RNA–Protein interactions for RNA: YGL103W

RPL28, Transcript of Ribosomal 60S subunit protein L28, yeastyeast

Gene RPL28, Length 450 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL28YGL103W ESC1Q03661 1658 aaKnown RBP6.52□□□□□ -1.37
RPL28YGL103W RPG1P38249 964 aaKnown RBP6.51□□□□□ -1.37
RPL28YGL103W GEA2P39993 1459 aaKnown RBP6.51□□□□□ -1.37
RPL28YGL103W NUP159P40477 1460 aa6.51□□□□□ -1.37
RPL28YGL103W SRB8P25648 1427 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-HO13535 1793 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-DR5P0C2I2 1755 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-DR6P0C2I3 1755 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-LR2P0C2I5 1755 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-LR3P0C2I6 1755 aaKnown RBP6.5□□□□□ -1.37
RPL28YGL103W TY1B-PR1P0C2I9 1755 aaKnown RBP6.5□□□□□ -1.37
RPL28YGL103W TY1B-PR2P0C2J0 1756 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-PR3P0C2J1 1755 aaKnown RBP6.5□□□□□ -1.37
RPL28YGL103W TY1B-JR1P47098 1755 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-ML2Q03434 1755 aaKnown RBP6.5□□□□□ -1.37
RPL28YGL103W TY1B-ER1Q03612 1755 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-ML1Q04711 1755 aaKnown RBP6.5□□□□□ -1.37
RPL28YGL103W TY1B-GR2Q12269 1755 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-OLQ12273 1755 aa6.5□□□□□ -1.37
RPL28YGL103W TY1B-PLQ12414 1755 aaKnown RBP6.5□□□□□ -1.37
RPL28YGL103W CDC25P04821 1589 aa6.5□□□□□ -1.37
RPL28YGL103W PRS1P32895 427 aaKnown RBP6.5□□□□□ -1.37
RPL28YGL103W ORC1P54784 914 aaPredicted RBP6.5□□□□□ -1.37
RPL28YGL103W YBT1P32386 1661 aa6.49□□□□□ -1.37
RPL28YGL103W BUD21Q08492 214 aaPredicted RBP6.48□□□□□ -1.37
RPL28YGL103W MHP1P43638 1398 aa6.47□□□□□ -1.37
RPL28YGL103W TY1B-BRQ12193 1756 aa6.47□□□□□ -1.37
RPL28YGL103W TY1B-GR3Q12316 1755 aa6.47□□□□□ -1.37
RPL28YGL103W TY1B-ORQ92393 1755 aa6.47□□□□□ -1.37
RPL28YGL103W PSD2P53037 1138 aaKnown RBP6.47□□□□□ -1.37
RPL28YGL103W PAF1P38351 445 aa6.46□□□□□ -1.38
RPL28YGL103W GDB1Q06625 1536 aa6.45□□□□□ -1.38
RPL28YGL103W IRC20Q06554 1556 aa6.45□□□□□ -1.38
RPL28YGL103W GCN2P15442 1659 aa6.43□□□□□ -1.38
RPL28YGL103W TSR3Q12094 313 aaKnown RBP6.43□□□□□ -1.38
RPL28YGL103W ARO1P08566 1588 aaKnown RBP6.43□□□□□ -1.38
RPL28YGL103W NTE1Q04958 1679 aa6.41□□□□□ -1.38
RPL28YGL103W TY1B-JR2P47100 1755 aaKnown RBP6.41□□□□□ -1.38
RPL28YGL103W TY1B-ER2Q03619 1755 aa6.41□□□□□ -1.38
RPL28YGL103W TY1B-MR1Q04214 1755 aa6.41□□□□□ -1.38
RPL28YGL103W TY1B-MR2Q04670 1755 aaKnown RBP6.41□□□□□ -1.38
RPL28YGL103W TY1B-LR1Q12088 1755 aaKnown RBP6.41□□□□□ -1.38
RPL28YGL103W TY1B-NL1Q12112 1755 aa6.41□□□□□ -1.38
RPL28YGL103W TY1B-GR1Q12141 1755 aa6.41□□□□□ -1.38
RPL28YGL103W TY1B-BLQ12490 1755 aa6.41□□□□□ -1.38
RPL28YGL103W BFR2Q06631 534 aaKnown RBP6.4□□□□□ -1.38
RPL28YGL103W NUP157P40064 1391 aaKnown RBP6.39□□□□□ -1.39
RPL28YGL103W MMS1Q06211 1407 aa6.39□□□□□ -1.39
RPL28YGL103W YLR419WQ06698 1435 aaKnown RBP6.39□□□□□ -1.39
RPL28YGL103W TFA1P36100 482 aa6.38□□□□□ -1.39
RPL28YGL103W IQG1Q12280 1495 aa6.38□□□□□ -1.39
RPL28YGL103W RPO21P04050 1733 aaKnown RBP6.37□□□□□ -1.39
RPL28YGL103W MET10P39692 1035 aa6.37□□□□□ -1.39
RPL28YGL103W PDS5Q04264 1277 aa6.37□□□□□ -1.39
RPL28YGL103W BUD3P25558 1636 aa6.35□□□□□ -1.39
RPL28YGL103W PDR5P33302 1511 aaKnown RBP6.35□□□□□ -1.39
RPL28YGL103W CFT1Q06632 1357 aaKnown RBP6.34□□□□□ -1.39
RPL28YGL103W TAF5P38129 798 aa6.34□□□□□ -1.39
RPL28YGL103W FUN12P39730 1002 aaKnown RBP6.34□□□□□ -1.39
RPL28YGL103W RPA190P10964 1664 aaKnown RBP6.33□□□□□ -1.4
RPL28YGL103W YSP2Q06681 1438 aa6.32□□□□□ -1.4
RPL28YGL103W PDR12Q02785 1511 aa6.31□□□□□ -1.4
RPL28YGL103W KIP3P53086 805 aaKnown RBP6.31□□□□□ -1.4
RPL28YGL103W LTE1P07866 1435 aa6.31□□□□□ -1.4
RPL28YGL103W RPC31P17890 251 aa6.3□□□□□ -1.4
RPL28YGL103W FPR3P38911 411 aaKnown RBP6.3□□□□□ -1.4
RPL28YGL103W TY3B-IQ7LHG5 1498 aaKnown RBP6.29□□□□□ -1.4
RPL28YGL103W SCT1P32784 759 aa6.29□□□□□ -1.4
RPL28YGL103W NST1P53935 1240 aa6.29□□□□□ -1.4
RPL28YGL103W SPO14P36126 1683 aa6.29□□□□□ -1.4
RPL28YGL103W BNR1P40450 1375 aa6.29□□□□□ -1.4
RPL28YGL103W YOR093CQ12275 1648 aa6.28□□□□□ -1.4
RPL28YGL103W ESL2P36168 1195 aa6.27□□□□□ -1.41
RPL28YGL103W YFR016CP43597 1233 aaKnown RBP6.27□□□□□ -1.41
RPL28YGL103W CDC45Q08032 650 aa6.27□□□□□ -1.41
RPL28YGL103W RAV1P47104 1357 aa6.27□□□□□ -1.41
RPL28YGL103W RTC1Q08281 1341 aa6.26□□□□□ -1.41
RPL28YGL103W CAB3P36076 571 aa6.26□□□□□ -1.41
RPL28YGL103W EAF7P53911 425 aaKnown RBP6.26□□□□□ -1.41
RPL28YGL103W YPR148CQ06523 435 aa6.26□□□□□ -1.41
RPL28YGL103W MRPL32P25348 183 aa6.25□□□□□ -1.41
RPL28YGL103W VPS27P40343 622 aaKnown RBP6.25□□□□□ -1.41
RPL28YGL103W DRS2P39524 1355 aa6.24□□□□□ -1.41
RPL28YGL103W RPP0P05317 312 aaKnown RBP6.23□□□□□ -1.41
RPL28YGL103W RVB2Q12464 471 aaKnown RBP6.23□□□□□ -1.41
RPL28YGL103W CLC1P17891 233 aa6.22□□□□□ -1.41
RPL28YGL103W SPE2P21182 396 aa6.21□□□□□ -1.42
RPL28YGL103W IME2P32581 645 aa6.21□□□□□ -1.42
RPL28YGL103W YDL144CQ07589 356 aa6.21□□□□□ -1.42
RPL28YGL103W CHC1P22137 1653 aaKnown RBP6.2□□□□□ -1.42
RPL28YGL103W PDR11P40550 1411 aa6.2□□□□□ -1.42
RPL28YGL103W RTG3P38165 486 aa6.2□□□□□ -1.42
RPL28YGL103W EBP2P36049 427 aaKnown RBP6.19□□□□□ -1.42
RPL28YGL103W OPY1P38271 328 aa6.17□□□□□ -1.42
RPL28YGL103W VMR1P38735 1592 aa6.17□□□□□ -1.42
RPL28YGL103W IML1P47170 1584 aa6.17□□□□□ -1.42
RPL28YGL103W YRF1-1P0CX20 1796 aa6.16□□□□□ -1.42
RPL28YGL103W YRF1-5P0CX21 1796 aa6.16□□□□□ -1.42
RPL28YGL103W YRF1-8P0CX22 1796 aa6.16□□□□□ -1.42
RPL28YGL103W YRB30P53107 440 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 9.1 ms