RNA–Protein interactions for RNA: YGR178C

PBP1, Transcript of Component of glucose deprivation induced stress granules, yeastyeast

Gene PBP1, Length 2,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP1YGR178C YFR016CP43597 1233 aaKnown RBP12.84□□□□□ -0.35
PBP1YGR178C CLC1P17891 233 aa12.84□□□□□ -0.35
PBP1YGR178C CDC25P04821 1589 aa12.84□□□□□ -0.35
PBP1YGR178C MHP1P43638 1398 aa12.83□□□□□ -0.36
PBP1YGR178C TY1B-BRQ12193 1756 aa12.83□□□□□ -0.36
PBP1YGR178C TY1B-GR3Q12316 1755 aa12.83□□□□□ -0.36
PBP1YGR178C TY1B-ORQ92393 1755 aa12.83□□□□□ -0.36
PBP1YGR178C YBT1P32386 1661 aa12.82□□□□□ -0.36
PBP1YGR178C RQC2Q12532 1038 aaKnown RBP12.81□□□□□ -0.36
PBP1YGR178C RPC31P17890 251 aa12.8□□□□□ -0.36
PBP1YGR178C ESC1Q03661 1658 aaKnown RBP12.79□□□□□ -0.36
PBP1YGR178C OPY1P38271 328 aa12.77□□□□□ -0.36
PBP1YGR178C NOP7P53261 605 aaKnown RBP12.76□□□□□ -0.37
PBP1YGR178C TY1B-HO13535 1793 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-DR5P0C2I2 1755 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-DR6P0C2I3 1755 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-LR2P0C2I5 1755 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-LR3P0C2I6 1755 aaKnown RBP12.75□□□□□ -0.37
PBP1YGR178C TY1B-PR1P0C2I9 1755 aaKnown RBP12.75□□□□□ -0.37
PBP1YGR178C TY1B-PR2P0C2J0 1756 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-PR3P0C2J1 1755 aaKnown RBP12.75□□□□□ -0.37
PBP1YGR178C TY1B-JR1P47098 1755 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-ML2Q03434 1755 aaKnown RBP12.75□□□□□ -0.37
PBP1YGR178C TY1B-ER1Q03612 1755 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-ML1Q04711 1755 aaKnown RBP12.75□□□□□ -0.37
PBP1YGR178C TY1B-GR2Q12269 1755 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-OLQ12273 1755 aa12.75□□□□□ -0.37
PBP1YGR178C TY1B-PLQ12414 1755 aaKnown RBP12.75□□□□□ -0.37
PBP1YGR178C GCN2P15442 1659 aa12.72□□□□□ -0.37
PBP1YGR178C VTH1P40438 1549 aa12.71□□□□□ -0.38
PBP1YGR178C VTH2P40890 1549 aa12.71□□□□□ -0.38
PBP1YGR178C EAF7P53911 425 aaKnown RBP12.7□□□□□ -0.38
PBP1YGR178C SNT2P53127 1403 aa12.67□□□□□ -0.38
PBP1YGR178C IRC20Q06554 1556 aa12.64□□□□□ -0.39
PBP1YGR178C NST1P53935 1240 aa12.64□□□□□ -0.39
PBP1YGR178C RPA190P10964 1664 aaKnown RBP12.63□□□□□ -0.39
PBP1YGR178C TCB2P48231 1178 aa12.63□□□□□ -0.39
PBP1YGR178C PDS5Q04264 1277 aa12.63□□□□□ -0.39
PBP1YGR178C MNN4P36044 1178 aa12.62□□□□□ -0.39
PBP1YGR178C CAT8P39113 1433 aa12.6□□□□□ -0.39
PBP1YGR178C GDB1Q06625 1536 aa12.6□□□□□ -0.39
PBP1YGR178C MET5P47169 1442 aa12.58□□□□□ -0.4
PBP1YGR178C GEA2P39993 1459 aaKnown RBP12.58□□□□□ -0.4
PBP1YGR178C TY1B-JR2P47100 1755 aaKnown RBP12.57□□□□□ -0.4
PBP1YGR178C TY1B-ER2Q03619 1755 aa12.57□□□□□ -0.4
PBP1YGR178C TY1B-MR1Q04214 1755 aa12.57□□□□□ -0.4
PBP1YGR178C TY1B-MR2Q04670 1755 aaKnown RBP12.57□□□□□ -0.4
PBP1YGR178C TY1B-LR1Q12088 1755 aaKnown RBP12.57□□□□□ -0.4
PBP1YGR178C TY1B-NL1Q12112 1755 aa12.57□□□□□ -0.4
PBP1YGR178C TY1B-GR1Q12141 1755 aa12.57□□□□□ -0.4
PBP1YGR178C TY1B-BLQ12490 1755 aa12.57□□□□□ -0.4
PBP1YGR178C PDR5P33302 1511 aaKnown RBP12.57□□□□□ -0.4
PBP1YGR178C ARO1P08566 1588 aaKnown RBP12.57□□□□□ -0.4
PBP1YGR178C CKB1P43639 278 aa12.56□□□□□ -0.4
PBP1YGR178C FPR3P38911 411 aaKnown RBP12.56□□□□□ -0.4
PBP1YGR178C SNF7P39929 240 aaKnown RBP12.55□□□□□ -0.4
PBP1YGR178C RVB2Q12464 471 aaKnown RBP12.52□□□□□ -0.4
PBP1YGR178C IQG1Q12280 1495 aa12.51□□□□□ -0.41
PBP1YGR178C BUD21Q08492 214 aaPredicted RBP12.51□□□□□ -0.41
PBP1YGR178C LEO1P38439 464 aa12.5□□□□□ -0.41
PBP1YGR178C CDC45Q08032 650 aa12.5□□□□□ -0.41
PBP1YGR178C PAF1P38351 445 aa12.49□□□□□ -0.41
PBP1YGR178C VPS27P40343 622 aaKnown RBP12.48□□□□□ -0.41
PBP1YGR178C TY3B-IQ7LHG5 1498 aaKnown RBP12.48□□□□□ -0.41
PBP1YGR178C SIS2P36024 562 aa12.47□□□□□ -0.41
PBP1YGR178C MMS1Q06211 1407 aa12.46□□□□□ -0.42
PBP1YGR178C ROX1P25042 368 aa12.45□□□□□ -0.42
PBP1YGR178C YIR014WP40570 242 aa12.44□□□□□ -0.42
PBP1YGR178C RPP0P05317 312 aaKnown RBP12.42□□□□□ -0.42
PBP1YGR178C ABP1P15891 592 aaKnown RBP12.42□□□□□ -0.42
PBP1YGR178C NTE1Q04958 1679 aa12.41□□□□□ -0.42
PBP1YGR178C BUD3P25558 1636 aa12.4□□□□□ -0.42
PBP1YGR178C DJP1P40564 432 aa12.4□□□□□ -0.42
PBP1YGR178C PDR12Q02785 1511 aa12.4□□□□□ -0.42
PBP1YGR178C YRF1-1P0CX20 1796 aa12.4□□□□□ -0.42
PBP1YGR178C YRF1-5P0CX21 1796 aa12.4□□□□□ -0.42
PBP1YGR178C YRF1-8P0CX22 1796 aa12.4□□□□□ -0.42
PBP1YGR178C TAF5P38129 798 aa12.39□□□□□ -0.43
PBP1YGR178C KIP3P53086 805 aaKnown RBP12.37□□□□□ -0.43
PBP1YGR178C RPO21P04050 1733 aaKnown RBP12.37□□□□□ -0.43
PBP1YGR178C LTE1P07866 1435 aa12.37□□□□□ -0.43
PBP1YGR178C SLN1P39928 1220 aaPredicted RBP12.36□□□□□ -0.43
PBP1YGR178C YDL144CQ07589 356 aa12.36□□□□□ -0.43
PBP1YGR178C PCT1P13259 424 aa12.35□□□□□ -0.43
PBP1YGR178C YRB30P53107 440 aaPredicted RBP12.33□□□□□ -0.44
PBP1YGR178C YOR093CQ12275 1648 aa12.32□□□□□ -0.44
PBP1YGR178C SUI2P20459 304 aaKnown RBP12.3□□□□□ -0.44
PBP1YGR178C SPO14P36126 1683 aa12.29□□□□□ -0.44
PBP1YGR178C NUP157P40064 1391 aaKnown RBP12.28□□□□□ -0.44
PBP1YGR178C DNF2Q12675 1612 aa12.28□□□□□ -0.44
PBP1YGR178C AIM44Q99299 758 aa12.28□□□□□ -0.44
PBP1YGR178C YSP2Q06681 1438 aa12.25□□□□□ -0.45
PBP1YGR178C RTC1Q08281 1341 aa12.25□□□□□ -0.45
PBP1YGR178C BNI1P41832 1953 aa12.24□□□□□ -0.45
PBP1YGR178C DOP1Q03921 1698 aa12.24□□□□□ -0.45
PBP1YGR178C VPS24P36095 224 aaKnown RBP12.23□□□□□ -0.45
PBP1YGR178C RTG3P38165 486 aa12.23□□□□□ -0.45
PBP1YGR178C CTR9P89105 1077 aa12.23□□□□□ -0.45
PBP1YGR178C RAV1P47104 1357 aa12.23□□□□□ -0.45
PBP1YGR178C MSP1P28737 362 aa12.22□□□□□ -0.45
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms