RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF2YDL070W YFR006WP43590 535 aa8.92□□□□□ -0.98
BDF2YDL070W DRS2P39524 1355 aa8.9□□□□□ -0.98
BDF2YDL070W TY1B-JR2P47100 1755 aaKnown RBP8.89□□□□□ -0.99
BDF2YDL070W TY1B-ER2Q03619 1755 aa8.89□□□□□ -0.99
BDF2YDL070W TY1B-MR1Q04214 1755 aa8.89□□□□□ -0.99
BDF2YDL070W TY1B-MR2Q04670 1755 aaKnown RBP8.89□□□□□ -0.99
BDF2YDL070W TY1B-LR1Q12088 1755 aaKnown RBP8.89□□□□□ -0.99
BDF2YDL070W TY1B-NL1Q12112 1755 aa8.89□□□□□ -0.99
BDF2YDL070W TY1B-GR1Q12141 1755 aa8.89□□□□□ -0.99
BDF2YDL070W TY1B-BLQ12490 1755 aa8.89□□□□□ -0.99
BDF2YDL070W NUP159P40477 1460 aa8.89□□□□□ -0.99
BDF2YDL070W NTE1Q04958 1679 aa8.89□□□□□ -0.99
BDF2YDL070W VPS15P22219 1454 aa8.89□□□□□ -0.99
BDF2YDL070W SPT7P35177 1332 aa8.88□□□□□ -0.99
BDF2YDL070W STH1P32597 1359 aa8.87□□□□□ -0.99
BDF2YDL070W TAF7Q05021 590 aa8.86□□□□□ -0.99
BDF2YDL070W SMC4Q12267 1418 aa8.86□□□□□ -0.99
BDF2YDL070W IRC20Q06554 1556 aa8.85□□□□□ -0.99
BDF2YDL070W NUP170P38181 1502 aa8.85□□□□□ -0.99
BDF2YDL070W RPO21P04050 1733 aaKnown RBP8.84□□□□□ -0.99
BDF2YDL070W SEC3P33332 1336 aaKnown RBP8.84□□□□□ -0.99
BDF2YDL070W YOR1P53049 1477 aa8.84□□□□□ -0.99
BDF2YDL070W RTT106P40161 455 aa8.84□□□□□ -1
BDF2YDL070W MYO4P32492 1471 aa8.82□□□□□ -1
BDF2YDL070W CAB3P36076 571 aa8.81□□□□□ -1
BDF2YDL070W VTH1P40438 1549 aa8.8□□□□□ -1
BDF2YDL070W VTH2P40890 1549 aa8.8□□□□□ -1
BDF2YDL070W DNF2Q12675 1612 aa8.79□□□□□ -1
BDF2YDL070W TSC11P40061 1430 aa8.79□□□□□ -1
BDF2YDL070W PRS1P32895 427 aaKnown RBP8.78□□□□□ -1
BDF2YDL070W IFH1P39520 1085 aa8.77□□□□□ -1.01
BDF2YDL070W SNQ2P32568 1501 aaKnown RBP8.76□□□□□ -1.01
BDF2YDL070W EBP2P36049 427 aaKnown RBP8.75□□□□□ -1.01
BDF2YDL070W YPR148CQ06523 435 aa8.73□□□□□ -1.01
BDF2YDL070W GEA1P47102 1408 aaPredicted RBP8.71□□□□□ -1.02
BDF2YDL070W SPO14P36126 1683 aa8.7□□□□□ -1.02
BDF2YDL070W LEU3P08638 886 aa8.68□□□□□ -1.02
BDF2YDL070W ULS1Q08562 1619 aa8.68□□□□□ -1.02
BDF2YDL070W SNT2P53127 1403 aa8.68□□□□□ -1.02
BDF2YDL070W PDR10P51533 1564 aa8.68□□□□□ -1.02
BDF2YDL070W TFA1P36100 482 aa8.65□□□□□ -1.02
BDF2YDL070W PDR15Q04182 1529 aaKnown RBP8.65□□□□□ -1.02
BDF2YDL070W DOP1Q03921 1698 aa8.65□□□□□ -1.03
BDF2YDL070W MET10P39692 1035 aa8.64□□□□□ -1.03
BDF2YDL070W MLP2P40457 1679 aa8.63□□□□□ -1.03
BDF2YDL070W YOR093CQ12275 1648 aa8.62□□□□□ -1.03
BDF2YDL070W PSD2P53037 1138 aaKnown RBP8.6□□□□□ -1.03
BDF2YDL070W SRB8P25648 1427 aa8.57□□□□□ -1.04
BDF2YDL070W PDR12Q02785 1511 aa8.57□□□□□ -1.04
BDF2YDL070W TRM3Q07527 1436 aa8.56□□□□□ -1.04
BDF2YDL070W CFT1Q06632 1357 aaKnown RBP8.56□□□□□ -1.04
BDF2YDL070W YLR419WQ06698 1435 aaKnown RBP8.54□□□□□ -1.04
BDF2YDL070W IQG1Q12280 1495 aa8.54□□□□□ -1.04
BDF2YDL070W TY3B-GQ99315 1547 aa8.53□□□□□ -1.04
BDF2YDL070W IME2P32581 645 aa8.52□□□□□ -1.04
BDF2YDL070W GDB1Q06625 1536 aa8.52□□□□□ -1.05
BDF2YDL070W BUD3P25558 1636 aa8.52□□□□□ -1.05
BDF2YDL070W CLC1P17891 233 aa8.5□□□□□ -1.05
BDF2YDL070W MHP1P43638 1398 aa8.49□□□□□ -1.05
BDF2YDL070W YFR016CP43597 1233 aaKnown RBP8.48□□□□□ -1.05
BDF2YDL070W ORC1P54784 914 aaPredicted RBP8.48□□□□□ -1.05
BDF2YDL070W NUP157P40064 1391 aaKnown RBP8.48□□□□□ -1.05
BDF2YDL070W RPC31P17890 251 aa8.46□□□□□ -1.05
BDF2YDL070W CHC1P22137 1653 aaKnown RBP8.46□□□□□ -1.06
BDF2YDL070W FUN12P39730 1002 aaKnown RBP8.46□□□□□ -1.06
BDF2YDL070W NOP7P53261 605 aaKnown RBP8.45□□□□□ -1.06
BDF2YDL070W OPY1P38271 328 aa8.44□□□□□ -1.06
BDF2YDL070W DNF3Q12674 1656 aa8.42□□□□□ -1.06
BDF2YDL070W EAF7P53911 425 aaKnown RBP8.41□□□□□ -1.06
BDF2YDL070W ARO1P08566 1588 aaKnown RBP8.4□□□□□ -1.07
BDF2YDL070W SEC7P11075 2009 aaKnown RBP8.37□□□□□ -1.07
BDF2YDL070W PDS5Q04264 1277 aa8.37□□□□□ -1.07
BDF2YDL070W YBT1P32386 1661 aa8.36□□□□□ -1.07
BDF2YDL070W MNN4P36044 1178 aa8.36□□□□□ -1.07
BDF2YDL070W TCB2P48231 1178 aa8.36□□□□□ -1.07
BDF2YDL070W CAT8P39113 1433 aa8.34□□□□□ -1.07
BDF2YDL070W NST1P53935 1240 aa8.33□□□□□ -1.08
BDF2YDL070W GCN2P15442 1659 aa8.33□□□□□ -1.08
BDF2YDL070W FPR3P38911 411 aaKnown RBP8.33□□□□□ -1.08
BDF2YDL070W CKB1P43639 278 aa8.32□□□□□ -1.08
BDF2YDL070W SNF7P39929 240 aaKnown RBP8.31□□□□□ -1.08
BDF2YDL070W YAP3P38749 330 aa8.3□□□□□ -1.08
BDF2YDL070W BUD21Q08492 214 aaPredicted RBP8.29□□□□□ -1.08
BDF2YDL070W PAF1P38351 445 aa8.29□□□□□ -1.08
BDF2YDL070W CDC45Q08032 650 aa8.29□□□□□ -1.08
BDF2YDL070W RVB2Q12464 471 aaKnown RBP8.29□□□□□ -1.08
BDF2YDL070W PDR5P33302 1511 aaKnown RBP8.28□□□□□ -1.08
BDF2YDL070W USO1P25386 1790 aa8.28□□□□□ -1.08
BDF2YDL070W VPS27P40343 622 aaKnown RBP8.27□□□□□ -1.09
BDF2YDL070W RPP0P05317 312 aaKnown RBP8.25□□□□□ -1.09
BDF2YDL070W YIR014WP40570 242 aa8.25□□□□□ -1.09
BDF2YDL070W MAK10Q02197 733 aa8.25□□□□□ -1.09
BDF2YDL070W TY3B-IQ7LHG5 1498 aaKnown RBP8.24□□□□□ -1.09
BDF2YDL070W SIS2P36024 562 aa8.24□□□□□ -1.09
BDF2YDL070W LEO1P38439 464 aa8.24□□□□□ -1.09
BDF2YDL070W FAP1P53971 965 aa8.24□□□□□ -1.09
BDF2YDL070W ROX1P25042 368 aa8.23□□□□□ -1.09
BDF2YDL070W BNR1P40450 1375 aa8.23□□□□□ -1.09
BDF2YDL070W URN1Q06525 465 aaKnown RBP8.22□□□□□ -1.09
BDF2YDL070W TAF5P38129 798 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 78.7 ms