RNA–Protein interactions for RNA: YDR435C

PPM1, Transcript of Carboxyl methyltransferase, yeastyeast

Gene PPM1, Length 987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PPM1YDR435C MHP1P43638 1398 aa7.86□□□□□ -1.15
PPM1YDR435C CDC27P38042 758 aa7.86□□□□□ -1.15
PPM1YDR435C NUP159P40477 1460 aa7.86□□□□□ -1.15
PPM1YDR435C RPL17AP05740 184 aaKnown RBP7.85□□□□□ -1.15
PPM1YDR435C RPL17BP46990 184 aaKnown RBP7.85□□□□□ -1.15
PPM1YDR435C PSD2P53037 1138 aaKnown RBP7.85□□□□□ -1.15
PPM1YDR435C RPO31P04051 1460 aa7.85□□□□□ -1.15
PPM1YDR435C IRC20Q06554 1556 aa7.84□□□□□ -1.15
PPM1YDR435C RPC31P17890 251 aa7.84□□□□□ -1.15
PPM1YDR435C MAP2P38174 421 aaKnown RBP7.84□□□□□ -1.15
PPM1YDR435C OPY1P38271 328 aa7.84□□□□□ -1.15
PPM1YDR435C UBP10P53874 792 aaPredicted RBP7.84□□□□□ -1.15
PPM1YDR435C ULS1Q08562 1619 aa7.83□□□□□ -1.16
PPM1YDR435C AVT3P36062 692 aa7.83□□□□□ -1.16
PPM1YDR435C YFR016CP43597 1233 aaKnown RBP7.83□□□□□ -1.16
PPM1YDR435C VPS15P22219 1454 aa7.81□□□□□ -1.16
PPM1YDR435C TY3B-GQ99315 1547 aa7.8□□□□□ -1.16
PPM1YDR435C DNF1P32660 1571 aa7.8□□□□□ -1.16
PPM1YDR435C TY1B-DR3Q99231 1755 aa7.79□□□□□ -1.16
PPM1YDR435C ESC1Q03661 1658 aaKnown RBP7.78□□□□□ -1.16
PPM1YDR435C SNF7P39929 240 aaKnown RBP7.77□□□□□ -1.17
PPM1YDR435C GCN2P15442 1659 aa7.76□□□□□ -1.17
PPM1YDR435C QCR6P00127 147 aa7.75□□□□□ -1.17
PPM1YDR435C PDR5P33302 1511 aaKnown RBP7.74□□□□□ -1.17
PPM1YDR435C TY2B-LR1P0C2J3 1770 aa7.74□□□□□ -1.17
PPM1YDR435C TY2B-FP0CX63 1770 aa7.74□□□□□ -1.17
PPM1YDR435C TY2B-GR2P0CX64 1770 aa7.74□□□□□ -1.17
PPM1YDR435C TY2B-CP25384 1770 aa7.74□□□□□ -1.17
PPM1YDR435C TY2B-DR2Q03494 1770 aa7.74□□□□□ -1.17
PPM1YDR435C TY1B-DR1Q03855 1755 aa7.74□□□□□ -1.17
PPM1YDR435C TY2B-DR3Q07791 1770 aaKnown RBP7.74□□□□□ -1.17
PPM1YDR435C TY2B-OR1Q12113 1770 aa7.74□□□□□ -1.17
PPM1YDR435C TY2B-DR1Q12472 1770 aa7.74□□□□□ -1.17
PPM1YDR435C TY2B-OR2Q12501 1770 aa7.74□□□□□ -1.17
PPM1YDR435C YBT1P32386 1661 aa7.73□□□□□ -1.17
PPM1YDR435C LEO1P38439 464 aa7.72□□□□□ -1.17
PPM1YDR435C FPR3P38911 411 aaKnown RBP7.72□□□□□ -1.17
PPM1YDR435C YIR014WP40570 242 aa7.72□□□□□ -1.17
PPM1YDR435C NOP7P53261 605 aaKnown RBP7.72□□□□□ -1.17
PPM1YDR435C URN1Q06525 465 aaKnown RBP7.71□□□□□ -1.18
PPM1YDR435C TY2B-BQ12491 1770 aa7.71□□□□□ -1.18
PPM1YDR435C MMS1Q06211 1407 aa7.69□□□□□ -1.18
PPM1YDR435C ABP1P15891 592 aaKnown RBP7.69□□□□□ -1.18
PPM1YDR435C RPP0P05317 312 aaKnown RBP7.68□□□□□ -1.18
PPM1YDR435C ROX1P25042 368 aa7.68□□□□□ -1.18
PPM1YDR435C CDC45Q08032 650 aa7.67□□□□□ -1.18
PPM1YDR435C FUN12P39730 1002 aaKnown RBP7.66□□□□□ -1.18
PPM1YDR435C CAT8P39113 1433 aa7.66□□□□□ -1.18
PPM1YDR435C VPS27P40343 622 aaKnown RBP7.65□□□□□ -1.18
PPM1YDR435C PDS5Q04264 1277 aa7.65□□□□□ -1.18
PPM1YDR435C GEA2P39993 1459 aaKnown RBP7.64□□□□□ -1.19
PPM1YDR435C SNT2P53127 1403 aa7.64□□□□□ -1.19
PPM1YDR435C GDB1Q06625 1536 aa7.63□□□□□ -1.19
PPM1YDR435C AIM44Q99299 758 aa7.63□□□□□ -1.19
PPM1YDR435C VTH1P40438 1549 aa7.62□□□□□ -1.19
PPM1YDR435C VTH2P40890 1549 aa7.62□□□□□ -1.19
PPM1YDR435C TY3B-IQ7LHG5 1498 aaKnown RBP7.62□□□□□ -1.19
PPM1YDR435C PAF1P38351 445 aa7.62□□□□□ -1.19
PPM1YDR435C TY1B-HO13535 1793 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-DR5P0C2I2 1755 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-DR6P0C2I3 1755 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-LR2P0C2I5 1755 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-LR3P0C2I6 1755 aaKnown RBP7.61□□□□□ -1.19
PPM1YDR435C TY1B-PR1P0C2I9 1755 aaKnown RBP7.61□□□□□ -1.19
PPM1YDR435C TY1B-PR2P0C2J0 1756 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-PR3P0C2J1 1755 aaKnown RBP7.61□□□□□ -1.19
PPM1YDR435C TY1B-JR1P47098 1755 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-ML2Q03434 1755 aaKnown RBP7.61□□□□□ -1.19
PPM1YDR435C TY1B-ER1Q03612 1755 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-ML1Q04711 1755 aaKnown RBP7.61□□□□□ -1.19
PPM1YDR435C TY1B-GR2Q12269 1755 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-OLQ12273 1755 aa7.61□□□□□ -1.19
PPM1YDR435C TY1B-PLQ12414 1755 aaKnown RBP7.61□□□□□ -1.19
PPM1YDR435C ORC1P54784 914 aaPredicted RBP7.61□□□□□ -1.19
PPM1YDR435C YRB30P53107 440 aaPredicted RBP7.6□□□□□ -1.19
PPM1YDR435C RVB2Q12464 471 aaKnown RBP7.6□□□□□ -1.19
PPM1YDR435C ARO1P08566 1588 aaKnown RBP7.59□□□□□ -1.19
PPM1YDR435C SLN1P39928 1220 aaPredicted RBP7.59□□□□□ -1.19
PPM1YDR435C MDS3P53094 1487 aa7.58□□□□□ -1.2
PPM1YDR435C TGL3P40308 642 aa7.58□□□□□ -1.2
PPM1YDR435C EDE1P34216 1381 aa7.58□□□□□ -1.2
PPM1YDR435C TIF4632P39936 914 aaKnown RBP7.57□□□□□ -1.2
PPM1YDR435C RLF2Q12495 606 aa7.57□□□□□ -1.2
PPM1YDR435C PCT1P13259 424 aa7.56□□□□□ -1.2
PPM1YDR435C VPS24P36095 224 aaKnown RBP7.56□□□□□ -1.2
PPM1YDR435C NOT3P06102 836 aaKnown RBP7.55□□□□□ -1.2
PPM1YDR435C YGR130CP53278 816 aa7.55□□□□□ -1.2
PPM1YDR435C NST1P53935 1240 aa7.55□□□□□ -1.2
PPM1YDR435C NOP58Q12499 511 aaKnown RBP7.55□□□□□ -1.2
PPM1YDR435C TY1B-BRQ12193 1756 aa7.54□□□□□ -1.2
PPM1YDR435C TY1B-GR3Q12316 1755 aa7.54□□□□□ -1.2
PPM1YDR435C TY1B-ORQ92393 1755 aa7.54□□□□□ -1.2
PPM1YDR435C DMA1P38823 416 aa7.54□□□□□ -1.2
PPM1YDR435C DJP1P40564 432 aa7.53□□□□□ -1.2
PPM1YDR435C IOC4Q04213 475 aa7.53□□□□□ -1.2
PPM1YDR435C NUP157P40064 1391 aaKnown RBP7.53□□□□□ -1.2
PPM1YDR435C TY1B-JR2P47100 1755 aaKnown RBP7.52□□□□□ -1.21
PPM1YDR435C TY1B-ER2Q03619 1755 aa7.52□□□□□ -1.21
PPM1YDR435C TY1B-MR1Q04214 1755 aa7.52□□□□□ -1.21
PPM1YDR435C TY1B-MR2Q04670 1755 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms