RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W TY1B-ORQ92393 1755 aa15.57■□□□□ 0.08
RTF1YGL244W SNT2P53127 1403 aa15.57■□□□□ 0.08
RTF1YGL244W SEC3P33332 1336 aaKnown RBP15.54■□□□□ 0.08
RTF1YGL244W YBT1P32386 1661 aa15.48■□□□□ 0.07
RTF1YGL244W SPT7P35177 1332 aa15.47■□□□□ 0.07
RTF1YGL244W CDC25P04821 1589 aa15.45■□□□□ 0.06
RTF1YGL244W ESC1Q03661 1658 aaKnown RBP15.45■□□□□ 0.06
RTF1YGL244W DNF1P32660 1571 aa15.44■□□□□ 0.06
RTF1YGL244W CAT8P39113 1433 aa15.43■□□□□ 0.06
RTF1YGL244W PDR10P51533 1564 aa15.42■□□□□ 0.06
RTF1YGL244W TY1B-JR2P47100 1755 aaKnown RBP15.41■□□□□ 0.06
RTF1YGL244W TY1B-ER2Q03619 1755 aa15.41■□□□□ 0.06
RTF1YGL244W TY1B-MR1Q04214 1755 aa15.41■□□□□ 0.06
RTF1YGL244W TY1B-MR2Q04670 1755 aaKnown RBP15.41■□□□□ 0.06
RTF1YGL244W TY1B-LR1Q12088 1755 aaKnown RBP15.41■□□□□ 0.06
RTF1YGL244W TY1B-NL1Q12112 1755 aa15.41■□□□□ 0.06
RTF1YGL244W TY1B-GR1Q12141 1755 aa15.41■□□□□ 0.06
RTF1YGL244W TY1B-BLQ12490 1755 aa15.41■□□□□ 0.06
RTF1YGL244W GEA2P39993 1459 aaKnown RBP15.39■□□□□ 0.05
RTF1YGL244W IRC20Q06554 1556 aa15.37■□□□□ 0.05
RTF1YGL244W SRB8P25648 1427 aa15.34■□□□□ 0.05
RTF1YGL244W NUP159P40477 1460 aa15.34■□□□□ 0.05
RTF1YGL244W GCN2P15442 1659 aa15.27■□□□□ 0.04
RTF1YGL244W GDB1Q06625 1536 aa15.25■□□□□ 0.03
RTF1YGL244W NTE1Q04958 1679 aa15.24■□□□□ 0.03
RTF1YGL244W NOP7P53261 605 aaKnown RBP15.22■□□□□ 0.03
RTF1YGL244W ARO1P08566 1588 aaKnown RBP15.21■□□□□ 0.03
RTF1YGL244W RPO21P04050 1733 aaKnown RBP15.21■□□□□ 0.03
RTF1YGL244W PRS1P32895 427 aaKnown RBP15.2■□□□□ 0.02
RTF1YGL244W CKB1P43639 278 aa15.19■□□□□ 0.02
RTF1YGL244W RPA190P10964 1664 aaKnown RBP15.15■□□□□ 0.02
RTF1YGL244W MHP1P43638 1398 aa15.13■□□□□ 0.01
RTF1YGL244W BUD21Q08492 214 aaPredicted RBP15.12■□□□□ 0.01
RTF1YGL244W LEU3P08638 886 aa15.12■□□□□ 0.01
RTF1YGL244W PDR5P33302 1511 aaKnown RBP15.11■□□□□ 0.01
RTF1YGL244W PSD2P53037 1138 aaKnown RBP15.08■□□□□ 0
RTF1YGL244W MMS1Q06211 1407 aa15.07■□□□□ 0
RTF1YGL244W YLR419WQ06698 1435 aaKnown RBP15.05■□□□□ 0
RTF1YGL244W PDR12Q02785 1511 aa15.04■□□□□ -0
RTF1YGL244W PAF1P38351 445 aa15.03■□□□□ -0
RTF1YGL244W MET10P39692 1035 aa15.03■□□□□ -0
RTF1YGL244W NUP157P40064 1391 aaKnown RBP15.02■□□□□ -0
RTF1YGL244W IQG1Q12280 1495 aa15□□□□□ -0.01
RTF1YGL244W ORC1P54784 914 aaPredicted RBP15□□□□□ -0.01
RTF1YGL244W BUD3P25558 1636 aa14.98□□□□□ -0.01
RTF1YGL244W YSP2Q06681 1438 aa14.98□□□□□ -0.01
RTF1YGL244W BFR2Q06631 534 aaKnown RBP14.97□□□□□ -0.01
RTF1YGL244W SPO14P36126 1683 aa14.97□□□□□ -0.01
RTF1YGL244W TFA1P36100 482 aa14.92□□□□□ -0.02
RTF1YGL244W TY3B-IQ7LHG5 1498 aaKnown RBP14.9□□□□□ -0.02
RTF1YGL244W YOR093CQ12275 1648 aa14.89□□□□□ -0.03
RTF1YGL244W LTE1P07866 1435 aa14.87□□□□□ -0.03
RTF1YGL244W PDS5Q04264 1277 aa14.86□□□□□ -0.03
RTF1YGL244W YRF1-1P0CX20 1796 aa14.81□□□□□ -0.04
RTF1YGL244W YRF1-5P0CX21 1796 aa14.81□□□□□ -0.04
RTF1YGL244W YRF1-8P0CX22 1796 aa14.81□□□□□ -0.04
RTF1YGL244W RAV1P47104 1357 aa14.79□□□□□ -0.04
RTF1YGL244W RTC1Q08281 1341 aa14.77□□□□□ -0.04
RTF1YGL244W BNR1P40450 1375 aa14.77□□□□□ -0.05
RTF1YGL244W CFT1Q06632 1357 aaKnown RBP14.77□□□□□ -0.05
RTF1YGL244W CHC1P22137 1653 aaKnown RBP14.76□□□□□ -0.05
RTF1YGL244W TAF5P38129 798 aa14.75□□□□□ -0.05
RTF1YGL244W NST1P53935 1240 aa14.71□□□□□ -0.05
RTF1YGL244W KIP3P53086 805 aaKnown RBP14.71□□□□□ -0.06
RTF1YGL244W SEC7P11075 2009 aaKnown RBP14.7□□□□□ -0.06
RTF1YGL244W MTC1P47018 478 aaKnown RBP14.7□□□□□ -0.06
RTF1YGL244W PDR11P40550 1411 aa14.68□□□□□ -0.06
RTF1YGL244W ESL2P36168 1195 aa14.68□□□□□ -0.06
RTF1YGL244W DRS2P39524 1355 aa14.67□□□□□ -0.06
RTF1YGL244W SCT1P32784 759 aa14.65□□□□□ -0.06
RTF1YGL244W MET5P47169 1442 aa14.64□□□□□ -0.07
RTF1YGL244W RPP0P05317 312 aaKnown RBP14.61□□□□□ -0.07
RTF1YGL244W FUN12P39730 1002 aaKnown RBP14.61□□□□□ -0.07
RTF1YGL244W CDC45Q08032 650 aa14.61□□□□□ -0.07
RTF1YGL244W VPS27P40343 622 aaKnown RBP14.59□□□□□ -0.07
RTF1YGL244W VMR1P38735 1592 aa14.59□□□□□ -0.07
RTF1YGL244W RPC31P17890 251 aa14.58□□□□□ -0.08
RTF1YGL244W DOP1Q03921 1698 aa14.55□□□□□ -0.08
RTF1YGL244W IML1P47170 1584 aa14.54□□□□□ -0.08
RTF1YGL244W SPE2P21182 396 aa14.52□□□□□ -0.08
RTF1YGL244W RVB2Q12464 471 aaKnown RBP14.52□□□□□ -0.08
RTF1YGL244W NUP192P47054 1683 aa14.52□□□□□ -0.08
RTF1YGL244W FPR3P38911 411 aaKnown RBP14.52□□□□□ -0.09
RTF1YGL244W NUP188P52593 1655 aaKnown RBP14.51□□□□□ -0.09
RTF1YGL244W IME2P32581 645 aa14.5□□□□□ -0.09
RTF1YGL244W RTG3P38165 486 aa14.46□□□□□ -0.09
RTF1YGL244W IOC4Q04213 475 aa14.46□□□□□ -0.1
RTF1YGL244W YDL144CQ07589 356 aa14.46□□□□□ -0.1
RTF1YGL244W YPR148CQ06523 435 aa14.45□□□□□ -0.1
RTF1YGL244W OPY1P38271 328 aa14.44□□□□□ -0.1
RTF1YGL244W YRB30P53107 440 aaPredicted RBP14.44□□□□□ -0.1
RTF1YGL244W MLP1Q02455 1875 aaKnown RBP14.43□□□□□ -0.1
RTF1YGL244W YFR016CP43597 1233 aaKnown RBP14.42□□□□□ -0.1
RTF1YGL244W DNF2Q12675 1612 aa14.41□□□□□ -0.1
RTF1YGL244W TRM3Q07527 1436 aa14.39□□□□□ -0.11
RTF1YGL244W CLC1P17891 233 aa14.39□□□□□ -0.11
RTF1YGL244W FKH1P40466 484 aa14.39□□□□□ -0.11
RTF1YGL244W YAP3P38749 330 aa14.38□□□□□ -0.11
RTF1YGL244W SUI2P20459 304 aaKnown RBP14.36□□□□□ -0.11
RTF1YGL244W CHZ1P40019 153 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms