RNA–Protein interactions for RNA: ENST00000626103.1

COMMD6-213, Transcript of COMM domain containing 6, humanhuman

TSL 5 BASIC

Gene COMMD6, Length 120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-213ENST00000626103 LTBP4Q8N2S1 1624 aa3.89□□□□□ -1.79
COMMD6-213ENST00000626103 HSPA2P54652 639 aa3.89□□□□□ -1.79
COMMD6-213ENST00000626103 NPM2Q86SE8 214 aaKnown RBP3.89□□□□□ -1.79
COMMD6-213ENST00000626103 HMGXB3Q12766 1538 aa3.89□□□□□ -1.79
COMMD6-213ENST00000626103 TSPOAP1O95153 1857 aa3.88□□□□□ -1.79
COMMD6-213ENST00000626103 ATAD2BQ9ULI0 1458 aa3.88□□□□□ -1.79
COMMD6-213ENST00000626103 CEP164Q9UPV0 1460 aa3.88□□□□□ -1.79
COMMD6-213ENST00000626103 DIP2BQ9P265 1576 aa3.88□□□□□ -1.79
COMMD6-213ENST00000626103 PTPRMP28827 1452 aa3.86□□□□□ -1.79
COMMD6-213ENST00000626103 SMARCA4P51532 1647 aa3.86□□□□□ -1.79
COMMD6-213ENST00000626103 C14orf37Q86TY3 774 aa3.86□□□□□ -1.79
COMMD6-213ENST00000626103 SLC4A1APQ9BWU0 796 aaKnown RBP3.85□□□□□ -1.79
COMMD6-213ENST00000626103 RGS17Q9UGC6 210 aaPredicted RBP3.85□□□□□ -1.79
COMMD6-213ENST00000626103 CADPSQ9ULU8 1353 aa3.85□□□□□ -1.79
COMMD6-213ENST00000626103 IQSEC2Q5JU85 1478 aa3.85□□□□□ -1.79
COMMD6-213ENST00000626103 EIF4G3O43432 1585 aaKnown RBP3.85□□□□□ -1.79
COMMD6-213ENST00000626103 SENP3-EIF4A1A0A087X0R7 540 aa3.84□□□□□ -1.79
COMMD6-213ENST00000626103 RBM33Q96EV2 1170 aaKnown RBP3.84□□□□□ -1.79
COMMD6-213ENST00000626103 IFT140Q96RY7 1462 aa3.84□□□□□ -1.8
COMMD6-213ENST00000626103 UBAP1LF5GYI3 381 aa3.83□□□□□ -1.8
COMMD6-213ENST00000626103 HSPA1LP34931 641 aa3.83□□□□□ -1.8
COMMD6-213ENST00000626103 PLCB2Q00722 1185 aa3.83□□□□□ -1.8
COMMD6-213ENST00000626103 UPF1Q92900 1129 aaKnown RBP eCLIP3.83□□□□□ -1.8
COMMD6-213ENST00000626103 URB2Q14146 1524 aaKnown RBP3.83□□□□□ -1.8
COMMD6-213ENST00000626103 SYNJ1O43426 1573 aa3.83□□□□□ -1.8
COMMD6-213ENST00000626103 SETD1AO15047 1707 aaKnown RBP3.83□□□□□ -1.8
COMMD6-213ENST00000626103 PTPRTO14522 1441 aa3.82□□□□□ -1.8
COMMD6-213ENST00000626103 FBXO3Q9UK99 471 aa3.82□□□□□ -1.8
COMMD6-213ENST00000626103 COL17A1Q9UMD9 1497 aaPredicted RBP3.81□□□□□ -1.8
COMMD6-213ENST00000626103 MAPKBP1O60336 1514 aa3.8□□□□□ -1.8
COMMD6-213ENST00000626103 FANCD2Q9BXW9 1451 aa3.8□□□□□ -1.8
COMMD6-213ENST00000626103 BCL11AQ9H165 835 aa3.8□□□□□ -1.8
COMMD6-213ENST00000626103 BAZ1BQ9UIG0 1483 aaKnown RBP3.79□□□□□ -1.8
COMMD6-213ENST00000626103 POTEAQ6S8J7 498 aa3.79□□□□□ -1.8
COMMD6-213ENST00000626103 DMRT2Q9Y5R5 561 aa3.79□□□□□ -1.8
COMMD6-213ENST00000626103 AQRO60306 1485 aaKnown RBP eCLIP3.79□□□□□ -1.8
COMMD6-213ENST00000626103 YY1P25490 414 aa3.78□□□□□ -1.8
COMMD6-213ENST00000626103 PLEKHG5O94827 1062 aa3.77□□□□□ -1.81
COMMD6-213ENST00000626103 NPM1P06748 294 aaKnown RBP eCLIP3.77□□□□□ -1.81
COMMD6-213ENST00000626103 TMEM132AQ24JP5 1023 aa3.77□□□□□ -1.81
COMMD6-213ENST00000626103 ADAMTSL3P82987 1691 aa3.77□□□□□ -1.81
COMMD6-213ENST00000626103 PPRC1Q5VV67 1664 aaKnown RBP3.77□□□□□ -1.81
COMMD6-213ENST00000626103 KIF21BO75037 1637 aa3.77□□□□□ -1.81
COMMD6-213ENST00000626103 SCAF1Q9H7N4 1312 aaKnown RBP3.76□□□□□ -1.81
COMMD6-213ENST00000626103 CHMP7Q8WUX9 453 aaPredicted RBP3.76□□□□□ -1.81
COMMD6-213ENST00000626103 YEATS2Q9ULM3 1422 aa3.76□□□□□ -1.81
COMMD6-213ENST00000626103 SETBP1Q9Y6X0 1596 aa3.75□□□□□ -1.81
COMMD6-213ENST00000626103 CAPN15O75808 1086 aa3.74□□□□□ -1.81
COMMD6-213ENST00000626103 CDK11BP21127 795 aaKnown RBP3.74□□□□□ -1.81
COMMD6-213ENST00000626103 PIP4K2BP78356 416 aa3.74□□□□□ -1.81
COMMD6-213ENST00000626103 CDK11AQ9UQ88 783 aaPredicted RBP3.74□□□□□ -1.81
COMMD6-213ENST00000626103 STRCQ7RTU9 1775 aa3.74□□□□□ -1.81
COMMD6-213ENST00000626103 SUPT5HO00267 1087 aaKnown RBP3.73□□□□□ -1.81
COMMD6-213ENST00000626103 VSIG10Q8N0Z9 540 aa3.73□□□□□ -1.81
COMMD6-213ENST00000626103 NEFLP07196 543 aa3.72□□□□□ -1.81
COMMD6-213ENST00000626103 PDIA4P13667 645 aaKnown RBP3.72□□□□□ -1.81
COMMD6-213ENST00000626103 ZRANB1Q9UGI0 708 aa3.72□□□□□ -1.81
COMMD6-213ENST00000626103 MADDQ8WXG6 1647 aa3.72□□□□□ -1.81
COMMD6-213ENST00000626103 HMGB1P09429 215 aaKnown RBP3.71□□□□□ -1.82
COMMD6-213ENST00000626103 TRIM26Q12899 539 aaPredicted RBP3.71□□□□□ -1.82
COMMD6-213ENST00000626103 CFAP43Q8NDM7 1665 aa3.71□□□□□ -1.82
COMMD6-213ENST00000626103 C1QTNF8P60827 252 aa3.7□□□□□ -1.82
COMMD6-213ENST00000626103 CEP170Q5SW79 1584 aa3.7□□□□□ -1.82
COMMD6-213ENST00000626103 FOXD1Q16676 465 aa3.69□□□□□ -1.82
COMMD6-213ENST00000626103 RIMS1Q86UR5 1692 aaKnown RBP3.68□□□□□ -1.82
COMMD6-213ENST00000626103 PRELPP51888 382 aa3.68□□□□□ -1.82
COMMD6-213ENST00000626103 BCORL1Q5H9F3 1711 aa3.67□□□□□ -1.82
COMMD6-213ENST00000626103 TOM1O60784 492 aa3.67□□□□□ -1.82
COMMD6-213ENST00000626103 SENP3Q9H4L4 574 aaPredicted RBP3.67□□□□□ -1.82
COMMD6-213ENST00000626103 TEX14Q8IWB6 1497 aa3.67□□□□□ -1.82
COMMD6-213ENST00000626103 LRP5O75197 1615 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 ADCY10Q96PN6 1610 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 PDE4CQ08493 712 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 FKBP8Q14318 412 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 FAM9AQ8IZU1 332 aaPredicted RBP3.66□□□□□ -1.82
COMMD6-213ENST00000626103 UBE2Q2Q8WVN8 375 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 TRIM52Q96A61 297 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 POLR3GLQ9BT43 218 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 PPP6R1Q9UPN7 881 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 GLI2P10070 1586 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 MAGI1Q96QZ7 1491 aaPredicted RBP3.66□□□□□ -1.82
COMMD6-213ENST00000626103 TARBP1Q13395 1621 aaKnown RBP3.66□□□□□ -1.82
COMMD6-213ENST00000626103 CEP350Q5VT06 3117 aa3.66□□□□□ -1.82
COMMD6-213ENST00000626103 CHMP4AQ9BY43 222 aa3.65□□□□□ -1.83
COMMD6-213ENST00000626103 ZNF335Q9H4Z2 1342 aaPredicted RBP3.65□□□□□ -1.83
COMMD6-213ENST00000626103 UBTFP17480 764 aaKnown RBP3.64□□□□□ -1.83
COMMD6-213ENST00000626103 BRD2P25440 801 aaKnown RBP3.64□□□□□ -1.83
COMMD6-213ENST00000626103 NBR1Q14596 966 aa3.64□□□□□ -1.83
COMMD6-213ENST00000626103 TAF7LQ5H9L4 462 aa3.64□□□□□ -1.83
COMMD6-213ENST00000626103 TOPBP1Q92547 1522 aa3.64□□□□□ -1.83
COMMD6-213ENST00000626103 DCAF1Q9Y4B6 1507 aa3.64□□□□□ -1.83
COMMD6-213ENST00000626103 TDRD9Q8NDG6 1382 aaKnown RBP3.63□□□□□ -1.83
COMMD6-213ENST00000626103 PREX1Q8TCU6 1659 aa3.63□□□□□ -1.83
COMMD6-213ENST00000626103 CFTRP13569 1480 aa3.63□□□□□ -1.83
COMMD6-213ENST00000626103 LOC105371045A0A1W2PR82 267 aa3.63□□□□□ -1.83
COMMD6-213ENST00000626103 HSP90B1P14625 803 aaKnown RBP3.63□□□□□ -1.83
COMMD6-213ENST00000626103 ZNF784Q8NCA9 323 aaPredicted RBP3.63□□□□□ -1.83
COMMD6-213ENST00000626103 CCDC9Q9Y3X0 531 aaKnown RBP3.63□□□□□ -1.83
COMMD6-213ENST00000626103 ARID4BQ4LE39 1312 aaPredicted RBP3.63□□□□□ -1.83
COMMD6-213ENST00000626103 SHROOM2Q13796 1616 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms