RNA–Protein interactions for RNA: YER117W

RPL23B, Transcript of Ribosomal 60S subunit protein L23B, yeastyeast

Gene RPL23B, Length 414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL23BYER117W SMC4Q12267 1418 aa4.71□□□□□ -1.66
RPL23BYER117W SPP41P38904 1435 aa4.7□□□□□ -1.66
RPL23BYER117W YKR023WP36119 530 aaKnown RBP4.69□□□□□ -1.66
RPL23BYER117W TY1B-JR2P47100 1755 aaKnown RBP4.68□□□□□ -1.66
RPL23BYER117W TY1B-ER2Q03619 1755 aa4.68□□□□□ -1.66
RPL23BYER117W TY1B-MR1Q04214 1755 aa4.68□□□□□ -1.66
RPL23BYER117W TY1B-MR2Q04670 1755 aaKnown RBP4.68□□□□□ -1.66
RPL23BYER117W TY1B-LR1Q12088 1755 aaKnown RBP4.68□□□□□ -1.66
RPL23BYER117W TY1B-NL1Q12112 1755 aa4.68□□□□□ -1.66
RPL23BYER117W TY1B-GR1Q12141 1755 aa4.68□□□□□ -1.66
RPL23BYER117W TY1B-BLQ12490 1755 aa4.68□□□□□ -1.66
RPL23BYER117W NTE1Q04958 1679 aa4.68□□□□□ -1.66
RPL23BYER117W LTE1P07866 1435 aa4.68□□□□□ -1.66
RPL23BYER117W VTH1P40438 1549 aa4.67□□□□□ -1.66
RPL23BYER117W VTH2P40890 1549 aa4.67□□□□□ -1.66
RPL23BYER117W GEA2P39993 1459 aaKnown RBP4.66□□□□□ -1.66
RPL23BYER117W NUP159P40477 1460 aa4.66□□□□□ -1.66
RPL23BYER117W YRF1-1P0CX20 1796 aa4.65□□□□□ -1.66
RPL23BYER117W YRF1-5P0CX21 1796 aa4.65□□□□□ -1.66
RPL23BYER117W YRF1-8P0CX22 1796 aa4.65□□□□□ -1.66
RPL23BYER117W TSC11P40061 1430 aa4.65□□□□□ -1.66
RPL23BYER117W RPO21P04050 1733 aaKnown RBP4.65□□□□□ -1.67
RPL23BYER117W YTA7P40340 1379 aa4.64□□□□□ -1.67
RPL23BYER117W VPS15P22219 1454 aa4.63□□□□□ -1.67
RPL23BYER117W MYO4P32492 1471 aa4.62□□□□□ -1.67
RPL23BYER117W BNI1P41832 1953 aa4.62□□□□□ -1.67
RPL23BYER117W TFC8Q12308 588 aa4.62□□□□□ -1.67
RPL23BYER117W YGL015CP33199 130 aa4.61□□□□□ -1.67
RPL23BYER117W CDC27P38042 758 aa4.61□□□□□ -1.67
RPL23BYER117W YIL055CP40523 627 aaKnown RBP4.6□□□□□ -1.67
RPL23BYER117W ITT1Q04638 464 aa4.6□□□□□ -1.67
RPL23BYER117W SNQ2P32568 1501 aaKnown RBP4.6□□□□□ -1.67
RPL23BYER117W HOP09932 586 aa4.59□□□□□ -1.67
RPL23BYER117W DRS2P39524 1355 aa4.59□□□□□ -1.67
RPL23BYER117W MLP2P40457 1679 aa4.59□□□□□ -1.67
RPL23BYER117W STH1P32597 1359 aa4.58□□□□□ -1.68
RPL23BYER117W MMS1Q06211 1407 aa4.57□□□□□ -1.68
RPL23BYER117W RTT106P40161 455 aa4.57□□□□□ -1.68
RPL23BYER117W SAS10Q12136 610 aaPredicted RBP4.57□□□□□ -1.68
RPL23BYER117W ULS1Q08562 1619 aa4.57□□□□□ -1.68
RPL23BYER117W ABP1P15891 592 aaKnown RBP4.56□□□□□ -1.68
RPL23BYER117W MIF2P35201 549 aa4.56□□□□□ -1.68
RPL23BYER117W NUP170P38181 1502 aa4.56□□□□□ -1.68
RPL23BYER117W SPO14P36126 1683 aa4.55□□□□□ -1.68
RPL23BYER117W OXP1P28273 1286 aa4.55□□□□□ -1.68
RPL23BYER117W PTP3P40048 928 aa4.55□□□□□ -1.68
RPL23BYER117W SNT2P53127 1403 aa4.55□□□□□ -1.68
RPL23BYER117W MET10P39692 1035 aa4.54□□□□□ -1.68
RPL23BYER117W UBP10P53874 792 aaPredicted RBP4.54□□□□□ -1.68
RPL23BYER117W PDR15Q04182 1529 aaKnown RBP4.54□□□□□ -1.68
RPL23BYER117W DCD1P06773 312 aa4.53□□□□□ -1.68
RPL23BYER117W IFH1P39520 1085 aa4.52□□□□□ -1.69
RPL23BYER117W DOP1Q03921 1698 aa4.51□□□□□ -1.69
RPL23BYER117W DNF2Q12675 1612 aa4.51□□□□□ -1.69
RPL23BYER117W NUP157P40064 1391 aaKnown RBP4.51□□□□□ -1.69
RPL23BYER117W PDR12Q02785 1511 aa4.51□□□□□ -1.69
RPL23BYER117W GDB1Q06625 1536 aa4.51□□□□□ -1.69
RPL23BYER117W SSP1P38871 571 aa4.5□□□□□ -1.69
RPL23BYER117W YAH1Q12184 172 aaKnown RBP4.5□□□□□ -1.69
RPL23BYER117W ARP8Q12386 881 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
RPL23BYER117W IRC20Q06554 1556 aa4.49□□□□□ -1.69
RPL23BYER117W TAF7Q05021 590 aa4.49□□□□□ -1.69
RPL23BYER117W IQG1Q12280 1495 aa4.49□□□□□ -1.69
RPL23BYER117W PDR10P51533 1564 aa4.48□□□□□ -1.69
RPL23BYER117W RSM7P47150 247 aa4.48□□□□□ -1.69
RPL23BYER117W BCH2P36122 765 aa4.47□□□□□ -1.69
RPL23BYER117W MAP2P38174 421 aaKnown RBP4.46□□□□□ -1.7
RPL23BYER117W BUD3P25558 1636 aa4.46□□□□□ -1.7
RPL23BYER117W TRM3Q07527 1436 aa4.46□□□□□ -1.7
RPL23BYER117W BBC1P47068 1157 aa4.45□□□□□ -1.7
RPL23BYER117W GEA1P47102 1408 aaPredicted RBP4.45□□□□□ -1.7
RPL23BYER117W YBT1P32386 1661 aa4.45□□□□□ -1.7
RPL23BYER117W SCY1P53009 804 aa4.44□□□□□ -1.7
RPL23BYER117W CHC1P22137 1653 aaKnown RBP4.44□□□□□ -1.7
RPL23BYER117W TY3B-GQ99315 1547 aa4.42□□□□□ -1.7
RPL23BYER117W CAT8P39113 1433 aa4.42□□□□□ -1.7
RPL23BYER117W YFR006WP43590 535 aa4.42□□□□□ -1.7
RPL23BYER117W CKB1P43639 278 aa4.42□□□□□ -1.7
RPL23BYER117W YLR271WQ06152 274 aa4.42□□□□□ -1.7
RPL23BYER117W AI2P03876 854 aa4.41□□□□□ -1.7
RPL23BYER117W SLX5P32828 619 aaKnown RBP4.41□□□□□ -1.7
RPL23BYER117W ARO1P08566 1588 aaKnown RBP4.4□□□□□ -1.7
RPL23BYER117W EPS1P40557 701 aa4.4□□□□□ -1.71
RPL23BYER117W SEC7P11075 2009 aaKnown RBP4.39□□□□□ -1.71
RPL23BYER117W YOR093CQ12275 1648 aa4.39□□□□□ -1.71
RPL23BYER117W TIF4632P39936 914 aaKnown RBP4.39□□□□□ -1.71
RPL23BYER117W MGA2P40578 1113 aa4.37□□□□□ -1.71
RPL23BYER117W BNR1P40450 1375 aa4.37□□□□□ -1.71
RPL23BYER117W DNF3Q12674 1656 aa4.36□□□□□ -1.71
RPL23BYER117W BDF1P35817 686 aa4.36□□□□□ -1.71
RPL23BYER117W YSP2Q06681 1438 aa4.36□□□□□ -1.71
RPL23BYER117W SRB8P25648 1427 aa4.33□□□□□ -1.72
RPL23BYER117W YAP3P38749 330 aa4.33□□□□□ -1.72
RPL23BYER117W PSD2P53037 1138 aaKnown RBP4.33□□□□□ -1.72
RPL23BYER117W TGL3P40308 642 aa4.32□□□□□ -1.72
RPL23BYER117W BUD21Q08492 214 aaPredicted RBP4.31□□□□□ -1.72
RPL23BYER117W URN1Q06525 465 aaKnown RBP4.3□□□□□ -1.72
RPL23BYER117W USO1P25386 1790 aa4.3□□□□□ -1.72
RPL23BYER117W MAK10Q02197 733 aa4.28□□□□□ -1.72
RPL23BYER117W NUP188P52593 1655 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 46.5 ms