RNA–Protein interactions for RNA: YHR135C

YCK1, Transcript of Palmitoylated plasma membrane-bound casein kinase I (CK1) isoform, yeastyeast

Gene YCK1, Length 1,617 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK1YHR135C TY1B-GR3Q12316 1755 aa9.43□□□□□ -0.9
YCK1YHR135C TY1B-ORQ92393 1755 aa9.43□□□□□ -0.9
YCK1YHR135C TY1B-HO13535 1793 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-DR5P0C2I2 1755 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-DR6P0C2I3 1755 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-LR2P0C2I5 1755 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-LR3P0C2I6 1755 aaKnown RBP9.42□□□□□ -0.9
YCK1YHR135C TY1B-PR1P0C2I9 1755 aaKnown RBP9.42□□□□□ -0.9
YCK1YHR135C TY1B-PR2P0C2J0 1756 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-PR3P0C2J1 1755 aaKnown RBP9.42□□□□□ -0.9
YCK1YHR135C TY1B-JR1P47098 1755 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-ML2Q03434 1755 aaKnown RBP9.42□□□□□ -0.9
YCK1YHR135C TY1B-ER1Q03612 1755 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-ML1Q04711 1755 aaKnown RBP9.42□□□□□ -0.9
YCK1YHR135C TY1B-GR2Q12269 1755 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-OLQ12273 1755 aa9.42□□□□□ -0.9
YCK1YHR135C TY1B-PLQ12414 1755 aaKnown RBP9.42□□□□□ -0.9
YCK1YHR135C YTA7P40340 1379 aa9.41□□□□□ -0.9
YCK1YHR135C SMC4Q12267 1418 aa9.41□□□□□ -0.9
YCK1YHR135C MYO4P32492 1471 aa9.39□□□□□ -0.91
YCK1YHR135C CDC25P04821 1589 aa9.34□□□□□ -0.91
YCK1YHR135C MLP2P40457 1679 aa9.31□□□□□ -0.92
YCK1YHR135C BUD31P25337 157 aaPredicted RBP9.31□□□□□ -0.92
YCK1YHR135C SAS10Q12136 610 aaPredicted RBP9.31□□□□□ -0.92
YCK1YHR135C ESC1Q03661 1658 aaKnown RBP9.3□□□□□ -0.92
YCK1YHR135C PSD2P53037 1138 aaKnown RBP9.3□□□□□ -0.92
YCK1YHR135C SNQ2P32568 1501 aaKnown RBP9.28□□□□□ -0.92
YCK1YHR135C RQC2Q12532 1038 aaKnown RBP9.27□□□□□ -0.92
YCK1YHR135C SPP41P38904 1435 aa9.27□□□□□ -0.93
YCK1YHR135C TY1B-JR2P47100 1755 aaKnown RBP9.26□□□□□ -0.93
YCK1YHR135C TY1B-ER2Q03619 1755 aa9.26□□□□□ -0.93
YCK1YHR135C TY1B-MR1Q04214 1755 aa9.26□□□□□ -0.93
YCK1YHR135C TY1B-MR2Q04670 1755 aaKnown RBP9.26□□□□□ -0.93
YCK1YHR135C TY1B-LR1Q12088 1755 aaKnown RBP9.26□□□□□ -0.93
YCK1YHR135C TY1B-NL1Q12112 1755 aa9.26□□□□□ -0.93
YCK1YHR135C TY1B-GR1Q12141 1755 aa9.26□□□□□ -0.93
YCK1YHR135C TY1B-BLQ12490 1755 aa9.26□□□□□ -0.93
YCK1YHR135C UBP9P39967 754 aa9.24□□□□□ -0.93
YCK1YHR135C MGA2P40578 1113 aa9.23□□□□□ -0.93
YCK1YHR135C PAN1P32521 1480 aa9.23□□□□□ -0.93
YCK1YHR135C VTH1P40438 1549 aa9.23□□□□□ -0.93
YCK1YHR135C VTH2P40890 1549 aa9.23□□□□□ -0.93
YCK1YHR135C NSR1P27476 414 aaKnown RBP RIP-Chip data9.23□□□□□ -0.93not detected
YCK1YHR135C ULS1Q08562 1619 aa9.22□□□□□ -0.93
YCK1YHR135C PDR15Q04182 1529 aaKnown RBP9.22□□□□□ -0.93
YCK1YHR135C RPA190P10964 1664 aaKnown RBP9.21□□□□□ -0.94
YCK1YHR135C YOR238WQ08634 303 aa9.2□□□□□ -0.94
YCK1YHR135C STH1P32597 1359 aa9.2□□□□□ -0.94
YCK1YHR135C DNF1P32660 1571 aa9.19□□□□□ -0.94
YCK1YHR135C TSC11P40061 1430 aa9.18□□□□□ -0.94
YCK1YHR135C YAP5P40574 245 aa9.18□□□□□ -0.94
YCK1YHR135C NTE1Q04958 1679 aa9.17□□□□□ -0.94
YCK1YHR135C MST1P07236 462 aa9.16□□□□□ -0.94
YCK1YHR135C MRM1P25270 412 aa9.16□□□□□ -0.94
YCK1YHR135C TRM732Q03496 1420 aa9.14□□□□□ -0.95
YCK1YHR135C RPO21P04050 1733 aaKnown RBP9.14□□□□□ -0.95
YCK1YHR135C CST9Q06032 482 aa9.11□□□□□ -0.95
YCK1YHR135C TAF7Q05021 590 aa9.09□□□□□ -0.95
YCK1YHR135C SNT2P53127 1403 aa9.08□□□□□ -0.96
YCK1YHR135C IFH1P39520 1085 aa9.08□□□□□ -0.96
YCK1YHR135C GEA1P47102 1408 aaPredicted RBP9.08□□□□□ -0.96
YCK1YHR135C TY3B-GQ99315 1547 aa9.07□□□□□ -0.96
YCK1YHR135C YBT1P32386 1661 aa9.05□□□□□ -0.96
YCK1YHR135C RTG3P38165 486 aa9.05□□□□□ -0.96
YCK1YHR135C YRF1-1P0CX20 1796 aa9.03□□□□□ -0.96
YCK1YHR135C YRF1-5P0CX21 1796 aa9.03□□□□□ -0.96
YCK1YHR135C YRF1-8P0CX22 1796 aa9.03□□□□□ -0.96
YCK1YHR135C IRC20Q06554 1556 aa9.03□□□□□ -0.96
YCK1YHR135C NUP170P38181 1502 aa9.02□□□□□ -0.97
YCK1YHR135C NUP159P40477 1460 aa9.01□□□□□ -0.97
YCK1YHR135C GEA2P39993 1459 aaKnown RBP9□□□□□ -0.97
YCK1YHR135C IKI3Q06706 1349 aaKnown RBP8.99□□□□□ -0.97
YCK1YHR135C GTT3P39996 337 aa8.98□□□□□ -0.97
YCK1YHR135C YMR1P47147 688 aaKnown RBP RIP-Chip data8.97□□□□□ -0.97not detected
YCK1YHR135C SPO14P36126 1683 aa8.96□□□□□ -0.98
YCK1YHR135C SSM4P40318 1319 aa8.94□□□□□ -0.98
YCK1YHR135C VPS15P22219 1454 aa8.94□□□□□ -0.98
YCK1YHR135C VPS29P38759 282 aa8.94□□□□□ -0.98
YCK1YHR135C RTT106P40161 455 aa8.94□□□□□ -0.98
YCK1YHR135C YBL029C-AQ3E756 94 aa8.93□□□□□ -0.98
YCK1YHR135C MET5P47169 1442 aa8.92□□□□□ -0.98
YCK1YHR135C SIS1P25294 352 aaKnown RBP8.91□□□□□ -0.98
YCK1YHR135C GDB1Q06625 1536 aa8.9□□□□□ -0.98
YCK1YHR135C PIB1Q06651 286 aa8.9□□□□□ -0.99
YCK1YHR135C DBP1P24784 617 aaKnown RBP8.89□□□□□ -0.99
YCK1YHR135C PDR12Q02785 1511 aa8.89□□□□□ -0.99
YCK1YHR135C ARO1P08566 1588 aaKnown RBP8.89□□□□□ -0.99
YCK1YHR135C PDR10P51533 1564 aa8.89□□□□□ -0.99
YCK1YHR135C VNX1P42839 908 aa8.88□□□□□ -0.99
YCK1YHR135C WSC3Q12215 556 aa8.88□□□□□ -0.99
YCK1YHR135C CAT8P39113 1433 aa8.88□□□□□ -0.99
YCK1YHR135C BUD3P25558 1636 aa8.85□□□□□ -0.99
YCK1YHR135C RCR1P38212 213 aa8.84□□□□□ -0.99
YCK1YHR135C SPP1Q03012 353 aa8.84□□□□□ -0.99
YCK1YHR135C NUP157P40064 1391 aaKnown RBP8.83□□□□□ -1
YCK1YHR135C MET10P39692 1035 aa8.82□□□□□ -1
YCK1YHR135C YFR006WP43590 535 aa8.82□□□□□ -1
YCK1YHR135C STS1P38637 319 aa8.8□□□□□ -1
YCK1YHR135C MSB4Q12317 492 aa8.8□□□□□ -1
YCK1YHR135C TIF11P38912 153 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms