RNA–Protein interactions for RNA: YER072W

VTC1, Transcript of Subunit of the vacuolar transporter chaperone (VTC) complex, yeastyeast

Gene VTC1, Length 390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTC1YER072W YEL023CP39992 682 aa5.9□□□□□ -1.46
VTC1YER072W RGA2Q06407 1009 aa5.9□□□□□ -1.46
VTC1YER072W CST9Q06032 482 aa5.88□□□□□ -1.47
VTC1YER072W ARP8Q12386 881 aaKnown RBP RIP-Chip data5.88□□□□□ -1.47not detected
VTC1YER072W DPS1P04802 557 aaKnown RBP5.87□□□□□ -1.47
VTC1YER072W YDR344CQ05510 147 aa5.87□□□□□ -1.47
VTC1YER072W RCR1P38212 213 aa5.83□□□□□ -1.48
VTC1YER072W SSP1P38871 571 aa5.83□□□□□ -1.48
VTC1YER072W ELP4Q02884 456 aaKnown RBP5.83□□□□□ -1.48
VTC1YER072W PML39Q03760 334 aa5.8□□□□□ -1.48
VTC1YER072W MGA2P40578 1113 aa5.78□□□□□ -1.48
VTC1YER072W TFA1P36100 482 aa5.75□□□□□ -1.49
VTC1YER072W RGA1P39083 1007 aa5.75□□□□□ -1.49
VTC1YER072W ARH1P48360 493 aa5.74□□□□□ -1.49
VTC1YER072W SRC1Q03707 834 aa5.74□□□□□ -1.49
VTC1YER072W GRE2Q12068 342 aaKnown RBP5.71□□□□□ -1.5
VTC1YER072W MID1P41821 548 aa5.69□□□□□ -1.5
VTC1YER072W SPT23P35210 1082 aa5.68□□□□□ -1.5
VTC1YER072W ATH1P48016 1211 aa5.63□□□□□ -1.51
VTC1YER072W PEX29Q03370 554 aa5.63□□□□□ -1.51
VTC1YER072W GUT1P32190 709 aa5.62□□□□□ -1.51
VTC1YER072W NST1P53935 1240 aa5.61□□□□□ -1.51
VTC1YER072W MIF2P35201 549 aa5.6□□□□□ -1.51
VTC1YER072W HAP5Q02516 242 aa5.6□□□□□ -1.51
VTC1YER072W PTC3P34221 468 aaKnown RBP5.58□□□□□ -1.52
VTC1YER072W BNI4P53858 892 aa5.58□□□□□ -1.52
VTC1YER072W YML082WQ04533 649 aaKnown RBP5.58□□□□□ -1.52
VTC1YER072W PTC2P39966 464 aaKnown RBP5.57□□□□□ -1.52
VTC1YER072W EDS1P38073 919 aa5.56□□□□□ -1.52
VTC1YER072W SOL3P38858 249 aa5.55□□□□□ -1.52
VTC1YER072W RAS1P01119 309 aa5.54□□□□□ -1.52
VTC1YER072W AI4P03878 556 aa5.54□□□□□ -1.52
VTC1YER072W MPH3P0CE00 602 aa5.54□□□□□ -1.52
VTC1YER072W MAK11P20484 414 aaKnown RBP5.51□□□□□ -1.53
VTC1YER072W ILV3P39522 585 aaKnown RBP5.51□□□□□ -1.53
VTC1YER072W MPC54Q08550 464 aa5.5□□□□□ -1.53
VTC1YER072W NMA111P53920 997 aa5.46□□□□□ -1.54
VTC1YER072W TRK1P12685 1235 aa5.45□□□□□ -1.54
VTC1YER072W COQ8P27697 501 aa5.44□□□□□ -1.54
VTC1YER072W RAM2P29703 316 aa5.44□□□□□ -1.54
VTC1YER072W YPR015CQ12531 247 aa5.43□□□□□ -1.54
VTC1YER072W AMS1P22855 1083 aa5.41□□□□□ -1.54
VTC1YER072W DPL1Q05567 589 aa5.4□□□□□ -1.54
VTC1YER072W SLI15P38283 698 aa5.39□□□□□ -1.55
VTC1YER072W YGR273CP53329 174 aa5.39□□□□□ -1.55
VTC1YER072W RAM1P22007 431 aa5.38□□□□□ -1.55
VTC1YER072W YPL062WQ02781 134 aa5.38□□□□□ -1.55
VTC1YER072W GYP1Q08484 637 aa5.37□□□□□ -1.55
VTC1YER072W SDH2P21801 266 aa5.33□□□□□ -1.56
VTC1YER072W ISU2Q12056 156 aa5.33□□□□□ -1.56
VTC1YER072W SAS4Q04003 481 aa5.29□□□□□ -1.56
VTC1YER072W NOP53Q12080 455 aaKnown RBP5.28□□□□□ -1.56
VTC1YER072W YEL077CQ3E7X8 1277 aa5.27□□□□□ -1.57
VTC1YER072W PDR1P12383 1068 aa5.26□□□□□ -1.57
VTC1YER072W CDC73Q06697 393 aa5.26□□□□□ -1.57
VTC1YER072W KEX1P09620 729 aa5.24□□□□□ -1.57
VTC1YER072W GAR1P28007 205 aaKnown RBP5.22□□□□□ -1.57
VTC1YER072W BRE2P43132 505 aa5.21□□□□□ -1.58
VTC1YER072W GBP2P25555 427 aaKnown RBP RIP-Chip data5.2□□□□□ -1.58not detected
VTC1YER072W MRF1P30775 413 aaPredicted RBP5.2□□□□□ -1.58
VTC1YER072W GCR2Q01722 534 aa5.17□□□□□ -1.58
VTC1YER072W AIR1P40507 360 aaKnown RBP5.16□□□□□ -1.58
VTC1YER072W BUD20Q08004 166 aaPredicted RBP5.14□□□□□ -1.59
VTC1YER072W CLA4P48562 842 aa5.13□□□□□ -1.59
VTC1YER072W YLR326WQ06170 240 aaKnown RBP5.13□□□□□ -1.59
VTC1YER072W PRT1P06103 763 aaKnown RBP5.12□□□□□ -1.59
VTC1YER072W ERG12P07277 443 aa5.12□□□□□ -1.59
VTC1YER072W UBP14P38237 781 aaKnown RBP5.11□□□□□ -1.59
VTC1YER072W PCS60P38137 543 aaKnown RBP RIP-Chip data5.1□□□□□ -1.59not detected
VTC1YER072W CST6P40535 587 aa5.1□□□□□ -1.59
VTC1YER072W MON2P48563 1636 aaPredicted RBP5.09□□□□□ -1.59
VTC1YER072W RPP1BP10622 106 aaKnown RBP5.09□□□□□ -1.59
VTC1YER072W VHR2P40041 505 aa5.09□□□□□ -1.59
VTC1YER072W RAD54P32863 898 aa5.07□□□□□ -1.6
VTC1YER072W STR2P47164 639 aa5.07□□□□□ -1.6
VTC1YER072W YRR1Q12172 810 aa5.07□□□□□ -1.6
VTC1YER072W MET22P32179 357 aa5.06□□□□□ -1.6
VTC1YER072W ISM1P48526 1002 aa5.06□□□□□ -1.6
VTC1YER072W LAM6Q08001 693 aa5.05□□□□□ -1.6
VTC1YER072W INO80P53115 1489 aa5.03□□□□□ -1.6
VTC1YER072W CDC4P07834 779 aa5.03□□□□□ -1.6
VTC1YER072W ENV9Q08651 330 aa5.03□□□□□ -1.6
VTC1YER072W PEX21P50091 288 aa5.02□□□□□ -1.61
VTC1YER072W NUD1P32336 851 aa5.01□□□□□ -1.61
VTC1YER072W FRK1Q03002 865 aaPredicted RBP5.01□□□□□ -1.61
VTC1YER072W SPT16P32558 1035 aaKnown RBP4.99□□□□□ -1.61
VTC1YER072W YDR444WQ04093 687 aa4.99□□□□□ -1.61
VTC1YER072W TUM1Q08686 304 aaKnown RBP4.98□□□□□ -1.61
VTC1YER072W TY1A-DR4O74302 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-HP0C2I4 478 aaKnown RBP4.97□□□□□ -1.61
VTC1YER072W TY1A-AP0CX57 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-PR1P0CX58 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-ORP0CX59 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-PR2P0CX60 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-DR5P0CX65 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-ER2P0CX66 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-GR3P0CX67 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-LR1P0CX68 440 aa4.97□□□□□ -1.61
VTC1YER072W TY1A-MR2P0CX69 440 aa4.97□□□□□ -1.61
VTC1YER072W SEC2P17065 759 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms