RNA–Protein interactions for RNA: YCR077C

PAT1, Transcript of Deadenylation-dependent mRNA-decapping factor, yeastyeast

Gene PAT1, Length 2,391 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAT1YCR077C TY1B-ML2Q03434 1755 aaKnown RBP7.92□□□□□ -1.14
PAT1YCR077C TY1B-ER1Q03612 1755 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-ML1Q04711 1755 aaKnown RBP7.92□□□□□ -1.14
PAT1YCR077C TY1B-GR2Q12269 1755 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-OLQ12273 1755 aa7.92□□□□□ -1.14
PAT1YCR077C TY1B-PLQ12414 1755 aaKnown RBP7.92□□□□□ -1.14
PAT1YCR077C TY1B-BRQ12193 1756 aa7.91□□□□□ -1.14
PAT1YCR077C TY1B-GR3Q12316 1755 aa7.91□□□□□ -1.14
PAT1YCR077C TY1B-ORQ92393 1755 aa7.91□□□□□ -1.14
PAT1YCR077C RTT106P40161 455 aa7.91□□□□□ -1.14
PAT1YCR077C TY3B-GQ99315 1547 aa7.9□□□□□ -1.14
PAT1YCR077C CDC25P04821 1589 aa7.89□□□□□ -1.15
PAT1YCR077C RPS0BP46654 252 aaKnown RBP7.89□□□□□ -1.15
PAT1YCR077C PRS1P32895 427 aaKnown RBP7.88□□□□□ -1.15
PAT1YCR077C DNF1P32660 1571 aa7.85□□□□□ -1.15
PAT1YCR077C CWC22P53333 577 aaKnown RBP7.84□□□□□ -1.15
PAT1YCR077C VPS15P22219 1454 aa7.83□□□□□ -1.16
PAT1YCR077C ESC1Q03661 1658 aaKnown RBP7.83□□□□□ -1.16
PAT1YCR077C VTH1P40438 1549 aa7.83□□□□□ -1.16
PAT1YCR077C VTH2P40890 1549 aa7.83□□□□□ -1.16
PAT1YCR077C DIP2Q12220 943 aaPredicted RBP7.82□□□□□ -1.16
PAT1YCR077C KRI1P42846 591 aaKnown RBP7.82□□□□□ -1.16
PAT1YCR077C TY1B-JR2P47100 1755 aaKnown RBP7.81□□□□□ -1.16
PAT1YCR077C TY1B-ER2Q03619 1755 aa7.81□□□□□ -1.16
PAT1YCR077C TY1B-MR1Q04214 1755 aa7.81□□□□□ -1.16
PAT1YCR077C TY1B-MR2Q04670 1755 aaKnown RBP7.81□□□□□ -1.16
PAT1YCR077C TY1B-LR1Q12088 1755 aaKnown RBP7.81□□□□□ -1.16
PAT1YCR077C TY1B-NL1Q12112 1755 aa7.81□□□□□ -1.16
PAT1YCR077C TY1B-GR1Q12141 1755 aa7.81□□□□□ -1.16
PAT1YCR077C TY1B-BLQ12490 1755 aa7.81□□□□□ -1.16
PAT1YCR077C YBT1P32386 1661 aa7.8□□□□□ -1.16
PAT1YCR077C SRB8P25648 1427 aa7.79□□□□□ -1.16
PAT1YCR077C YLR419WQ06698 1435 aaKnown RBP7.79□□□□□ -1.16
PAT1YCR077C NUP159P40477 1460 aa7.78□□□□□ -1.16
PAT1YCR077C SNT2P53127 1403 aa7.77□□□□□ -1.17
PAT1YCR077C RPA190P10964 1664 aaKnown RBP7.75□□□□□ -1.17
PAT1YCR077C GCN2P15442 1659 aa7.73□□□□□ -1.17
PAT1YCR077C YRB30P53107 440 aaPredicted RBP7.71□□□□□ -1.18
PAT1YCR077C IRC20Q06554 1556 aa7.71□□□□□ -1.18
PAT1YCR077C NTE1Q04958 1679 aa7.7□□□□□ -1.18
PAT1YCR077C PSD2P53037 1138 aaKnown RBP7.7□□□□□ -1.18
PAT1YCR077C PDR5P33302 1511 aaKnown RBP7.7□□□□□ -1.18
PAT1YCR077C MHP1P43638 1398 aa7.7□□□□□ -1.18
PAT1YCR077C CAT8P39113 1433 aa7.69□□□□□ -1.18
PAT1YCR077C RPO21P04050 1733 aaKnown RBP7.67□□□□□ -1.18
PAT1YCR077C LEU3P08638 886 aa7.67□□□□□ -1.18
PAT1YCR077C GDB1Q06625 1536 aa7.66□□□□□ -1.18
PAT1YCR077C CFT1Q06632 1357 aaKnown RBP7.66□□□□□ -1.18
PAT1YCR077C MET5P47169 1442 aa7.65□□□□□ -1.18
PAT1YCR077C TCB2P48231 1178 aa7.64□□□□□ -1.19
PAT1YCR077C GEA2P39993 1459 aaKnown RBP7.63□□□□□ -1.19
PAT1YCR077C ENV11P53246 860 aa7.63□□□□□ -1.19
PAT1YCR077C LEO1P38439 464 aa7.62□□□□□ -1.19
PAT1YCR077C AIM44Q99299 758 aa7.62□□□□□ -1.19
PAT1YCR077C YRF1-1P0CX20 1796 aa7.62□□□□□ -1.19
PAT1YCR077C YRF1-5P0CX21 1796 aa7.62□□□□□ -1.19
PAT1YCR077C YRF1-8P0CX22 1796 aa7.62□□□□□ -1.19
PAT1YCR077C BUD3P25558 1636 aa7.62□□□□□ -1.19
PAT1YCR077C IME2P32581 645 aa7.61□□□□□ -1.19
PAT1YCR077C CKB1P43639 278 aa7.61□□□□□ -1.19
PAT1YCR077C ARO1P08566 1588 aaKnown RBP7.61□□□□□ -1.19
PAT1YCR077C TY3B-IQ7LHG5 1498 aaKnown RBP7.59□□□□□ -1.19
PAT1YCR077C DEF1P35732 738 aaKnown RBP7.58□□□□□ -1.2
PAT1YCR077C NOP7P53261 605 aaKnown RBP7.58□□□□□ -1.2
PAT1YCR077C SPO14P36126 1683 aa7.58□□□□□ -1.2
PAT1YCR077C MNN4P36044 1178 aa7.57□□□□□ -1.2
PAT1YCR077C OPY1P38271 328 aa7.57□□□□□ -1.2
PAT1YCR077C DMA1P38823 416 aa7.57□□□□□ -1.2
PAT1YCR077C IOC4Q04213 475 aa7.57□□□□□ -1.2
PAT1YCR077C PDR12Q02785 1511 aa7.56□□□□□ -1.2
PAT1YCR077C NAP1P25293 417 aaKnown RBP7.56□□□□□ -1.2
PAT1YCR077C PSH1Q12161 406 aa7.56□□□□□ -1.2
PAT1YCR077C CLC1P17891 233 aa7.55□□□□□ -1.2
PAT1YCR077C RPC31P17890 251 aa7.54□□□□□ -1.2
PAT1YCR077C MET10P39692 1035 aa7.53□□□□□ -1.2
PAT1YCR077C NUP157P40064 1391 aaKnown RBP7.53□□□□□ -1.2
PAT1YCR077C ORC1P54784 914 aaPredicted RBP7.52□□□□□ -1.21
PAT1YCR077C PDS5Q04264 1277 aa7.52□□□□□ -1.21
PAT1YCR077C LTE1P07866 1435 aa7.51□□□□□ -1.21
PAT1YCR077C NUG1P40010 520 aaKnown RBP7.51□□□□□ -1.21
PAT1YCR077C IQG1Q12280 1495 aa7.51□□□□□ -1.21
PAT1YCR077C NST1P53935 1240 aa7.51□□□□□ -1.21
PAT1YCR077C ITT1Q04638 464 aa7.5□□□□□ -1.21
PAT1YCR077C SPT21P35209 758 aa7.49□□□□□ -1.21
PAT1YCR077C MMS1Q06211 1407 aa7.49□□□□□ -1.21
PAT1YCR077C YOR093CQ12275 1648 aa7.49□□□□□ -1.21
PAT1YCR077C FUN12P39730 1002 aaKnown RBP7.48□□□□□ -1.21
PAT1YCR077C BUD21Q08492 214 aaPredicted RBP7.48□□□□□ -1.21
PAT1YCR077C YSP2Q06681 1438 aa7.46□□□□□ -1.21
PAT1YCR077C RPP0P05317 312 aaKnown RBP7.46□□□□□ -1.21
PAT1YCR077C FPR3P38911 411 aaKnown RBP7.46□□□□□ -1.22
PAT1YCR077C CDC45Q08032 650 aa7.46□□□□□ -1.22
PAT1YCR077C NOP53Q12080 455 aaKnown RBP7.46□□□□□ -1.22
PAT1YCR077C PAF1P38351 445 aa7.45□□□□□ -1.22
PAT1YCR077C YIR014WP40570 242 aa7.45□□□□□ -1.22
PAT1YCR077C YGR130CP53278 816 aa7.45□□□□□ -1.22
PAT1YCR077C BNI1P41832 1953 aa7.45□□□□□ -1.22
PAT1YCR077C VPS27P40343 622 aaKnown RBP7.44□□□□□ -1.22
PAT1YCR077C EAF7P53911 425 aaKnown RBP7.44□□□□□ -1.22
PAT1YCR077C RVB2Q12464 471 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 84.8 ms