RNA–Protein interactions for RNA: YGR296W

YRF1-3, Transcript of Helicase encoded by the Y' element of subtelomeric regions, yeastyeast

Gene YRF1-3, Length 5,580 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YRF1-3YGR296W DRS2P39524 1355 aa9.77□□□□□ -0.85
YRF1-3YGR296W SSM4P40318 1319 aa9.76□□□□□ -0.85
YRF1-3YGR296W SRB8P25648 1427 aa9.76□□□□□ -0.85
YRF1-3YGR296W CDC45Q08032 650 aa9.75□□□□□ -0.85
YRF1-3YGR296W YOR1P53049 1477 aa9.74□□□□□ -0.85
YRF1-3YGR296W CSE4P36012 229 aa9.74□□□□□ -0.85
YRF1-3YGR296W MMS1Q06211 1407 aa9.73□□□□□ -0.85
YRF1-3YGR296W SIN3P22579 1536 aa9.73□□□□□ -0.85
YRF1-3YGR296W SCC2Q04002 1493 aa9.73□□□□□ -0.85
YRF1-3YGR296W RNA1P11745 407 aaKnown RBP9.72□□□□□ -0.85
YRF1-3YGR296W MHP1P43638 1398 aa9.71□□□□□ -0.85
YRF1-3YGR296W YDL144CQ07589 356 aa9.71□□□□□ -0.85
YRF1-3YGR296W RPC31P17890 251 aa9.71□□□□□ -0.86
YRF1-3YGR296W PDI1P17967 522 aaKnown RBP9.71□□□□□ -0.86
YRF1-3YGR296W YJL181WP46987 611 aa9.71□□□□□ -0.86
YRF1-3YGR296W SSK2P53599 1579 aa9.7□□□□□ -0.86
YRF1-3YGR296W LEO1P38439 464 aa9.69□□□□□ -0.86
YRF1-3YGR296W BUD27P43573 796 aaKnown RBP RIP-Chip data9.69□□□□□ -0.86not detected
YRF1-3YGR296W SNQ2P32568 1501 aaKnown RBP9.67□□□□□ -0.86
YRF1-3YGR296W BDP1P46678 594 aa9.67□□□□□ -0.86
YRF1-3YGR296W ENP2P48234 707 aaKnown RBP9.67□□□□□ -0.86
YRF1-3YGR296W CAT8P39113 1433 aa9.66□□□□□ -0.86
YRF1-3YGR296W SUP35P05453 685 aaKnown RBP9.66□□□□□ -0.86
YRF1-3YGR296W PKH1Q03407 766 aa9.66□□□□□ -0.86
YRF1-3YGR296W YBR287WP38355 427 aa9.66□□□□□ -0.86
YRF1-3YGR296W VPS27P40343 622 aaKnown RBP9.66□□□□□ -0.86
YRF1-3YGR296W TPM1P17536 199 aaKnown RBP9.65□□□□□ -0.86
YRF1-3YGR296W CAB1Q04430 367 aa9.65□□□□□ -0.86
YRF1-3YGR296W VPS15P22219 1454 aa9.65□□□□□ -0.86
YRF1-3YGR296W NUP159P40477 1460 aa9.64□□□□□ -0.87
YRF1-3YGR296W NCB2Q92317 146 aa9.63□□□□□ -0.87
YRF1-3YGR296W DPS1P04802 557 aaKnown RBP9.61□□□□□ -0.87
YRF1-3YGR296W YAP3P38749 330 aa9.61□□□□□ -0.87
YRF1-3YGR296W GAS4Q08271 471 aa9.61□□□□□ -0.87
YRF1-3YGR296W ECM16Q04217 1267 aaKnown RBP9.61□□□□□ -0.87
YRF1-3YGR296W YGL081WP53156 320 aa9.6□□□□□ -0.87
YRF1-3YGR296W ESP1Q03018 1630 aa9.59□□□□□ -0.87
YRF1-3YGR296W DAL5P15365 543 aa9.59□□□□□ -0.87
YRF1-3YGR296W LEU2P04173 364 aaPredicted RBP9.57□□□□□ -0.88
YRF1-3YGR296W RTG3P38165 486 aa9.57□□□□□ -0.88
YRF1-3YGR296W ESC2Q06340 456 aa9.57□□□□□ -0.88
YRF1-3YGR296W CFT1Q06632 1357 aaKnown RBP9.56□□□□□ -0.88
YRF1-3YGR296W TPD3P31383 635 aa9.56□□□□□ -0.88
YRF1-3YGR296W RPO31P04051 1460 aa9.55□□□□□ -0.88
YRF1-3YGR296W GEA2P39993 1459 aaKnown RBP9.55□□□□□ -0.88
YRF1-3YGR296W RPP0P05317 312 aaKnown RBP9.55□□□□□ -0.88
YRF1-3YGR296W NSE3Q05541 303 aa9.54□□□□□ -0.88
YRF1-3YGR296W NMD2P38798 1089 aaKnown RBP9.54□□□□□ -0.88
YRF1-3YGR296W ARP5P53946 755 aa9.54□□□□□ -0.88
YRF1-3YGR296W RCM1P53972 490 aa9.54□□□□□ -0.88
YRF1-3YGR296W GRX4P32642 244 aa9.53□□□□□ -0.88
YRF1-3YGR296W PDR15Q04182 1529 aaKnown RBP9.52□□□□□ -0.89
YRF1-3YGR296W PUF6Q04373 656 aaKnown RBP9.51□□□□□ -0.89
YRF1-3YGR296W IPL1P38991 367 aa9.51□□□□□ -0.89
YRF1-3YGR296W YCF1P39109 1515 aaKnown RBP9.51□□□□□ -0.89
YRF1-3YGR296W BUB1P41695 1021 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
YRF1-3YGR296W MPP10P47083 593 aaKnown RBP9.5□□□□□ -0.89
YRF1-3YGR296W ATG13Q06628 738 aa9.5□□□□□ -0.89
YRF1-3YGR296W ZDS1P50111 915 aaKnown RBP9.5□□□□□ -0.89
YRF1-3YGR296W RRP8P38961 392 aaKnown RBP9.49□□□□□ -0.89
YRF1-3YGR296W FPR4Q06205 392 aaPredicted RBP9.49□□□□□ -0.89
YRF1-3YGR296W PEX14P53112 341 aa9.49□□□□□ -0.89
YRF1-3YGR296W ESF1Q06344 628 aaKnown RBP9.49□□□□□ -0.89
YRF1-3YGR296W AOS1Q06624 347 aa9.48□□□□□ -0.89
YRF1-3YGR296W ALD4P46367 519 aaKnown RBP9.48□□□□□ -0.89
YRF1-3YGR296W MTR4P47047 1073 aaKnown RBP9.47□□□□□ -0.89
YRF1-3YGR296W MEC3Q02574 474 aa9.47□□□□□ -0.89
YRF1-3YGR296W RFC1P38630 861 aaKnown RBP9.46□□□□□ -0.89
YRF1-3YGR296W SSA2P10592 639 aaKnown RBP9.46□□□□□ -0.9
YRF1-3YGR296W VPS64Q03944 604 aa9.46□□□□□ -0.9
YRF1-3YGR296W VTH1P40438 1549 aa9.46□□□□□ -0.9
YRF1-3YGR296W VTH2P40890 1549 aa9.46□□□□□ -0.9
YRF1-3YGR296W SEN54Q02825 467 aaPredicted RBP9.46□□□□□ -0.9
YRF1-3YGR296W YMR196WQ04336 1088 aa9.45□□□□□ -0.9
YRF1-3YGR296W YPR148CQ06523 435 aa9.45□□□□□ -0.9
YRF1-3YGR296W RRI2Q12348 645 aa9.45□□□□□ -0.9
YRF1-3YGR296W RRT14P40470 206 aa9.43□□□□□ -0.9
YRF1-3YGR296W YNG2P38806 282 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W RVB2Q12464 471 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W RPS24AP0CX31 135 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W RPS24BP0CX32 135 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W HSP104P31539 908 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W PRP40P33203 583 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W EBP2P36049 427 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W VPS24P36095 224 aaKnown RBP9.42□□□□□ -0.9
YRF1-3YGR296W SVF1Q05515 481 aa9.42□□□□□ -0.9
YRF1-3YGR296W RTC1Q08281 1341 aa9.42□□□□□ -0.9
YRF1-3YGR296W PRP45P28004 379 aaPredicted RBP9.41□□□□□ -0.9
YRF1-3YGR296W IQG1Q12280 1495 aa9.41□□□□□ -0.9
YRF1-3YGR296W PDR10P51533 1564 aa9.41□□□□□ -0.9
YRF1-3YGR296W IOC4Q04213 475 aa9.41□□□□□ -0.9
YRF1-3YGR296W MAK10Q02197 733 aa9.4□□□□□ -0.9
YRF1-3YGR296W JIP3O13555 125 aa9.4□□□□□ -0.9
YRF1-3YGR296W SNU66Q12420 587 aaPredicted RBP9.4□□□□□ -0.9
YRF1-3YGR296W VAS1P07806 1104 aaKnown RBP9.39□□□□□ -0.91
YRF1-3YGR296W CLC1P17891 233 aa9.39□□□□□ -0.91
YRF1-3YGR296W LAM6Q08001 693 aa9.39□□□□□ -0.91
YRF1-3YGR296W GYP7P48365 746 aa9.39□□□□□ -0.91
YRF1-3YGR296W PEP1P32319 1579 aa9.38□□□□□ -0.91
YRF1-3YGR296W ITT1Q04638 464 aa9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms