637 aa9.71□□□□□ -0.86
CCE1YKL011C SDH2P21801 266 aa9.69□□□□□ -0.86
CCE1YKL011C CDC73Q06697 393 aa9.68□□□□□ -0.86
CCE1YKL011C PDR1P12383 1068 aa9.64□□□□□ -0.87
CCE1YKL011C SAS4Q04003 481 aa9.61□□□□□ -0.87
CCE1YKL011C YLR326WQ06170 240 aaKnown RBP9.56□□□□□ -0.88
CCE1YKL011C YEL077CQ3E7X8 1277 aa9.54□□□□□ -0.88
CCE1YKL011C UBP14P38237 781 aaKnown RBP9.53□□□□□ -0.88
CCE1YKL011C YPL062WQ02781 134 aa9.53□□□□□ -0.88
CCE1YKL011C PCS60P38137 543 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
CCE1YKL011C VHR2P40041 505 aa9.47□□□□□ -0.89
CCE1YKL011C MRF1P30775 413 aaPredicted RBP9.44□□□□□ -0.9
CCE1YKL011C RAD54P32863 898 aa9.43□□□□□ -0.9
CCE1YKL011C BUD20Q08004 166 aaPredicted RBP9.43□□□□□ -0.9
CCE1YKL011C RPP1BP10622 106 aaKnown RBP9.39□□□□□ -0.91
CCE1YKL011C PRT1P06103 763 aaKnown RBP9.38□□□□□ -0.91
CCE1YKL011C SET1P38827 1080 aaKnown RBP9.37□□□□□ -0.91
CCE1YKL011C BRE2P43132 505 aa9.37□□□□□ -0.91
CCE1YKL011C STR2P47164 639 aa9.36□□□□□ -0.91
CCE1YKL011C AIR1P40507 360 aaKnown RBP9.35□□□□□ -0.91
CCE1YKL011C YRR1Q12172 810 aa9.34□□□□□ -0.91
CCE1YKL011C ISM1P48526 1002 aa9.32□□□□□ -0.92
CCE1YKL011C CST6P40535 587 aa9.31□□□□□ -0.92
CCE1YKL011C CLA4P48562 842 aa9.31□□□□□ -0.92
CCE1YKL011C ERG12P07277 443 aa9.3□□□□□ -0.92
CCE1YKL011C GAP1P19145 602 aaPredicted RBP9.29□□□□□ -0.92
CCE1YKL011C YDR090CQ03193 310 aa9.29□□□□□ -0.92
CCE1YKL011C GAR1P28007 205 aaKnown RBP9.28□□□□□ -0.92
CCE1YKL011C PEX21P50091 288 aa9.27□□□□□ -0.93
CCE1YKL011C GCR2Q01722 534 aa9.26□□□□□ -0.93
CCE1YKL011C NUD1P32336 851 aa9.25□□□□□ -0.93
CCE1YKL011C LAM6Q08001 693 aa9.23□□□□□ -0.93
CCE1YKL011C TFB4Q12004 338 aa9.23□□□□□ -0.93
CCE1YKL011C GBP2P25555 427 aaKnown RBP RIP-Chip data9.21□□□□□ -0.94not detected
CCE1YKL011C CSC1Q06538 782 aa9.21□□□□□ -0.94
CCE1YKL011C KIC1P38692 1080 aa9.2□□□□□ -0.94
CCE1YKL011C TUM1Q08686 304 aaKnown RBP9.2□□□□□ -0.94
CCE1YKL011C TY1A-DR4O74302 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-HP0C2I4 478 aaKnown RBP9.19□□□□□ -0.94
CCE1YKL011C TY1A-AP0CX57 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-PR1P0CX58 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-ORP0CX59 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-PR2P0CX60 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-DR5P0CX65 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-ER2P0CX66 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-GR3P0CX67 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-LR1P0CX68 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-MR2P0CX69 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-JR2P47099 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-DR1Q03856 440 aa9.19□□□□□ -0.94
CCE1YKL011C TY1A-ML1Q04706 440 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms