RNA–Protein interactions for RNA: YHR171W

ATG7, Transcript of Autophagy-related protein and dual specificity member of the E1 family, yeastyeast

Gene ATG7, Length 1,893 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG7YHR171W DOS2P54858 310 aa7.99□□□□□ -1.13
ATG7YHR171W HEM3P28789 327 aa7.98□□□□□ -1.13
ATG7YHR171W OCA5P38738 679 aa7.98□□□□□ -1.13
ATG7YHR171W YJL007CP47080 104 aa7.98□□□□□ -1.13
ATG7YHR171W TSR3Q12094 313 aaKnown RBP7.98□□□□□ -1.13
ATG7YHR171W LAM6Q08001 693 aa7.96□□□□□ -1.13
ATG7YHR171W MRM1P25270 412 aa7.95□□□□□ -1.14
ATG7YHR171W CDC3P32457 520 aaKnown RBP7.95□□□□□ -1.14
ATG7YHR171W PRY3P47033 881 aa7.95□□□□□ -1.14
ATG7YHR171W AAD16Q02895 342 aa7.95□□□□□ -1.14
ATG7YHR171W NOB1Q08444 459 aaKnown RBP7.95□□□□□ -1.14
ATG7YHR171W CPS1P27614 576 aa7.94□□□□□ -1.14
ATG7YHR171W DCD1P06773 312 aa7.94□□□□□ -1.14
ATG7YHR171W ERG12P07277 443 aa7.94□□□□□ -1.14
ATG7YHR171W COQ8P27697 501 aa7.93□□□□□ -1.14
ATG7YHR171W COX6P00427 148 aa7.92□□□□□ -1.14
ATG7YHR171W SWE1P32944 819 aa7.92□□□□□ -1.14
ATG7YHR171W NUG1P40010 520 aaKnown RBP7.92□□□□□ -1.14
ATG7YHR171W BBC1P47068 1157 aa7.92□□□□□ -1.14
ATG7YHR171W RPL34AP87262 121 aaPredicted RBP7.92□□□□□ -1.14
ATG7YHR171W TIF1P10081 395 aaKnown RBP7.91□□□□□ -1.14
ATG7YHR171W SSA2P10592 639 aaKnown RBP7.9□□□□□ -1.14
ATG7YHR171W TTI1P36097 1038 aa7.9□□□□□ -1.14
ATG7YHR171W RTG3P38165 486 aa7.9□□□□□ -1.14
ATG7YHR171W NOP53Q12080 455 aaKnown RBP7.87□□□□□ -1.15
ATG7YHR171W CSN12P47130 423 aa7.86□□□□□ -1.15
ATG7YHR171W HAT1Q12341 374 aa7.85□□□□□ -1.15
ATG7YHR171W RPL34BP40525 121 aaKnown RBP7.84□□□□□ -1.15
ATG7YHR171W ALD4P46367 519 aaKnown RBP7.84□□□□□ -1.15
ATG7YHR171W RTS3P53289 263 aa7.84□□□□□ -1.15
ATG7YHR171W BCH2P36122 765 aa7.83□□□□□ -1.16
ATG7YHR171W YJR008WP47085 338 aa7.83□□□□□ -1.16
ATG7YHR171W YML083CQ04526 418 aa7.83□□□□□ -1.16
ATG7YHR171W ITT1Q04638 464 aa7.83□□□□□ -1.16
ATG7YHR171W YPR204WQ08995 1032 aa7.83□□□□□ -1.16
ATG7YHR171W ALD2P47771 506 aa7.82□□□□□ -1.16
ATG7YHR171W IPL1P38991 367 aa7.81□□□□□ -1.16
ATG7YHR171W YAF9P53930 226 aa7.81□□□□□ -1.16
ATG7YHR171W FPR4Q06205 392 aaPredicted RBP7.81□□□□□ -1.16
ATG7YHR171W BIO2P32451 375 aa7.81□□□□□ -1.16
ATG7YHR171W KTR1P27810 393 aaKnown RBP7.8□□□□□ -1.16
ATG7YHR171W ASF1P32447 279 aa7.79□□□□□ -1.16
ATG7YHR171W EDS1P38073 919 aa7.79□□□□□ -1.16
ATG7YHR171W PUP1P25043 261 aa7.79□□□□□ -1.16
ATG7YHR171W UBP14P38237 781 aaKnown RBP7.79□□□□□ -1.16
ATG7YHR171W RTG2P32608 588 aaKnown RBP7.78□□□□□ -1.16
ATG7YHR171W VPS29P38759 282 aa7.78□□□□□ -1.16
ATG7YHR171W SUB1P54000 292 aaKnown RBP7.78□□□□□ -1.16
ATG7YHR171W KEX1P09620 729 aa7.77□□□□□ -1.17
ATG7YHR171W NMD2P38798 1089 aaKnown RBP7.77□□□□□ -1.17
ATG7YHR171W RRP15Q06511 250 aaPredicted RBP7.77□□□□□ -1.17
ATG7YHR171W CST6P40535 587 aa7.77□□□□□ -1.17
ATG7YHR171W EPS1P40557 701 aa7.77□□□□□ -1.17
ATG7YHR171W YDR090CQ03193 310 aa7.75□□□□□ -1.17
ATG7YHR171W NNF1P47149 201 aa7.75□□□□□ -1.17
ATG7YHR171W YBL036CP38197 257 aa7.74□□□□□ -1.17
ATG7YHR171W TPO2P53283 614 aa7.74□□□□□ -1.17
ATG7YHR171W STM1P39015 273 aaKnown RBP7.73□□□□□ -1.17
ATG7YHR171W VPS72Q03388 795 aa7.73□□□□□ -1.17
ATG7YHR171W MIF2P35201 549 aa7.72□□□□□ -1.17
ATG7YHR171W OSW7P43611 510 aa7.72□□□□□ -1.17
ATG7YHR171W CDC27P38042 758 aa7.7□□□□□ -1.18
ATG7YHR171W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
ATG7YHR171W YNL108CP53929 270 aa7.7□□□□□ -1.18
ATG7YHR171W UBX5Q06682 500 aa7.7□□□□□ -1.18
ATG7YHR171W ATE1P16639 503 aa7.7□□□□□ -1.18
ATG7YHR171W PSE1P32337 1089 aaKnown RBP7.7□□□□□ -1.18
ATG7YHR171W TYW1Q08960 810 aaKnown RBP7.7□□□□□ -1.18
ATG7YHR171W SEC20P28791 383 aa7.69□□□□□ -1.18
ATG7YHR171W BDF1P35817 686 aa7.69□□□□□ -1.18
ATG7YHR171W RNH70P53331 553 aa7.69□□□□□ -1.18
ATG7YHR171W GIN4Q12263 1142 aa7.69□□□□□ -1.18
ATG7YHR171W YBL113CQ7M4S9 792 aa7.68□□□□□ -1.18
ATG7YHR171W MSC6Q08818 692 aaKnown RBP7.68□□□□□ -1.18
ATG7YHR171W SUP45P12385 437 aaKnown RBP7.67□□□□□ -1.18
ATG7YHR171W BUD21Q08492 214 aaPredicted RBP7.67□□□□□ -1.18
ATG7YHR171W VHR2P40041 505 aa7.66□□□□□ -1.18
ATG7YHR171W SVF1Q05515 481 aa7.66□□□□□ -1.18
ATG7YHR171W ENO1P00924 437 aaKnown RBP7.65□□□□□ -1.18
ATG7YHR171W ERP5P38819 212 aa7.65□□□□□ -1.18
ATG7YHR171W TOM20P35180 183 aa7.64□□□□□ -1.19
ATG7YHR171W MAG2Q06436 670 aaKnown RBP7.64□□□□□ -1.19
ATG7YHR171W YOL098CQ12496 1037 aa7.64□□□□□ -1.19
ATG7YHR171W TGL4P36165 910 aa7.64□□□□□ -1.19
ATG7YHR171W STS1P38637 319 aa7.64□□□□□ -1.19
ATG7YHR171W POL32P47110 350 aa7.64□□□□□ -1.19
ATG7YHR171W MDG1P53885 366 aa7.64□□□□□ -1.19
ATG7YHR171W MRX10Q05648 414 aa7.64□□□□□ -1.19
ATG7YHR171W PTC3P34221 468 aaKnown RBP7.63□□□□□ -1.19
ATG7YHR171W SIS2P36024 562 aa7.63□□□□□ -1.19
ATG7YHR171W PDR1P12383 1068 aa7.62□□□□□ -1.19
ATG7YHR171W CSE4P36012 229 aa7.62□□□□□ -1.19
ATG7YHR171W YLR326WQ06170 240 aaKnown RBP7.62□□□□□ -1.19
ATG7YHR171W STB3Q12427 513 aa7.62□□□□□ -1.19
ATG7YHR171W ENO2P00925 437 aaKnown RBP7.61□□□□□ -1.19
ATG7YHR171W WHI5Q12416 295 aa7.61□□□□□ -1.19
ATG7YHR171W TEA1P47988 759 aa7.6□□□□□ -1.19
ATG7YHR171W MAK16P10962 306 aaPredicted RBP7.6□□□□□ -1.19
ATG7YHR171W RAD59Q12223 238 aa7.6□□□□□ -1.19
ATG7YHR171W TRL1P09880 827 aaKnown RBP7.59□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms