RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W HTA2P04912 132 aa6.77□□□□□ -1.33
CDC36YDL165W DCW1P36091 449 aa6.77□□□□□ -1.33
CDC36YDL165W PRE3P38624 215 aa6.77□□□□□ -1.33
CDC36YDL165W PTC4P38089 393 aa6.75□□□□□ -1.33
CDC36YDL165W YEL023CP39992 682 aa6.74□□□□□ -1.33
CDC36YDL165W YDR344CQ05510 147 aa6.65□□□□□ -1.34
CDC36YDL165W VRP1P37370 817 aa6.64□□□□□ -1.35
CDC36YDL165W XDJ1P39102 459 aa6.63□□□□□ -1.35
CDC36YDL165W PML39Q03760 334 aa6.62□□□□□ -1.35
CDC36YDL165W GRE2Q12068 342 aaKnown RBP6.62□□□□□ -1.35
CDC36YDL165W ELP4Q02884 456 aaKnown RBP6.6□□□□□ -1.35
CDC36YDL165W GUT1P32190 709 aa6.54□□□□□ -1.36
CDC36YDL165W MIF2P35201 549 aa6.54□□□□□ -1.36
CDC36YDL165W ATH1P48016 1211 aa6.54□□□□□ -1.36
CDC36YDL165W ARH1P48360 493 aa6.54□□□□□ -1.36
CDC36YDL165W EDS1P38073 919 aa6.53□□□□□ -1.36
CDC36YDL165W NST1P53935 1240 aa6.53□□□□□ -1.36
CDC36YDL165W DPS1P04802 557 aaKnown RBP6.52□□□□□ -1.37
CDC36YDL165W MAK11P20484 414 aaKnown RBP6.52□□□□□ -1.37
CDC36YDL165W PTC3P34221 468 aaKnown RBP6.52□□□□□ -1.37
CDC36YDL165W MID1P41821 548 aa6.51□□□□□ -1.37
CDC36YDL165W RAM2P29703 316 aa6.48□□□□□ -1.37
CDC36YDL165W SOL3P38858 249 aa6.47□□□□□ -1.37
CDC36YDL165W SPT23P35210 1082 aa6.46□□□□□ -1.38
CDC36YDL165W MPH3P0CE00 602 aa6.44□□□□□ -1.38
CDC36YDL165W PEX29Q03370 554 aa6.44□□□□□ -1.38
CDC36YDL165W AI4P03878 556 aa6.43□□□□□ -1.38
CDC36YDL165W COQ8P27697 501 aa6.43□□□□□ -1.38
CDC36YDL165W ILV3P39522 585 aaKnown RBP6.41□□□□□ -1.38
CDC36YDL165W HAP5Q02516 242 aa6.41□□□□□ -1.38
CDC36YDL165W SRC1Q03707 834 aa6.39□□□□□ -1.39
CDC36YDL165W BNI4P53858 892 aa6.38□□□□□ -1.39
CDC36YDL165W YML082WQ04533 649 aaKnown RBP6.36□□□□□ -1.39
CDC36YDL165W PTC2P39966 464 aaKnown RBP6.35□□□□□ -1.39
CDC36YDL165W MPC54Q08550 464 aa6.35□□□□□ -1.39
CDC36YDL165W YGR273CP53329 174 aa6.33□□□□□ -1.4
CDC36YDL165W RGA2Q06407 1009 aa6.31□□□□□ -1.4
CDC36YDL165W NMA111P53920 997 aa6.3□□□□□ -1.4
CDC36YDL165W NOP53Q12080 455 aaKnown RBP6.29□□□□□ -1.4
CDC36YDL165W SLI15P38283 698 aa6.27□□□□□ -1.41
CDC36YDL165W RAS1P01119 309 aa6.25□□□□□ -1.41
CDC36YDL165W RGA1P39083 1007 aa6.25□□□□□ -1.41
CDC36YDL165W DPL1Q05567 589 aa6.25□□□□□ -1.41
CDC36YDL165W YPR015CQ12531 247 aa6.23□□□□□ -1.41
CDC36YDL165W RAM1P22007 431 aa6.2□□□□□ -1.42
CDC36YDL165W ISU2Q12056 156 aa6.18□□□□□ -1.42
CDC36YDL165W KEX1P09620 729 aa6.16□□□□□ -1.42
CDC36YDL165W AMS1P22855 1083 aa6.14□□□□□ -1.43
CDC36YDL165W CDC73Q06697 393 aa6.14□□□□□ -1.43
CDC36YDL165W GYP1Q08484 637 aa6.14□□□□□ -1.43
CDC36YDL165W TRK1P12685 1235 aa6.12□□□□□ -1.43
CDC36YDL165W PDR1P12383 1068 aa6.11□□□□□ -1.43
CDC36YDL165W SDH2P21801 266 aa6.1□□□□□ -1.43
CDC36YDL165W SAS4Q04003 481 aa6.07□□□□□ -1.44
CDC36YDL165W YLR326WQ06170 240 aaKnown RBP6.07□□□□□ -1.44
CDC36YDL165W UBP14P38237 781 aaKnown RBP6.06□□□□□ -1.44
CDC36YDL165W PCS60P38137 543 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
CDC36YDL165W VHR2P40041 505 aa6.03□□□□□ -1.44
CDC36YDL165W YEL077CQ3E7X8 1277 aa6.02□□□□□ -1.45
CDC36YDL165W RAD54P32863 898 aa6.01□□□□□ -1.45
CDC36YDL165W SET1P38827 1080 aaKnown RBP6.01□□□□□ -1.45
CDC36YDL165W RPP1BP10622 106 aaKnown RBP5.97□□□□□ -1.45
CDC36YDL165W MRF1P30775 413 aaPredicted RBP5.97□□□□□ -1.45
CDC36YDL165W BUD20Q08004 166 aaPredicted RBP5.97□□□□□ -1.45
CDC36YDL165W YPL062WQ02781 134 aa5.95□□□□□ -1.46
CDC36YDL165W PRT1P06103 763 aaKnown RBP5.94□□□□□ -1.46
CDC36YDL165W YRR1Q12172 810 aa5.94□□□□□ -1.46
CDC36YDL165W STR2P47164 639 aa5.92□□□□□ -1.46
CDC36YDL165W YDR090CQ03193 310 aa5.92□□□□□ -1.46
CDC36YDL165W ISM1P48526 1002 aa5.9□□□□□ -1.46
CDC36YDL165W PEX21P50091 288 aa5.9□□□□□ -1.46
CDC36YDL165W ERG12P07277 443 aa5.89□□□□□ -1.47
CDC36YDL165W GAP1P19145 602 aaPredicted RBP5.89□□□□□ -1.47
CDC36YDL165W AIR1P40507 360 aaKnown RBP5.89□□□□□ -1.47
CDC36YDL165W BRE2P43132 505 aa5.89□□□□□ -1.47
CDC36YDL165W CST6P40535 587 aa5.88□□□□□ -1.47
CDC36YDL165W NUD1P32336 851 aa5.87□□□□□ -1.47
CDC36YDL165W KIC1P38692 1080 aa5.87□□□□□ -1.47
CDC36YDL165W CLA4P48562 842 aa5.87□□□□□ -1.47
CDC36YDL165W TFB4Q12004 338 aa5.87□□□□□ -1.47
CDC36YDL165W CSC1Q06538 782 aa5.86□□□□□ -1.47
CDC36YDL165W TUM1Q08686 304 aaKnown RBP5.86□□□□□ -1.47
CDC36YDL165W GAR1P28007 205 aaKnown RBP5.84□□□□□ -1.47
CDC36YDL165W GCR2Q01722 534 aa5.84□□□□□ -1.47
CDC36YDL165W LAM6Q08001 693 aa5.83□□□□□ -1.48
CDC36YDL165W TY1A-DR4O74302 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-HP0C2I4 478 aaKnown RBP5.82□□□□□ -1.48
CDC36YDL165W TY1A-AP0CX57 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-PR1P0CX58 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-ORP0CX59 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-PR2P0CX60 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-DR5P0CX65 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-ER2P0CX66 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-GR3P0CX67 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-LR1P0CX68 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-MR2P0CX69 440 aa5.82□□□□□ -1.48
CDC36YDL165W NPL4P33755 580 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-JR2P47099 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-DR1Q03856 440 aa5.82□□□□□ -1.48
CDC36YDL165W TY1A-ML1Q04706 440 aaKnown RBP5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 71.6 ms