RNA–Protein interactions for RNA: YDR489W

SLD5, Transcript of Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p), yeastyeast

Gene SLD5, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLD5YDR489W HTA2P04912 132 aa7.77□□□□□ -1.17
SLD5YDR489W PRE3P38624 215 aa7.77□□□□□ -1.17
SLD5YDR489W DCW1P36091 449 aa7.76□□□□□ -1.17
SLD5YDR489W PTC4P38089 393 aa7.76□□□□□ -1.17
SLD5YDR489W YEL023CP39992 682 aa7.74□□□□□ -1.17
SLD5YDR489W VRP1P37370 817 aa7.63□□□□□ -1.19
SLD5YDR489W XDJ1P39102 459 aa7.63□□□□□ -1.19
SLD5YDR489W YDR344CQ05510 147 aa7.61□□□□□ -1.19
SLD5YDR489W PML39Q03760 334 aa7.6□□□□□ -1.19
SLD5YDR489W GRE2Q12068 342 aaKnown RBP7.59□□□□□ -1.19
SLD5YDR489W ELP4Q02884 456 aaKnown RBP7.58□□□□□ -1.2
SLD5YDR489W DPS1P04802 557 aaKnown RBP7.5□□□□□ -1.21
SLD5YDR489W MIF2P35201 549 aa7.5□□□□□ -1.21
SLD5YDR489W ATH1P48016 1211 aa7.5□□□□□ -1.21
SLD5YDR489W ARH1P48360 493 aa7.5□□□□□ -1.21
SLD5YDR489W GUT1P32190 709 aa7.49□□□□□ -1.21
SLD5YDR489W MID1P41821 548 aa7.47□□□□□ -1.21
SLD5YDR489W PTC3P34221 468 aaKnown RBP7.46□□□□□ -1.22
SLD5YDR489W MAK11P20484 414 aaKnown RBP7.45□□□□□ -1.22
SLD5YDR489W EDS1P38073 919 aa7.45□□□□□ -1.22
SLD5YDR489W NST1P53935 1240 aa7.44□□□□□ -1.22
SLD5YDR489W SPT23P35210 1082 aa7.42□□□□□ -1.22
SLD5YDR489W RAM2P29703 316 aa7.39□□□□□ -1.23
SLD5YDR489W SOL3P38858 249 aa7.39□□□□□ -1.23
SLD5YDR489W PEX29Q03370 554 aa7.39□□□□□ -1.23
SLD5YDR489W MPH3P0CE00 602 aa7.37□□□□□ -1.23
SLD5YDR489W AI4P03878 556 aa7.36□□□□□ -1.23
SLD5YDR489W HAP5Q02516 242 aa7.35□□□□□ -1.23
SLD5YDR489W COQ8P27697 501 aa7.34□□□□□ -1.23
SLD5YDR489W BNI4P53858 892 aa7.31□□□□□ -1.24
SLD5YDR489W SRC1Q03707 834 aa7.31□□□□□ -1.24
SLD5YDR489W ILV3P39522 585 aaKnown RBP7.3□□□□□ -1.24
SLD5YDR489W YML082WQ04533 649 aaKnown RBP7.3□□□□□ -1.24
SLD5YDR489W PTC2P39966 464 aaKnown RBP7.29□□□□□ -1.24
SLD5YDR489W RGA2Q06407 1009 aa7.26□□□□□ -1.25
SLD5YDR489W MPC54Q08550 464 aa7.26□□□□□ -1.25
SLD5YDR489W YGR273CP53329 174 aa7.24□□□□□ -1.25
SLD5YDR489W NMA111P53920 997 aa7.22□□□□□ -1.25
SLD5YDR489W NOP53Q12080 455 aaKnown RBP7.19□□□□□ -1.26
SLD5YDR489W SLI15P38283 698 aa7.18□□□□□ -1.26
SLD5YDR489W RGA1P39083 1007 aa7.18□□□□□ -1.26
SLD5YDR489W DPL1Q05567 589 aa7.17□□□□□ -1.26
SLD5YDR489W RAS1P01119 309 aa7.16□□□□□ -1.26
SLD5YDR489W YPR015CQ12531 247 aa7.12□□□□□ -1.27
SLD5YDR489W RAM1P22007 431 aa7.09□□□□□ -1.27
SLD5YDR489W ISU2Q12056 156 aa7.09□□□□□ -1.27
SLD5YDR489W GYP1Q08484 637 aa7.06□□□□□ -1.28
SLD5YDR489W KEX1P09620 729 aa7.05□□□□□ -1.28
SLD5YDR489W AMS1P22855 1083 aa7.04□□□□□ -1.28
SLD5YDR489W TRK1P12685 1235 aa7.02□□□□□ -1.29
SLD5YDR489W CDC73Q06697 393 aa7.02□□□□□ -1.29
SLD5YDR489W RQC2Q12532 1038 aaKnown RBP7.02□□□□□ -1.29
SLD5YDR489W PDR1P12383 1068 aa6.98□□□□□ -1.29
SLD5YDR489W SAS4Q04003 481 aa6.97□□□□□ -1.29
SLD5YDR489W SDH2P21801 266 aa6.96□□□□□ -1.3
SLD5YDR489W YLR326WQ06170 240 aaKnown RBP6.94□□□□□ -1.3
SLD5YDR489W UBP14P38237 781 aaKnown RBP6.93□□□□□ -1.3
SLD5YDR489W YEL077CQ3E7X8 1277 aa6.91□□□□□ -1.3
SLD5YDR489W PCS60P38137 543 aaKnown RBP RIP-Chip data6.9□□□□□ -1.3not detected
SLD5YDR489W VHR2P40041 505 aa6.9□□□□□ -1.3
SLD5YDR489W RPP1BP10622 106 aaKnown RBP6.87□□□□□ -1.31
SLD5YDR489W MRF1P30775 413 aaPredicted RBP6.87□□□□□ -1.31
SLD5YDR489W RAD54P32863 898 aa6.87□□□□□ -1.31
SLD5YDR489W SET1P38827 1080 aaKnown RBP6.86□□□□□ -1.31
SLD5YDR489W DMA1P38823 416 aa6.84□□□□□ -1.31
SLD5YDR489W BUD20Q08004 166 aaPredicted RBP6.84□□□□□ -1.31
SLD5YDR489W YPL062WQ02781 134 aa6.83□□□□□ -1.32
SLD5YDR489W PRT1P06103 763 aaKnown RBP6.81□□□□□ -1.32
SLD5YDR489W YRR1Q12172 810 aa6.8□□□□□ -1.32
SLD5YDR489W PEX21P50091 288 aa6.78□□□□□ -1.32
SLD5YDR489W ERG12P07277 443 aa6.77□□□□□ -1.33
SLD5YDR489W STR2P47164 639 aa6.76□□□□□ -1.33
SLD5YDR489W BRE2P43132 505 aa6.75□□□□□ -1.33
SLD5YDR489W ISM1P48526 1002 aa6.75□□□□□ -1.33
SLD5YDR489W YDR090CQ03193 310 aa6.75□□□□□ -1.33
SLD5YDR489W KIC1P38692 1080 aa6.74□□□□□ -1.33
SLD5YDR489W AIR1P40507 360 aaKnown RBP6.74□□□□□ -1.33
SLD5YDR489W GCR2Q01722 534 aa6.74□□□□□ -1.33
SLD5YDR489W GAP1P19145 602 aaPredicted RBP6.72□□□□□ -1.33
SLD5YDR489W GAR1P28007 205 aaKnown RBP6.72□□□□□ -1.33
SLD5YDR489W NUD1P32336 851 aa6.72□□□□□ -1.33
SLD5YDR489W CST6P40535 587 aa6.72□□□□□ -1.33
SLD5YDR489W CLA4P48562 842 aa6.71□□□□□ -1.34
SLD5YDR489W CSC1Q06538 782 aa6.71□□□□□ -1.34
SLD5YDR489W TUM1Q08686 304 aaKnown RBP6.71□□□□□ -1.34
SLD5YDR489W TFB4Q12004 338 aa6.71□□□□□ -1.34
SLD5YDR489W GBP2P25555 427 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
SLD5YDR489W NPL4P33755 580 aa6.68□□□□□ -1.34
SLD5YDR489W GCD11P32481 527 aaKnown RBP6.67□□□□□ -1.34
SLD5YDR489W LAM6Q08001 693 aa6.67□□□□□ -1.34
SLD5YDR489W SPT16P32558 1035 aaKnown RBP6.66□□□□□ -1.34
SLD5YDR489W SEC2P17065 759 aa6.65□□□□□ -1.34
SLD5YDR489W IFH1P39520 1085 aa6.65□□□□□ -1.34
SLD5YDR489W TY1A-DR4O74302 440 aa6.64□□□□□ -1.35
SLD5YDR489W TY1A-HP0C2I4 478 aaKnown RBP6.64□□□□□ -1.35
SLD5YDR489W TY1A-AP0CX57 440 aa6.64□□□□□ -1.35
SLD5YDR489W TY1A-PR1P0CX58 440 aa6.64□□□□□ -1.35
SLD5YDR489W TY1A-ORP0CX59 440 aa6.64□□□□□ -1.35
SLD5YDR489W TY1A-PR2P0CX60 440 aa6.64□□□□□ -1.35
SLD5YDR489W TY1A-DR5P0CX65 440 aa6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms