RNA–Protein interactions for RNA: ENST00000640523.1

KCNMA1-283, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-283ENST00000640523 NOP58Q9Y2X3 529 aaKnown RBP30.37■■■□□ 2.45
KCNMA1-283ENST00000640523 ZCCHC6Q5VYS8 1495 aaKnown RBP30.36■■■□□ 2.45
KCNMA1-283ENST00000640523 GOLGA6L22H0YM25 854 aa30.31■■■□□ 2.44
KCNMA1-283ENST00000640523 KDM2AQ9Y2K7 1162 aa30.28■■■□□ 2.44
KCNMA1-283ENST00000640523 RTN4Q9NQC3 1192 aaKnown RBP30.26■■■□□ 2.44
KCNMA1-283ENST00000640523 CEP162Q5TB80 1403 aa30.26■■■□□ 2.43
KCNMA1-283ENST00000640523 MTUS2Q5JR59 1369 aa30.26■■■□□ 2.43
KCNMA1-283ENST00000640523 TNNT2P45379 298 aaPredicted RBP30.25■■■□□ 2.43
KCNMA1-283ENST00000640523 MYH16Q9H6N6 1097 aa30.24■■■□□ 2.43
KCNMA1-283ENST00000640523 LAS1LQ9Y4W2 734 aaKnown RBP30.23■■■□□ 2.43
KCNMA1-283ENST00000640523 PLPPR3Q6T4P5 718 aa30.22■■■□□ 2.43
KCNMA1-283ENST00000640523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.22■■■□□ 2.43
KCNMA1-283ENST00000640523 NCLP19338 710 aaKnown RBP30.18■■■□□ 2.42
KCNMA1-283ENST00000640523 EEA1Q15075 1411 aa30.17■■■□□ 2.42
KCNMA1-283ENST00000640523 NAP1L5Q96NT1 182 aaPredicted RBP30.16■■■□□ 2.42
KCNMA1-283ENST00000640523 SCRIBQ14160 1630 aa30.14■■■□□ 2.42
KCNMA1-283ENST00000640523 TSPY4P0CV99 314 aa30.14■■■□□ 2.41
KCNMA1-283ENST00000640523 TSPY10P0CW01 314 aa30.14■■■□□ 2.41
KCNMA1-283ENST00000640523 DEKP35659 375 aaKnown RBP30.13■■■□□ 2.41
KCNMA1-283ENST00000640523 RBM19Q9Y4C8 960 aaKnown RBP30.13■■■□□ 2.41
KCNMA1-283ENST00000640523 GOLGA3Q08378 1498 aa30.11■■■□□ 2.41
KCNMA1-283ENST00000640523 RRP7BPQ9NSQ0 103 aa30.07■■■□□ 2.4
KCNMA1-283ENST00000640523 PTMAP06454 111 aaKnown RBP30.06■■■□□ 2.4
KCNMA1-283ENST00000640523 B4GALNT3Q6L9W6 998 aa30.05■■■□□ 2.4
KCNMA1-283ENST00000640523 NPM1P06748 294 aaKnown RBP eCLIP30.03■■■□□ 2.4
KCNMA1-283ENST00000640523 TNIKQ9UKE5 1360 aa30■■■□□ 2.39
KCNMA1-283ENST00000640523 SENP3-EIF4A1A0A087X0R7 540 aa29.99■■■□□ 2.39
KCNMA1-283ENST00000640523 DNTTIP2Q5QJE6 756 aaKnown RBP29.99■■■□□ 2.39
KCNMA1-283ENST00000640523 RGS3P49796 1198 aa29.94■■■□□ 2.38
KCNMA1-283ENST00000640523 CCER2I3L3R5 266 aa29.93■■■□□ 2.38
KCNMA1-283ENST00000640523 RSF1Q96T23 1441 aaPredicted RBP29.91■■■□□ 2.38
KCNMA1-283ENST00000640523 SIN3AQ96ST3 1273 aa29.89■■■□□ 2.38
KCNMA1-283ENST00000640523 KNSTRNQ9Y448 316 aa29.86■■■□□ 2.37
KCNMA1-283ENST00000640523 CDCA8Q53HL2 280 aa29.84■■■□□ 2.37
KCNMA1-283ENST00000640523 L1TD1Q5T7N2 865 aaKnown RBP29.83■■■□□ 2.37
KCNMA1-283ENST00000640523 FTSJ3Q8IY81 847 aaKnown RBP29.83■■■□□ 2.37
KCNMA1-283ENST00000640523 TSHZ2Q9NRE2 1034 aa29.82■■■□□ 2.36
KCNMA1-283ENST00000640523 CFAP53Q96M91 514 aa29.82■■■□□ 2.36
KCNMA1-283ENST00000640523 TIMELESSQ9UNS1 1208 aa29.82■■■□□ 2.36
KCNMA1-283ENST00000640523 CARD11Q9BXL7 1154 aa29.81■■■□□ 2.36
KCNMA1-283ENST00000640523 CASC1Q6TDU7 716 aa29.81■■■□□ 2.36
KCNMA1-283ENST00000640523 SENP3Q9H4L4 574 aaPredicted RBP29.76■■■□□ 2.36
KCNMA1-283ENST00000640523 CEP164Q9UPV0 1460 aa29.73■■■□□ 2.35
KCNMA1-283ENST00000640523 RGL3Q3MIN7 710 aa29.73■■■□□ 2.35
KCNMA1-283ENST00000640523 ZRSR1Q15695 479 aaKnown RBP29.72■■■□□ 2.35
KCNMA1-283ENST00000640523 HSP90AB1P08238 724 aaKnown RBP29.7■■■□□ 2.35
KCNMA1-283ENST00000640523 A0A0G2JS52 829 aa29.67■■■□□ 2.34
KCNMA1-283ENST00000640523 CDK11BP21127 795 aaKnown RBP29.67■■■□□ 2.34
KCNMA1-283ENST00000640523 ZBTB7CA1YPR0 619 aa29.66■■■□□ 2.34
KCNMA1-283ENST00000640523 FRAT1Q92837 279 aaPredicted RBP29.66■■■□□ 2.34
KCNMA1-283ENST00000640523 PLEKHG5O94827 1062 aa29.66■■■□□ 2.34
KCNMA1-283ENST00000640523 MS4A1P11836 297 aa29.64■■■□□ 2.34
KCNMA1-283ENST00000640523 WRNQ14191 1432 aaPredicted RBP eCLIP29.64■■■□□ 2.34
KCNMA1-283ENST00000640523 NEUROD2Q15784 382 aa29.63■■■□□ 2.33
KCNMA1-283ENST00000640523 CCNB3Q8WWL7 1395 aa29.62■■■□□ 2.33
KCNMA1-283ENST00000640523 MSNP26038 577 aaKnown RBP29.62■■■□□ 2.33
KCNMA1-283ENST00000640523 HSCBQ8IWL3 235 aa29.62■■■□□ 2.33
KCNMA1-283ENST00000640523 CHMP7Q8WUX9 453 aaPredicted RBP29.61■■■□□ 2.33
KCNMA1-283ENST00000640523 PLCB2Q00722 1185 aa29.61■■■□□ 2.33
KCNMA1-283ENST00000640523 CHMP4BQ9H444 224 aaKnown RBP29.61■■■□□ 2.33
KCNMA1-283ENST00000640523 C14orf37Q86TY3 774 aa29.59■■■□□ 2.33
KCNMA1-283ENST00000640523 TPRNQ4KMQ1 711 aa29.57■■■□□ 2.32
KCNMA1-283ENST00000640523 TCERG1O14776 1098 aaKnown RBP29.54■■■□□ 2.32
KCNMA1-283ENST00000640523 MAPK8IP3Q9UPT6 1336 aa29.54■■■□□ 2.32
KCNMA1-283ENST00000640523 PPP1R15AO75807 674 aaPredicted RBP29.54■■■□□ 2.32
KCNMA1-283ENST00000640523 CHAF1AQ13111 956 aaPredicted RBP29.52■■■□□ 2.32
KCNMA1-283ENST00000640523 KCNH8Q96L42 1107 aa29.52■■■□□ 2.32
KCNMA1-283ENST00000640523 NUDCQ9Y266 331 aa29.52■■■□□ 2.32
KCNMA1-283ENST00000640523 CC2D1BQ5T0F9 858 aaKnown RBP29.5■■■□□ 2.31
KCNMA1-283ENST00000640523 PNNQ9H307 717 aaKnown RBP29.49■■■□□ 2.31
KCNMA1-283ENST00000640523 IPO9Q96P70 1041 aaKnown RBP29.49■■■□□ 2.31
KCNMA1-283ENST00000640523 CFDP1Q9UEE9 299 aaPredicted RBP29.49■■■□□ 2.31
KCNMA1-283ENST00000640523 PLEKHD1A6NEE1 506 aa29.49■■■□□ 2.31
KCNMA1-283ENST00000640523 KIF27Q86VH2 1401 aa29.47■■■□□ 2.31
KCNMA1-283ENST00000640523 GOLGA6L6A8MZA4 724 aa29.46■■■□□ 2.31
KCNMA1-283ENST00000640523 NRDCO43847 1150 aa29.45■■■□□ 2.3
KCNMA1-283ENST00000640523 HSPA5P11021 654 aaKnown RBP29.42■■■□□ 2.3
KCNMA1-283ENST00000640523 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.42■■■□□ 2.3
KCNMA1-283ENST00000640523 SPRYD3Q8NCJ5 442 aa29.39■■■□□ 2.29
KCNMA1-283ENST00000640523 SETD5Q9C0A6 1442 aa29.38■■■□□ 2.29
KCNMA1-283ENST00000640523 RCAN3Q9UKA8 241 aa29.38■■■□□ 2.29
KCNMA1-283ENST00000640523 PTMSP20962 102 aa29.36■■■□□ 2.29
KCNMA1-283ENST00000640523 TMF1P82094 1093 aa29.36■■■□□ 2.29
KCNMA1-283ENST00000640523 ARID4BQ4LE39 1312 aaPredicted RBP29.35■■■□□ 2.29
KCNMA1-283ENST00000640523 GBP4Q96PP9 640 aa29.35■■■□□ 2.29
KCNMA1-283ENST00000640523 CFAP44Q96MT7 982 aa29.33■■■□□ 2.29
KCNMA1-283ENST00000640523 GOLGA6L4A6NEF3 574 aa29.31■■■□□ 2.28
KCNMA1-283ENST00000640523 SLKQ9H2G2 1235 aaPredicted RBP29.3■■■□□ 2.28
KCNMA1-283ENST00000640523 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
KCNMA1-283ENST00000640523 GZF1Q9H116 711 aaPredicted RBP29.28■■■□□ 2.28
KCNMA1-283ENST00000640523 USP35Q9P2H5 1018 aa29.28■■■□□ 2.28
KCNMA1-283ENST00000640523 VPS8Q8N3P4 1428 aa29.27■■■□□ 2.28
KCNMA1-283ENST00000640523 GOLGA6L3A6NEY3 463 aa29.26■■■□□ 2.28
KCNMA1-283ENST00000640523 RB1CC1Q8TDY2 1594 aa29.26■■■□□ 2.27
KCNMA1-283ENST00000640523 DCAF11Q8TEB1 546 aa29.25■■■□□ 2.27
KCNMA1-283ENST00000640523 U2SURPO15042 1029 aaKnown RBP29.25■■■□□ 2.27
KCNMA1-283ENST00000640523 MCCP23508 829 aa29.23■■■□□ 2.27
KCNMA1-283ENST00000640523 KTN1Q86UP2 1357 aaKnown RBP29.22■■■□□ 2.27
KCNMA1-283ENST00000640523 KIAA2012Q0VF49 1180 aa29.22■■■□□ 2.27
KCNMA1-283ENST00000640523 FGD1P98174 961 aa29.22■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms