RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C IOC4Q04213 475 aa3.04□□□□□ -1.92
TRL1YJL087C YMR1P47147 688 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
TRL1YJL087C SSA1P10591 642 aaKnown RBP3.03□□□□□ -1.92
TRL1YJL087C GEF1P37020 779 aa3.03□□□□□ -1.92
TRL1YJL087C IES2P40154 320 aa3.03□□□□□ -1.92
TRL1YJL087C REF2P42073 533 aaPredicted RBP3.02□□□□□ -1.93
TRL1YJL087C TFB3Q03290 321 aa3.02□□□□□ -1.93
TRL1YJL087C NOP53Q12080 455 aaKnown RBP3.02□□□□□ -1.93
TRL1YJL087C MAK21Q12176 1025 aaKnown RBP3.02□□□□□ -1.93
TRL1YJL087C AIR2Q12476 344 aaKnown RBP3.02□□□□□ -1.93
TRL1YJL087C COQ8P27697 501 aa3.01□□□□□ -1.93
TRL1YJL087C COX6P00427 148 aa3.01□□□□□ -1.93
TRL1YJL087C PKC1P24583 1151 aa3□□□□□ -1.93
TRL1YJL087C VPS29P38759 282 aa3□□□□□ -1.93
TRL1YJL087C ATF2P53296 535 aa3□□□□□ -1.93
TRL1YJL087C GLN1P32288 370 aaKnown RBP2.99□□□□□ -1.93
TRL1YJL087C EAP1P36041 632 aaKnown RBP2.99□□□□□ -1.93
TRL1YJL087C MRX12P47084 519 aa2.99□□□□□ -1.93
TRL1YJL087C DBP1P24784 617 aaKnown RBP2.98□□□□□ -1.93
TRL1YJL087C BIM1P40013 344 aa2.98□□□□□ -1.93
TRL1YJL087C WSC3Q12215 556 aa2.98□□□□□ -1.93
TRL1YJL087C MIF2P35201 549 aa2.97□□□□□ -1.93
TRL1YJL087C TFG1P41895 735 aaPredicted RBP2.97□□□□□ -1.93
TRL1YJL087C EDS1P38073 919 aa2.97□□□□□ -1.93
TRL1YJL087C BRL1P38770 471 aa2.97□□□□□ -1.93
TRL1YJL087C ATG32P40458 529 aa2.97□□□□□ -1.93
TRL1YJL087C PIB1Q06651 286 aa2.97□□□□□ -1.93
TRL1YJL087C SPP1Q03012 353 aa2.96□□□□□ -1.94
TRL1YJL087C MSB4Q12317 492 aa2.96□□□□□ -1.94
TRL1YJL087C YJL007CP47080 104 aa2.96□□□□□ -1.94
TRL1YJL087C MST1P07236 462 aa2.95□□□□□ -1.94
TRL1YJL087C SSA4P22202 642 aaKnown RBP2.95□□□□□ -1.94
TRL1YJL087C YFR006WP43590 535 aa2.95□□□□□ -1.94
TRL1YJL087C NOP7P53261 605 aaKnown RBP2.95□□□□□ -1.94
TRL1YJL087C YDR090CQ03193 310 aa2.95□□□□□ -1.94
TRL1YJL087C PAM1P37304 830 aaKnown RBP2.95□□□□□ -1.94
TRL1YJL087C CSN12P47130 423 aa2.95□□□□□ -1.94
TRL1YJL087C ATH1P48016 1211 aa2.95□□□□□ -1.94
TRL1YJL087C SSA2P10592 639 aaKnown RBP2.94□□□□□ -1.94
TRL1YJL087C SLD2P34252 453 aa2.94□□□□□ -1.94
TRL1YJL087C SNU71P53207 620 aaKnown RBP2.94□□□□□ -1.94
TRL1YJL087C TIF1P10081 395 aaKnown RBP2.94□□□□□ -1.94
TRL1YJL087C UBP14P38237 781 aaKnown RBP2.94□□□□□ -1.94
TRL1YJL087C NOB1Q08444 459 aaKnown RBP2.94□□□□□ -1.94
TRL1YJL087C GRE2Q12068 342 aaKnown RBP2.94□□□□□ -1.94
TRL1YJL087C GYP5Q12344 894 aa2.94□□□□□ -1.94
TRL1YJL087C SEN54Q02825 467 aaPredicted RBP2.93□□□□□ -1.94
TRL1YJL087C ERG12P07277 443 aa2.93□□□□□ -1.94
TRL1YJL087C VMA1P17255 1071 aaKnown RBP2.93□□□□□ -1.94
TRL1YJL087C KTR1P27810 393 aaKnown RBP2.93□□□□□ -1.94
TRL1YJL087C HEM3P28789 327 aa2.93□□□□□ -1.94
TRL1YJL087C STS1P38637 319 aa2.93□□□□□ -1.94
TRL1YJL087C RPP1BP10622 106 aaKnown RBP2.92□□□□□ -1.94
TRL1YJL087C TTI1P36097 1038 aa2.92□□□□□ -1.94
TRL1YJL087C TIF11P38912 153 aaKnown RBP2.92□□□□□ -1.94
TRL1YJL087C HTA1P04911 132 aaKnown RBP2.92□□□□□ -1.94
TRL1YJL087C HTA2P04912 132 aa2.92□□□□□ -1.94
TRL1YJL087C CPS1P27614 576 aa2.92□□□□□ -1.94
TRL1YJL087C PTC3P34221 468 aaKnown RBP2.92□□□□□ -1.94
TRL1YJL087C ULI1P43604 169 aa2.92□□□□□ -1.94
TRL1YJL087C BMT6Q12291 365 aa2.92□□□□□ -1.94
TRL1YJL087C YBL029C-AQ3E756 94 aa2.92□□□□□ -1.94
TRL1YJL087C PSE1P32337 1089 aaKnown RBP2.91□□□□□ -1.94
TRL1YJL087C RRN6P32786 894 aa2.91□□□□□ -1.94
TRL1YJL087C SET4P42948 560 aa2.91□□□□□ -1.94
TRL1YJL087C CDC3P32457 520 aaKnown RBP2.91□□□□□ -1.94
TRL1YJL087C SSF1P38789 453 aaPredicted RBP2.91□□□□□ -1.94
TRL1YJL087C MET10P39692 1035 aa2.91□□□□□ -1.94
TRL1YJL087C YOL036WQ08206 761 aa2.91□□□□□ -1.94
TRL1YJL087C VNX1P42839 908 aa2.9□□□□□ -1.95
TRL1YJL087C YLR326WQ06170 240 aaKnown RBP2.9□□□□□ -1.95
TRL1YJL087C GUT1P32190 709 aa2.89□□□□□ -1.95
TRL1YJL087C RTG2P32608 588 aaKnown RBP2.89□□□□□ -1.95
TRL1YJL087C DCW1P36091 449 aa2.89□□□□□ -1.95
TRL1YJL087C KIC1P38692 1080 aa2.89□□□□□ -1.95
TRL1YJL087C VHR2P40041 505 aa2.89□□□□□ -1.95
TRL1YJL087C RPL34AP87262 121 aaPredicted RBP2.89□□□□□ -1.95
TRL1YJL087C SAM3Q08986 587 aa2.89□□□□□ -1.95
TRL1YJL087C PUP1P25043 261 aa2.88□□□□□ -1.95
TRL1YJL087C FKH1P40466 484 aa2.88□□□□□ -1.95
TRL1YJL087C JIP4Q03361 876 aa2.88□□□□□ -1.95
TRL1YJL087C TYW1Q08960 810 aaKnown RBP2.88□□□□□ -1.95
TRL1YJL087C SUP45P12385 437 aaKnown RBP2.88□□□□□ -1.95
TRL1YJL087C BIO2P32451 375 aa2.88□□□□□ -1.95
TRL1YJL087C RPL34BP40525 121 aaKnown RBP2.88□□□□□ -1.95
TRL1YJL087C YPR204WQ08995 1032 aa2.88□□□□□ -1.95
TRL1YJL087C YML083CQ04526 418 aa2.87□□□□□ -1.95
TRL1YJL087C HAT1Q12341 374 aa2.87□□□□□ -1.95
TRL1YJL087C CSE4P36012 229 aa2.87□□□□□ -1.95
TRL1YJL087C YBL036CP38197 257 aa2.87□□□□□ -1.95
TRL1YJL087C OCA5P38738 679 aa2.87□□□□□ -1.95
TRL1YJL087C TEA1P47988 759 aa2.87□□□□□ -1.95
TRL1YJL087C YNL035CP53962 389 aaKnown RBP2.87□□□□□ -1.95
TRL1YJL087C PEX29Q03370 554 aa2.87□□□□□ -1.95
TRL1YJL087C PCS60P38137 543 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
TRL1YJL087C YNL108CP53929 270 aa2.86□□□□□ -1.95
TRL1YJL087C YTA7P40340 1379 aa2.86□□□□□ -1.95
TRL1YJL087C RGR1P19263 1082 aa2.85□□□□□ -1.95
TRL1YJL087C DOS2P54858 310 aa2.85□□□□□ -1.95
TRL1YJL087C MRX10Q05648 414 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms