RNA–Protein interactions for RNA: YDR034C-D

YDR034C-D, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeast

Gene YDR034C-D, Length 5,313 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR034C-D	YDR034C-D	NOB1	Q08444	459 aa	Known RBP	4.28	□□□□□ -1.72
YDR034C-D	YDR034C-D	STS1	P38637	319 aa		4.28	□□□□□ -1.72
YDR034C-D	YDR034C-D	ERG12	P07277	443 aa		4.26	□□□□□ -1.73
YDR034C-D	YDR034C-D	UBP14	P38237	781 aa	Known RBP	4.26	□□□□□ -1.73
YDR034C-D	YDR034C-D	SSF1	P38789	453 aa	Predicted RBP	4.24	□□□□□ -1.73
YDR034C-D	YDR034C-D	TIF1	P10081	395 aa	Known RBP	4.24	□□□□□ -1.73
YDR034C-D	YDR034C-D	ATF2	P53296	535 aa		4.24	□□□□□ -1.73
YDR034C-D	YDR034C-D	TTI1	P36097	1038 aa		4.23	□□□□□ -1.73
YDR034C-D	YDR034C-D	MRPL32	P25348	183 aa		4.23	□□□□□ -1.73
YDR034C-D	YDR034C-D	RRN6	P32786	894 aa		4.23	□□□□□ -1.73
YDR034C-D	YDR034C-D	BIO2	P32451	375 aa		4.22	□□□□□ -1.73
YDR034C-D	YDR034C-D	YJL007C	P47080	104 aa		4.22	□□□□□ -1.73
YDR034C-D	YDR034C-D	SSA4	P22202	642 aa	Known RBP	4.22	□□□□□ -1.73
YDR034C-D	YDR034C-D	YCK3	P39962	524 aa		4.22	□□□□□ -1.73
YDR034C-D	YDR034C-D	BRL1	P38770	471 aa		4.21	□□□□□ -1.73
YDR034C-D	YDR034C-D	OCA5	P38738	679 aa		4.21	□□□□□ -1.74
YDR034C-D	YDR034C-D	CPS1	P27614	576 aa		4.21	□□□□□ -1.74
YDR034C-D	YDR034C-D	PTC3	P34221	468 aa	Known RBP	4.21	□□□□□ -1.74
YDR034C-D	YDR034C-D	CSN12	P47130	423 aa		4.21	□□□□□ -1.74
YDR034C-D	YDR034C-D	ATG36	P46983	293 aa		4.2	□□□□□ -1.74
YDR034C-D	YDR034C-D	YLR326W	Q06170	240 aa	Known RBP	4.2	□□□□□ -1.74
YDR034C-D	YDR034C-D	RRP15	Q06511	250 aa	Predicted RBP	4.2	□□□□□ -1.74
YDR034C-D	YDR034C-D	YML083C	Q04526	418 aa		4.2	□□□□□ -1.74
YDR034C-D	YDR034C-D	PUP1	P25043	261 aa		4.2	□□□□□ -1.74
YDR034C-D	YDR034C-D	SSA2	P10592	639 aa	Known RBP	4.2	□□□□□ -1.74
YDR034C-D	YDR034C-D	SNU71	P53207	620 aa	Known RBP	4.2	□□□□□ -1.74
YDR034C-D	YDR034C-D	MIF2	P35201	549 aa		4.19	□□□□□ -1.74
YDR034C-D	YDR034C-D	PSE1	P32337	1089 aa	Known RBP	4.18	□□□□□ -1.74
YDR034C-D	YDR034C-D	YTA7	P40340	1379 aa		4.18	□□□□□ -1.74
YDR034C-D	YDR034C-D	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YDR034C-D	YDR034C-D	NOP7	P53261	605 aa	Known RBP	4.18	□□□□□ -1.74
YDR034C-D	YDR034C-D	CDC3	P32457	520 aa	Known RBP	4.18	□□□□□ -1.74
YDR034C-D	YDR034C-D	HEM3	P28789	327 aa		4.17	□□□□□ -1.74
YDR034C-D	YDR034C-D	SUP45	P12385	437 aa	Known RBP	4.17	□□□□□ -1.74
YDR034C-D	YDR034C-D	DOS2	P54858	310 aa		4.17	□□□□□ -1.74
YDR034C-D	YDR034C-D	MRX10	Q05648	414 aa		4.16	□□□□□ -1.74
YDR034C-D	YDR034C-D	ORC6	P38826	435 aa		4.16	□□□□□ -1.74
YDR034C-D	YDR034C-D	VHR2	P40041	505 aa		4.16	□□□□□ -1.74
YDR034C-D	YDR034C-D	SPC42	P36094	363 aa		4.16	□□□□□ -1.74
YDR034C-D	YDR034C-D	TYW1	Q08960	810 aa	Known RBP	4.16	□□□□□ -1.74
YDR034C-D	YDR034C-D	FAR11	P53917	953 aa		4.16	□□□□□ -1.74
YDR034C-D	YDR034C-D	DBP1	P24784	617 aa	Known RBP	4.15	□□□□□ -1.74
YDR034C-D	YDR034C-D	PCS60	P38137	543 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.74	not detected
YDR034C-D	YDR034C-D	SOL3	P38858	249 aa		4.15	□□□□□ -1.74
YDR034C-D	YDR034C-D	NST1	P53935	1240 aa		4.15	□□□□□ -1.74
YDR034C-D	YDR034C-D	ALD2	P47771	506 aa		4.14	□□□□□ -1.75
YDR034C-D	YDR034C-D	MET10	P39692	1035 aa		4.14	□□□□□ -1.75
YDR034C-D	YDR034C-D	YFR006W	P43590	535 aa		4.14	□□□□□ -1.75
YDR034C-D	YDR034C-D	SLD2	P34252	453 aa		4.14	□□□□□ -1.75
YDR034C-D	YDR034C-D	IPL1	P38991	367 aa		4.14	□□□□□ -1.75
YDR034C-D	YDR034C-D	LAM6	Q08001	693 aa		4.14	□□□□□ -1.75
YDR034C-D	YDR034C-D	RTG2	P32608	588 aa	Known RBP	4.13	□□□□□ -1.75
YDR034C-D	YDR034C-D	SCY1	P53009	804 aa		4.13	□□□□□ -1.75
YDR034C-D	YDR034C-D	HAT1	Q12341	374 aa		4.13	□□□□□ -1.75
YDR034C-D	YDR034C-D	YPR204W	Q08995	1032 aa		4.13	□□□□□ -1.75
YDR034C-D	YDR034C-D	ATE1	P16639	503 aa		4.13	□□□□□ -1.75
YDR034C-D	YDR034C-D	GAP1	P19145	602 aa	Predicted RBP	4.13	□□□□□ -1.75
YDR034C-D	YDR034C-D	TRL1	P09880	827 aa	Known RBP	4.12	□□□□□ -1.75
YDR034C-D	YDR034C-D	NIS1	P53939	407 aa		4.12	□□□□□ -1.75
YDR034C-D	YDR034C-D	RGR1	P19263	1082 aa		4.12	□□□□□ -1.75
YDR034C-D	YDR034C-D	PEP12	P32854	288 aa		4.12	□□□□□ -1.75
YDR034C-D	YDR034C-D	RIM21	P48565	533 aa		4.12	□□□□□ -1.75
YDR034C-D	YDR034C-D	TOP1	P04786	769 aa		4.11	□□□□□ -1.75
YDR034C-D	YDR034C-D	ENO1	P00924	437 aa	Known RBP	4.11	□□□□□ -1.75
YDR034C-D	YDR034C-D	YNL108C	P53929	270 aa		4.11	□□□□□ -1.75
YDR034C-D	YDR034C-D	RDS2	P19541	446 aa	Known RBP	4.11	□□□□□ -1.75
YDR034C-D	YDR034C-D	YGR273C	P53329	174 aa		4.11	□□□□□ -1.75
YDR034C-D	YDR034C-D	YDJ1	P25491	409 aa	Known RBP	4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	RSC30	P38781	883 aa		4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	STB3	Q12427	513 aa		4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	TPS3	P38426	1054 aa	Known RBP	4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	ENO2	P00925	437 aa	Known RBP	4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	KEX1	P09620	729 aa		4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	YBL036C	P38197	257 aa		4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	HST2	P53686	357 aa		4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	RAD59	Q12223	238 aa		4.1	□□□□□ -1.75
YDR034C-D	YDR034C-D	WHI5	Q12416	295 aa		4.09	□□□□□ -1.75
YDR034C-D	YDR034C-D	CSE4	P36012	229 aa		4.09	□□□□□ -1.75
YDR034C-D	YDR034C-D	TEA1	P47988	759 aa		4.09	□□□□□ -1.75
YDR034C-D	YDR034C-D	RPL34A	P87262	121 aa	Predicted RBP	4.09	□□□□□ -1.75
YDR034C-D	YDR034C-D	TGL4	P36165	910 aa		4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	FPK1	P53739	893 aa		4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	MAG2	Q06436	670 aa	Known RBP	4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	MAP2	P38174	421 aa	Known RBP	4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	PRY3	P47033	881 aa		4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	YJU3	P28321	313 aa		4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	ERP5	P38819	212 aa		4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	MVP1	P40959	511 aa	Known RBP	4.08	□□□□□ -1.76
YDR034C-D	YDR034C-D	SIT4	P20604	311 aa		4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	SCJ1	P25303	377 aa		4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	MDJ2	P42834	146 aa		4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	VMA1	P17255	1071 aa	Known RBP	4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	BRN1	P38170	754 aa		4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	YOR238W	Q08634	303 aa		4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	MSC6	Q08818	692 aa	Known RBP	4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	RPL34B	P40525	121 aa	Known RBP	4.07	□□□□□ -1.76
YDR034C-D	YDR034C-D	ALD4	P46367	519 aa	Known RBP	4.06	□□□□□ -1.76
YDR034C-D	YDR034C-D	GUT1	P32190	709 aa		4.06	□□□□□ -1.76
YDR034C-D	YDR034C-D	ILV3	P39522	585 aa	Known RBP	4.06	□□□□□ -1.76
YDR034C-D	YDR034C-D	YBL113C	Q7M4S9	792 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 38.3 ms