RNA–Protein interactions for RNA: ENST00000626824.1

CA1-225, Transcript of carbonic anhydrase 1, humanhuman

TSL 5 BASIC

Gene CA1, Length 2,405 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CA1-225ENST00000626824 RNF39Q9H2S5 420 aa9.73□□□□□ -0.85
CA1-225ENST00000626824 CACNB1Q02641 598 aaPredicted RBP9.73□□□□□ -0.85
CA1-225ENST00000626824 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
CA1-225ENST00000626824 IGSF3O75054 1194 aa9.72□□□□□ -0.85
CA1-225ENST00000626824 NKX1-1Q15270 411 aaPredicted RBP9.72□□□□□ -0.85
CA1-225ENST00000626824 ZBTB7CA1YPR0 619 aa9.69□□□□□ -0.86
CA1-225ENST00000626824 ARID3CA6NKF2 412 aa9.69□□□□□ -0.86
CA1-225ENST00000626824 HS6ST3Q8IZP7 471 aa9.68□□□□□ -0.86
CA1-225ENST00000626824 ZNF219Q9P2Y4 722 aaPredicted RBP9.68□□□□□ -0.86
CA1-225ENST00000626824 SLC24A3Q9HC58 644 aa9.67□□□□□ -0.86
CA1-225ENST00000626824 GTPBP6O43824 516 aaPredicted RBP9.65□□□□□ -0.86
CA1-225ENST00000626824 PDIA4P13667 645 aaKnown RBP9.64□□□□□ -0.87
CA1-225ENST00000626824 ZC3H15Q8WU90 426 aaKnown RBP9.61□□□□□ -0.87
CA1-225ENST00000626824 C1QBPQ07021 282 aaKnown RBP9.6□□□□□ -0.87
CA1-225ENST00000626824 KCNV2Q8TDN2 545 aa9.59□□□□□ -0.87
CA1-225ENST00000626824 CIZ1Q9ULV3 898 aaPredicted RBP9.58□□□□□ -0.88
CA1-225ENST00000626824 SAMD1Q6SPF0 538 aaPredicted RBP9.58□□□□□ -0.88
CA1-225ENST00000626824 RNF25Q96BH1 459 aaPredicted RBP9.58□□□□□ -0.88
CA1-225ENST00000626824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.57□□□□□ -0.88
CA1-225ENST00000626824 APBB1O00213 710 aa9.56□□□□□ -0.88
CA1-225ENST00000626824 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
CA1-225ENST00000626824 KCTD17Q8N5Z5 321 aa9.53□□□□□ -0.88
CA1-225ENST00000626824 ZNF428Q96B54 188 aa9.52□□□□□ -0.89
CA1-225ENST00000626824 SHROOM4Q9ULL8 1493 aa9.52□□□□□ -0.89
CA1-225ENST00000626824 PLEKHG5O94827 1062 aa9.52□□□□□ -0.89
CA1-225ENST00000626824 GPBP1L1Q9HC44 474 aaPredicted RBP9.51□□□□□ -0.89
CA1-225ENST00000626824 RAD21O60216 631 aa9.49□□□□□ -0.89
CA1-225ENST00000626824 U3KPZ7 1027 aaPredicted RBP9.49□□□□□ -0.89
CA1-225ENST00000626824 IL27Q8NEV9 243 aa9.48□□□□□ -0.89
CA1-225ENST00000626824 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.48□□□□□ -0.89
CA1-225ENST00000626824 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
CA1-225ENST00000626824 PLCD3Q8N3E9 789 aa9.47□□□□□ -0.89
CA1-225ENST00000626824 MKRN3Q13064 507 aaKnown RBP9.46□□□□□ -0.89
CA1-225ENST00000626824 RGS22Q8NE09 1264 aa9.44□□□□□ -0.9
CA1-225ENST00000626824 CDK11BP21127 795 aaKnown RBP9.44□□□□□ -0.9
CA1-225ENST00000626824 CCDC82Q8N4S0 544 aa9.44□□□□□ -0.9
CA1-225ENST00000626824 CDK11AQ9UQ88 783 aaPredicted RBP9.44□□□□□ -0.9
CA1-225ENST00000626824 MTMR7Q9Y216 660 aa9.44□□□□□ -0.9
CA1-225ENST00000626824 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
CA1-225ENST00000626824 FOXD4L5Q5VV16 416 aaPredicted RBP9.41□□□□□ -0.9
CA1-225ENST00000626824 FOXD4L4Q8WXT5 416 aaPredicted RBP9.41□□□□□ -0.9
CA1-225ENST00000626824 CHMP4AQ9BY43 222 aa9.4□□□□□ -0.9
CA1-225ENST00000626824 CADPS2Q86UW7 1296 aa9.39□□□□□ -0.91
CA1-225ENST00000626824 ZMYND10O75800 440 aa9.37□□□□□ -0.91
CA1-225ENST00000626824 RBM25P49756 843 aaKnown RBP9.37□□□□□ -0.91
CA1-225ENST00000626824 AEBP1Q8IUX7 1158 aa9.37□□□□□ -0.91
CA1-225ENST00000626824 STK25O00506 426 aa9.36□□□□□ -0.91
CA1-225ENST00000626824 MIER1Q8N108 512 aa9.36□□□□□ -0.91
CA1-225ENST00000626824 SEMA3EO15041 775 aa9.35□□□□□ -0.91
CA1-225ENST00000626824 HSP90B1P14625 803 aaKnown RBP9.35□□□□□ -0.91
CA1-225ENST00000626824 POLA2Q14181 598 aa9.34□□□□□ -0.91
CA1-225ENST00000626824 KDM4CQ9H3R0 1056 aa9.31□□□□□ -0.92
CA1-225ENST00000626824 WDR70Q9NW82 654 aa9.31□□□□□ -0.92
CA1-225ENST00000626824 MFAP1P55081 439 aaKnown RBP9.28□□□□□ -0.92
CA1-225ENST00000626824 TMCO4Q5TGY1 634 aa9.28□□□□□ -0.92
CA1-225ENST00000626824 CLUAP1Q96AJ1 413 aa9.28□□□□□ -0.92
CA1-225ENST00000626824 HMGB1P09429 215 aaKnown RBP9.27□□□□□ -0.92
CA1-225ENST00000626824 RIOK3O14730 519 aaKnown RBP9.27□□□□□ -0.93
CA1-225ENST00000626824 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
CA1-225ENST00000626824 TRAIPQ9BWF2 469 aa9.26□□□□□ -0.93
CA1-225ENST00000626824 TESPA1A2RU30 521 aaPredicted RBP9.26□□□□□ -0.93
CA1-225ENST00000626824 STAG3Q9UJ98 1225 aa9.25□□□□□ -0.93
CA1-225ENST00000626824 GZF1Q9H116 711 aaPredicted RBP9.24□□□□□ -0.93
CA1-225ENST00000626824 BARGINQ6ZT62 677 aa9.23□□□□□ -0.93
CA1-225ENST00000626824 SPINK5Q9NQ38 1064 aaPredicted RBP9.22□□□□□ -0.93
CA1-225ENST00000626824 BCL11BQ9C0K0 894 aaPredicted RBP9.21□□□□□ -0.94
CA1-225ENST00000626824 TRAK2O60296 914 aa9.2□□□□□ -0.94
CA1-225ENST00000626824 CAPN15O75808 1086 aa9.2□□□□□ -0.94
CA1-225ENST00000626824 FAM117AQ9C073 453 aa9.2□□□□□ -0.94
CA1-225ENST00000626824 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
CA1-225ENST00000626824 STK24Q9Y6E0 443 aa9.2□□□□□ -0.94
CA1-225ENST00000626824 AK7Q96M32 723 aa9.19□□□□□ -0.94
CA1-225ENST00000626824 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
CA1-225ENST00000626824 DHX37Q8IY37 1157 aaKnown RBP9.17□□□□□ -0.94
CA1-225ENST00000626824 RETREG2Q8NC44 543 aa9.17□□□□□ -0.94
CA1-225ENST00000626824 USP35Q9P2H5 1018 aa9.17□□□□□ -0.94
CA1-225ENST00000626824 IRF5Q13568 498 aa9.16□□□□□ -0.94
CA1-225ENST00000626824 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.94
CA1-225ENST00000626824 PDE4DQ08499 809 aa9.14□□□□□ -0.95
CA1-225ENST00000626824 ZNF777Q9ULD5 760 aaPredicted RBP9.14□□□□□ -0.95
CA1-225ENST00000626824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.14□□□□□ -0.95
CA1-225ENST00000626824 E9PSI1 815 aa9.14□□□□□ -0.95
CA1-225ENST00000626824 DSG3P32926 999 aa9.14□□□□□ -0.95
CA1-225ENST00000626824 FLIIQ13045 1269 aa9.14□□□□□ -0.95
CA1-225ENST00000626824 ZFP91Q96JP5 570 aaPredicted RBP9.14□□□□□ -0.95
CA1-225ENST00000626824 PLEKHG3A1L390 1219 aa9.13□□□□□ -0.95
CA1-225ENST00000626824 VGFO15240 615 aaPredicted RBP9.13□□□□□ -0.95
CA1-225ENST00000626824 RYDENQ9NUL5 291 aaKnown RBP9.13□□□□□ -0.95
CA1-225ENST00000626824 TRIM66O15016 1216 aa9.11□□□□□ -0.95
CA1-225ENST00000626824 A6NJR5 290 aa9.11□□□□□ -0.95
CA1-225ENST00000626824 KRI1Q8N9T8 703 aaKnown RBP9.1□□□□□ -0.95
CA1-225ENST00000626824 E2F4Q16254 413 aa9.09□□□□□ -0.96
CA1-225ENST00000626824 FBXW7Q969H0 707 aa9.09□□□□□ -0.96
CA1-225ENST00000626824 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
CA1-225ENST00000626824 RBM26Q5T8P6 1007 aaKnown RBP9.07□□□□□ -0.96
CA1-225ENST00000626824 FAM177A1Q8N128 213 aaPredicted RBP9.07□□□□□ -0.96
CA1-225ENST00000626824 GSE1Q14687 1217 aa9.06□□□□□ -0.96
CA1-225ENST00000626824 ZNF692Q9BU19 519 aaPredicted RBP9.03□□□□□ -0.96
CA1-225ENST00000626824 POM121Q96HA1 1249 aa9.02□□□□□ -0.97
CA1-225ENST00000626824 NUBP1P53384 320 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms