RNA–Protein interactions for RNA: YDR172W

SUP35, Transcript of Translation termination factor eRF3, yeast

Gene SUP35, Length 2,058 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUP35	YDR172W	SMC4	Q12267	1418 aa		7.11	□□□□□ -1.27
SUP35	YDR172W	MYO4	P32492	1471 aa		7.1	□□□□□ -1.27
SUP35	YDR172W	MMS22	Q06164	1454 aa		7.1	□□□□□ -1.27
SUP35	YDR172W	TIF4632	P39936	914 aa	Known RBP	7.09	□□□□□ -1.27
SUP35	YDR172W	TY1B-BR	Q12193	1756 aa		7.08	□□□□□ -1.28
SUP35	YDR172W	TY1B-GR3	Q12316	1755 aa		7.08	□□□□□ -1.28
SUP35	YDR172W	TY1B-OR	Q92393	1755 aa		7.08	□□□□□ -1.28
SUP35	YDR172W	MRM1	P25270	412 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TGL3	P40308	642 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-H	O13535	1793 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-DR5	P0C2I2	1755 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-DR6	P0C2I3	1755 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-LR2	P0C2I5	1755 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-PR2	P0C2J0	1756 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-JR1	P47098	1755 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-ML2	Q03434	1755 aa	Known RBP	7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-ER1	Q03612	1755 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-ML1	Q04711	1755 aa	Known RBP	7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-GR2	Q12269	1755 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-OL	Q12273	1755 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	TY1B-PL	Q12414	1755 aa	Known RBP	7.07	□□□□□ -1.28
SUP35	YDR172W	CDC25	P04821	1589 aa		7.07	□□□□□ -1.28
SUP35	YDR172W	SAS10	Q12136	610 aa	Predicted RBP	7.07	□□□□□ -1.28
SUP35	YDR172W	RQC2	Q12532	1038 aa	Known RBP	7.04	□□□□□ -1.28
SUP35	YDR172W	ESC1	Q03661	1658 aa	Known RBP	7.03	□□□□□ -1.28
SUP35	YDR172W	SPP41	P38904	1435 aa		7.01	□□□□□ -1.29
SUP35	YDR172W	MLP2	P40457	1679 aa		7	□□□□□ -1.29
SUP35	YDR172W	PAN1	P32521	1480 aa		7	□□□□□ -1.29
SUP35	YDR172W	SNQ2	P32568	1501 aa	Known RBP	6.98	□□□□□ -1.29
SUP35	YDR172W	VTH1	P40438	1549 aa		6.98	□□□□□ -1.29
SUP35	YDR172W	VTH2	P40890	1549 aa		6.98	□□□□□ -1.29
SUP35	YDR172W	RCR1	P38212	213 aa		6.96	□□□□□ -1.29
SUP35	YDR172W	TY1B-JR2	P47100	1755 aa	Known RBP	6.95	□□□□□ -1.3
SUP35	YDR172W	TY1B-ER2	Q03619	1755 aa		6.95	□□□□□ -1.3
SUP35	YDR172W	TY1B-MR1	Q04214	1755 aa		6.95	□□□□□ -1.3
SUP35	YDR172W	TY1B-MR2	Q04670	1755 aa	Known RBP	6.95	□□□□□ -1.3
SUP35	YDR172W	TY1B-LR1	Q12088	1755 aa	Known RBP	6.95	□□□□□ -1.3
SUP35	YDR172W	TY1B-NL1	Q12112	1755 aa		6.95	□□□□□ -1.3
SUP35	YDR172W	TY1B-GR1	Q12141	1755 aa		6.95	□□□□□ -1.3
SUP35	YDR172W	TY1B-BL	Q12490	1755 aa		6.95	□□□□□ -1.3
SUP35	YDR172W	RPA190	P10964	1664 aa	Known RBP	6.95	□□□□□ -1.3
SUP35	YDR172W	TSC11	P40061	1430 aa		6.95	□□□□□ -1.3
SUP35	YDR172W	RTG3	P38165	486 aa		6.94	□□□□□ -1.3
SUP35	YDR172W	DNF1	P32660	1571 aa		6.94	□□□□□ -1.3
SUP35	YDR172W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.94	□□□□□ -1.3	not detected
SUP35	YDR172W	NTE1	Q04958	1679 aa		6.94	□□□□□ -1.3
SUP35	YDR172W	STH1	P32597	1359 aa		6.93	□□□□□ -1.3
SUP35	YDR172W	VPS29	P38759	282 aa		6.93	□□□□□ -1.3
SUP35	YDR172W	PDR15	Q04182	1529 aa	Known RBP	6.93	□□□□□ -1.3
SUP35	YDR172W	TRM732	Q03496	1420 aa		6.93	□□□□□ -1.3
SUP35	YDR172W	ULS1	Q08562	1619 aa		6.92	□□□□□ -1.3
SUP35	YDR172W	RPO21	P04050	1733 aa	Known RBP	6.89	□□□□□ -1.31
SUP35	YDR172W	RAM2	P29703	316 aa		6.89	□□□□□ -1.31
SUP35	YDR172W	TAF7	Q05021	590 aa		6.89	□□□□□ -1.31
SUP35	YDR172W	YAP5	P40574	245 aa		6.88	□□□□□ -1.31
SUP35	YDR172W	IFH1	P39520	1085 aa		6.88	□□□□□ -1.31
SUP35	YDR172W	MST1	P07236	462 aa		6.86	□□□□□ -1.31
SUP35	YDR172W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	6.85	□□□□□ -1.31	not detected
SUP35	YDR172W	YOR238W	Q08634	303 aa		6.85	□□□□□ -1.31
SUP35	YDR172W	DMA1	P38823	416 aa		6.85	□□□□□ -1.31
SUP35	YDR172W	SNT2	P53127	1403 aa		6.84	□□□□□ -1.31
SUP35	YDR172W	NUP159	P40477	1460 aa		6.84	□□□□□ -1.32
SUP35	YDR172W	STS1	P38637	319 aa		6.83	□□□□□ -1.32
SUP35	YDR172W	GEA1	P47102	1408 aa	Predicted RBP	6.83	□□□□□ -1.32
SUP35	YDR172W	IKI3	Q06706	1349 aa	Known RBP	6.82	□□□□□ -1.32
SUP35	YDR172W	DBP1	P24784	617 aa	Known RBP	6.82	□□□□□ -1.32
SUP35	YDR172W	GEA2	P39993	1459 aa	Known RBP	6.82	□□□□□ -1.32
SUP35	YDR172W	YFR006W	P43590	535 aa		6.81	□□□□□ -1.32
SUP35	YDR172W	PIB1	Q06651	286 aa		6.81	□□□□□ -1.32
SUP35	YDR172W	MET5	P47169	1442 aa		6.81	□□□□□ -1.32
SUP35	YDR172W	YRF1-1	P0CX20	1796 aa		6.79	□□□□□ -1.32
SUP35	YDR172W	YRF1-5	P0CX21	1796 aa		6.79	□□□□□ -1.32
SUP35	YDR172W	YRF1-8	P0CX22	1796 aa		6.79	□□□□□ -1.32
SUP35	YDR172W	RTT106	P40161	455 aa		6.79	□□□□□ -1.32
SUP35	YDR172W	IRC20	Q06554	1556 aa		6.79	□□□□□ -1.32
SUP35	YDR172W	YBT1	P32386	1661 aa		6.79	□□□□□ -1.32
SUP35	YDR172W	MAK11	P20484	414 aa	Known RBP	6.78	□□□□□ -1.32
SUP35	YDR172W	TY3B-G	Q99315	1547 aa		6.78	□□□□□ -1.32
SUP35	YDR172W	SSM4	P40318	1319 aa		6.78	□□□□□ -1.32
SUP35	YDR172W	VPS15	P22219	1454 aa		6.76	□□□□□ -1.33
SUP35	YDR172W	SPO14	P36126	1683 aa		6.75	□□□□□ -1.33
SUP35	YDR172W	NUP170	P38181	1502 aa		6.74	□□□□□ -1.33
SUP35	YDR172W	PDR12	Q02785	1511 aa		6.73	□□□□□ -1.33
SUP35	YDR172W	GDB1	Q06625	1536 aa		6.73	□□□□□ -1.33
SUP35	YDR172W	CAT8	P39113	1433 aa		6.73	□□□□□ -1.33
SUP35	YDR172W	VMA1	P17255	1071 aa	Known RBP	6.71	□□□□□ -1.34
SUP35	YDR172W	PDR10	P51533	1564 aa		6.71	□□□□□ -1.34
SUP35	YDR172W	COQ8	P27697	501 aa		6.69	□□□□□ -1.34
SUP35	YDR172W	MET10	P39692	1035 aa		6.69	□□□□□ -1.34
SUP35	YDR172W	GTT3	P39996	337 aa		6.69	□□□□□ -1.34
SUP35	YDR172W	ARO1	P08566	1588 aa	Known RBP	6.69	□□□□□ -1.34
SUP35	YDR172W	EDS1	P38073	919 aa		6.69	□□□□□ -1.34
SUP35	YDR172W	BUD31	P25337	157 aa	Predicted RBP	6.68	□□□□□ -1.34
SUP35	YDR172W	NUP157	P40064	1391 aa	Known RBP	6.68	□□□□□ -1.34
SUP35	YDR172W	LTE1	P07866	1435 aa		6.67	□□□□□ -1.34
SUP35	YDR172W	MIF2	P35201	549 aa		6.67	□□□□□ -1.34
SUP35	YDR172W	SET1	P38827	1080 aa	Known RBP	6.67	□□□□□ -1.34

Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms