RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W YJL007CP47080 104 aa9.58□□□□□ -0.88
SNU71YGR013W SSA4P22202 642 aaKnown RBP9.55□□□□□ -0.88
SNU71YGR013W NOP7P53261 605 aaKnown RBP9.55□□□□□ -0.88
SNU71YGR013W SSA2P10592 639 aaKnown RBP9.55□□□□□ -0.88
SNU71YGR013W PRY3P47033 881 aa9.53□□□□□ -0.88
SNU71YGR013W CSN12P47130 423 aa9.53□□□□□ -0.88
SNU71YGR013W STS1P38637 319 aa9.51□□□□□ -0.89
SNU71YGR013W YDR090CQ03193 310 aa9.49□□□□□ -0.89
SNU71YGR013W ERG12P07277 443 aa9.49□□□□□ -0.89
SNU71YGR013W SLD2P34252 453 aa9.49□□□□□ -0.89
SNU71YGR013W TIF1P10081 395 aaKnown RBP9.47□□□□□ -0.89
SNU71YGR013W UBP14P38237 781 aaKnown RBP9.47□□□□□ -0.89
SNU71YGR013W YMR1P47147 688 aaKnown RBP RIP-Chip data9.47□□□□□ -0.89not detected
SNU71YGR013W CPS1P27614 576 aa9.47□□□□□ -0.89
SNU71YGR013W SNU71P53207 620 aaKnown RBP9.47□□□□□ -0.89
SNU71YGR013W PTC3P34221 468 aaKnown RBP9.46□□□□□ -0.9
SNU71YGR013W VHR2P40041 505 aa9.45□□□□□ -0.9
SNU71YGR013W RPL34BP40525 121 aaKnown RBP9.44□□□□□ -0.9
SNU71YGR013W SCY1P53009 804 aa9.44□□□□□ -0.9
SNU71YGR013W YFR006WP43590 535 aa9.42□□□□□ -0.9
SNU71YGR013W NOB1Q08444 459 aaKnown RBP9.42□□□□□ -0.9
SNU71YGR013W KTR1P27810 393 aaKnown RBP9.42□□□□□ -0.9
SNU71YGR013W PAM1P37304 830 aaKnown RBP9.42□□□□□ -0.9
SNU71YGR013W RPL34AP87262 121 aaPredicted RBP9.42□□□□□ -0.9
SNU71YGR013W TTI1P36097 1038 aa9.41□□□□□ -0.9
SNU71YGR013W MON2P48563 1636 aaPredicted RBP9.41□□□□□ -0.9
SNU71YGR013W DBP1P24784 617 aaKnown RBP9.4□□□□□ -0.91
SNU71YGR013W PSE1P32337 1089 aaKnown RBP9.4□□□□□ -0.91
SNU71YGR013W CDC3P32457 520 aaKnown RBP9.4□□□□□ -0.91
SNU71YGR013W YPR204WQ08995 1032 aa9.39□□□□□ -0.91
SNU71YGR013W SSF1P38789 453 aaPredicted RBP9.38□□□□□ -0.91
SNU71YGR013W SEN54Q02825 467 aaPredicted RBP9.38□□□□□ -0.91
SNU71YGR013W MET10P39692 1035 aa9.38□□□□□ -0.91
SNU71YGR013W RRN6P32786 894 aa9.37□□□□□ -0.91
SNU71YGR013W BIO2P32451 375 aa9.36□□□□□ -0.91
SNU71YGR013W INO80P53115 1489 aa9.36□□□□□ -0.91
SNU71YGR013W YLR326WQ06170 240 aaKnown RBP9.36□□□□□ -0.91
SNU71YGR013W YBL036CP38197 257 aa9.35□□□□□ -0.91
SNU71YGR013W TYW1Q08960 810 aaKnown RBP9.35□□□□□ -0.91
SNU71YGR013W HEM3P28789 327 aa9.34□□□□□ -0.91
SNU71YGR013W RTG2P32608 588 aaKnown RBP9.34□□□□□ -0.91
SNU71YGR013W YML083CQ04526 418 aa9.31□□□□□ -0.92
SNU71YGR013W KIC1P38692 1080 aa9.3□□□□□ -0.92
SNU71YGR013W TEA1P47988 759 aa9.3□□□□□ -0.92
SNU71YGR013W HAT1Q12341 374 aa9.29□□□□□ -0.92
SNU71YGR013W YNL108CP53929 270 aa9.28□□□□□ -0.92
SNU71YGR013W PUP1P25043 261 aa9.28□□□□□ -0.92
SNU71YGR013W PCS60P38137 543 aaKnown RBP RIP-Chip data9.25□□□□□ -0.93not detected
SNU71YGR013W YOR238WQ08634 303 aa9.25□□□□□ -0.93
SNU71YGR013W RAD54P32863 898 aa9.23□□□□□ -0.93
SNU71YGR013W ORC6P38826 435 aa9.23□□□□□ -0.93
SNU71YGR013W MAP2P38174 421 aaKnown RBP9.23□□□□□ -0.93
SNU71YGR013W SUP45P12385 437 aaKnown RBP9.22□□□□□ -0.93
SNU71YGR013W YTA7P40340 1379 aa9.21□□□□□ -0.93
SNU71YGR013W CSE4P36012 229 aa9.21□□□□□ -0.94
SNU71YGR013W YGR273CP53329 174 aa9.21□□□□□ -0.94
SNU71YGR013W RAD59Q12223 238 aa9.21□□□□□ -0.94
SNU71YGR013W KEX1P09620 729 aa9.2□□□□□ -0.94
SNU71YGR013W ATH1P48016 1211 aa9.2□□□□□ -0.94
SNU71YGR013W ENO1P00924 437 aaKnown RBP9.19□□□□□ -0.94
SNU71YGR013W GUT1P32190 709 aa9.18□□□□□ -0.94
SNU71YGR013W IPL1P38991 367 aa9.18□□□□□ -0.94
SNU71YGR013W YCK3P39962 524 aa9.18□□□□□ -0.94
SNU71YGR013W RGR1P19263 1082 aa9.17□□□□□ -0.94
SNU71YGR013W NIS1P53939 407 aa9.17□□□□□ -0.94
SNU71YGR013W PKH3Q03306 898 aaPredicted RBP9.17□□□□□ -0.94
SNU71YGR013W HST2P53686 357 aa9.17□□□□□ -0.94
SNU71YGR013W ENO2P00925 437 aaKnown RBP9.16□□□□□ -0.94
SNU71YGR013W FPK1P53739 893 aa9.16□□□□□ -0.94
SNU71YGR013W ITT1Q04638 464 aa9.16□□□□□ -0.94
SNU71YGR013W MRX10Q05648 414 aa9.16□□□□□ -0.94
SNU71YGR013W GRE2Q12068 342 aaKnown RBP9.16□□□□□ -0.94
SNU71YGR013W UBP10P53874 792 aaPredicted RBP9.15□□□□□ -0.94
SNU71YGR013W ESS1P22696 170 aa9.15□□□□□ -0.95
SNU71YGR013W SLX5P32828 619 aaKnown RBP9.15□□□□□ -0.95
SNU71YGR013W OCA5P38738 679 aa9.15□□□□□ -0.95
SNU71YGR013W VMA1P17255 1071 aaKnown RBP9.14□□□□□ -0.95
SNU71YGR013W SIS2P36024 562 aa9.14□□□□□ -0.95
SNU71YGR013W TGL4P36165 910 aa9.14□□□□□ -0.95
SNU71YGR013W SCJ1P25303 377 aa9.13□□□□□ -0.95
SNU71YGR013W YDJ1P25491 409 aaKnown RBP9.13□□□□□ -0.95
SNU71YGR013W SOL3P38858 249 aa9.13□□□□□ -0.95
SNU71YGR013W MMP1Q12372 583 aa9.13□□□□□ -0.95
SNU71YGR013W BRN1P38170 754 aa9.13□□□□□ -0.95
SNU71YGR013W STM1P39015 273 aaKnown RBP9.13□□□□□ -0.95
SNU71YGR013W ALD2P47771 506 aa9.13□□□□□ -0.95
SNU71YGR013W PIB1Q06651 286 aa9.13□□□□□ -0.95
SNU71YGR013W CLB5P30283 435 aa9.12□□□□□ -0.95
SNU71YGR013W YJU3P28321 313 aa9.11□□□□□ -0.95
SNU71YGR013W ASF1P32447 279 aa9.11□□□□□ -0.95
SNU71YGR013W MVP1P40959 511 aaKnown RBP9.11□□□□□ -0.95
SNU71YGR013W YMR196WQ04336 1088 aa9.11□□□□□ -0.95
SNU71YGR013W RIM21P48565 533 aa9.1□□□□□ -0.95
SNU71YGR013W YBL113CQ7M4S9 792 aa9.09□□□□□ -0.95
SNU71YGR013W SPC42P36094 363 aa9.08□□□□□ -0.96
SNU71YGR013W SEC20P28791 383 aa9.07□□□□□ -0.96
SNU71YGR013W ARG8P18544 423 aa9.06□□□□□ -0.96
SNU71YGR013W RRP15Q06511 250 aaPredicted RBP9.06□□□□□ -0.96
SNU71YGR013W SPT5P27692 1063 aaKnown RBP9.06□□□□□ -0.96
SNU71YGR013W ERP5P38819 212 aa9.06□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms