RNA–Protein interactions for RNA: YFL055W

AGP3, Transcript of Low-affinity amino acid permease, yeastyeast

Gene AGP3, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AGP3YFL055W VTH1P40438 1549 aa11.54□□□□□ -0.56
AGP3YFL055W VTH2P40890 1549 aa11.54□□□□□ -0.56
AGP3YFL055W ULS1Q08562 1619 aa11.52□□□□□ -0.57
AGP3YFL055W MET5P47169 1442 aa11.5□□□□□ -0.57
AGP3YFL055W TY1B-JR2P47100 1755 aaKnown RBP11.49□□□□□ -0.57
AGP3YFL055W TY1B-ER2Q03619 1755 aa11.49□□□□□ -0.57
AGP3YFL055W TY1B-MR1Q04214 1755 aa11.49□□□□□ -0.57
AGP3YFL055W TY1B-MR2Q04670 1755 aaKnown RBP11.49□□□□□ -0.57
AGP3YFL055W TY1B-LR1Q12088 1755 aaKnown RBP11.49□□□□□ -0.57
AGP3YFL055W TY1B-NL1Q12112 1755 aa11.49□□□□□ -0.57
AGP3YFL055W TY1B-GR1Q12141 1755 aa11.49□□□□□ -0.57
AGP3YFL055W TY1B-BLQ12490 1755 aa11.49□□□□□ -0.57
AGP3YFL055W RTT106P40161 455 aa11.46□□□□□ -0.58
AGP3YFL055W NTE1Q04958 1679 aa11.43□□□□□ -0.58
AGP3YFL055W TY3B-GQ99315 1547 aa11.42□□□□□ -0.58
AGP3YFL055W NUP159P40477 1460 aa11.42□□□□□ -0.58
AGP3YFL055W SEC3P33332 1336 aaKnown RBP11.41□□□□□ -0.58
AGP3YFL055W SPT7P35177 1332 aa11.41□□□□□ -0.58
AGP3YFL055W PDR10P51533 1564 aa11.4□□□□□ -0.58
AGP3YFL055W RPO21P04050 1733 aaKnown RBP11.38□□□□□ -0.59
AGP3YFL055W SNT2P53127 1403 aa11.38□□□□□ -0.59
AGP3YFL055W VPS15P22219 1454 aa11.34□□□□□ -0.59
AGP3YFL055W YRF1-1P0CX20 1796 aa11.33□□□□□ -0.59
AGP3YFL055W YRF1-5P0CX21 1796 aa11.33□□□□□ -0.59
AGP3YFL055W YRF1-8P0CX22 1796 aa11.33□□□□□ -0.59
AGP3YFL055W YBT1P32386 1661 aa11.33□□□□□ -0.6
AGP3YFL055W LTE1P07866 1435 aa11.29□□□□□ -0.6
AGP3YFL055W GEA2P39993 1459 aaKnown RBP11.26□□□□□ -0.61
AGP3YFL055W MET10P39692 1035 aa11.23□□□□□ -0.61
AGP3YFL055W PRS1P32895 427 aaKnown RBP11.22□□□□□ -0.61
AGP3YFL055W IRC20Q06554 1556 aa11.18□□□□□ -0.62
AGP3YFL055W GCN2P15442 1659 aa11.18□□□□□ -0.62
AGP3YFL055W SPO14P36126 1683 aa11.18□□□□□ -0.62
AGP3YFL055W BFR2Q06631 534 aaKnown RBP11.18□□□□□ -0.62
AGP3YFL055W CAT8P39113 1433 aa11.18□□□□□ -0.62
AGP3YFL055W PDR12Q02785 1511 aa11.17□□□□□ -0.62
AGP3YFL055W LEU3P08638 886 aa11.16□□□□□ -0.62
AGP3YFL055W SRB8P25648 1427 aa11.14□□□□□ -0.63
AGP3YFL055W GDB1Q06625 1536 aa11.13□□□□□ -0.63
AGP3YFL055W NUP157P40064 1391 aaKnown RBP11.12□□□□□ -0.63
AGP3YFL055W ITT1Q04638 464 aa11.12□□□□□ -0.63
AGP3YFL055W BNI1P41832 1953 aa11.11□□□□□ -0.63
AGP3YFL055W DRS2P39524 1355 aa11.11□□□□□ -0.63
AGP3YFL055W YLR419WQ06698 1435 aaKnown RBP11.09□□□□□ -0.63
AGP3YFL055W PSD2P53037 1138 aaKnown RBP11.08□□□□□ -0.64
AGP3YFL055W NOP7P53261 605 aaKnown RBP11.08□□□□□ -0.64
AGP3YFL055W MHP1P43638 1398 aa11.08□□□□□ -0.64
AGP3YFL055W ARO1P08566 1588 aaKnown RBP11.08□□□□□ -0.64
AGP3YFL055W PDR5P33302 1511 aaKnown RBP11.04□□□□□ -0.64
AGP3YFL055W IQG1Q12280 1495 aa11.04□□□□□ -0.64
AGP3YFL055W TFA1P36100 482 aa11.01□□□□□ -0.65
AGP3YFL055W CKB1P43639 278 aa11.01□□□□□ -0.65
AGP3YFL055W ORC1P54784 914 aaPredicted RBP10.99□□□□□ -0.65
AGP3YFL055W MMS1Q06211 1407 aa10.99□□□□□ -0.65
AGP3YFL055W BUD3P25558 1636 aa10.96□□□□□ -0.66
AGP3YFL055W BUD21Q08492 214 aaPredicted RBP10.95□□□□□ -0.66
AGP3YFL055W CFT1Q06632 1357 aaKnown RBP10.95□□□□□ -0.66
AGP3YFL055W TRM3Q07527 1436 aa10.92□□□□□ -0.66
AGP3YFL055W DOP1Q03921 1698 aa10.92□□□□□ -0.66
AGP3YFL055W YSP2Q06681 1438 aa10.91□□□□□ -0.66
AGP3YFL055W PAF1P38351 445 aa10.91□□□□□ -0.66
AGP3YFL055W TY3B-IQ7LHG5 1498 aaKnown RBP10.89□□□□□ -0.67
AGP3YFL055W YOR093CQ12275 1648 aa10.89□□□□□ -0.67
AGP3YFL055W PDS5Q04264 1277 aa10.87□□□□□ -0.67
AGP3YFL055W YPR148CQ06523 435 aa10.85□□□□□ -0.67
AGP3YFL055W BNR1P40450 1375 aa10.84□□□□□ -0.67
AGP3YFL055W DNF2Q12675 1612 aa10.83□□□□□ -0.68
AGP3YFL055W CHC1P22137 1653 aaKnown RBP10.82□□□□□ -0.68
AGP3YFL055W CAB3P36076 571 aa10.82□□□□□ -0.68
AGP3YFL055W FUN12P39730 1002 aaKnown RBP10.82□□□□□ -0.68
AGP3YFL055W NST1P53935 1240 aa10.81□□□□□ -0.68
AGP3YFL055W SEC7P11075 2009 aaKnown RBP10.81□□□□□ -0.68
AGP3YFL055W ABP1P15891 592 aaKnown RBP10.79□□□□□ -0.68
AGP3YFL055W RPC31P17890 251 aa10.79□□□□□ -0.68
AGP3YFL055W IME2P32581 645 aa10.77□□□□□ -0.69
AGP3YFL055W EBP2P36049 427 aaKnown RBP10.75□□□□□ -0.69
AGP3YFL055W TAF5P38129 798 aa10.75□□□□□ -0.69
AGP3YFL055W RAV1P47104 1357 aa10.74□□□□□ -0.69
AGP3YFL055W YFR016CP43597 1233 aaKnown RBP10.73□□□□□ -0.69
AGP3YFL055W RTC1Q08281 1341 aa10.72□□□□□ -0.69
AGP3YFL055W KIP3P53086 805 aaKnown RBP10.72□□□□□ -0.69
AGP3YFL055W CDC45Q08032 650 aa10.71□□□□□ -0.69
AGP3YFL055W CLC1P17891 233 aa10.7□□□□□ -0.7
AGP3YFL055W OPY1P38271 328 aa10.7□□□□□ -0.7
AGP3YFL055W RPP0P05317 312 aaKnown RBP10.69□□□□□ -0.7
AGP3YFL055W VPS27P40343 622 aaKnown RBP10.69□□□□□ -0.7
AGP3YFL055W FPR3P38911 411 aaKnown RBP10.68□□□□□ -0.7
AGP3YFL055W RVB2Q12464 471 aaKnown RBP10.68□□□□□ -0.7
AGP3YFL055W PDR11P40550 1411 aa10.68□□□□□ -0.7
AGP3YFL055W ESL2P36168 1195 aa10.66□□□□□ -0.7
AGP3YFL055W EAF7P53911 425 aaKnown RBP10.66□□□□□ -0.7
AGP3YFL055W VMR1P38735 1592 aa10.64□□□□□ -0.71
AGP3YFL055W MLP1Q02455 1875 aaKnown RBP10.63□□□□□ -0.71
AGP3YFL055W NUP192P47054 1683 aa10.63□□□□□ -0.71
AGP3YFL055W MIF2P35201 549 aa10.63□□□□□ -0.71
AGP3YFL055W YAP3P38749 330 aa10.61□□□□□ -0.71
AGP3YFL055W SCT1P32784 759 aa10.6□□□□□ -0.71
AGP3YFL055W YDL144CQ07589 356 aa10.6□□□□□ -0.71
AGP3YFL055W NUP188P52593 1655 aaKnown RBP10.58□□□□□ -0.72
AGP3YFL055W IML1P47170 1584 aa10.57□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms