RNA–Protein interactions for RNA: ENST00000618548.4

PCSK6-217, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 4,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-217ENST00000618548 B4GALNT3Q6L9W6 998 aa27.89■■■□□ 2.05
PCSK6-217ENST00000618548 SALL2Q9Y467 1007 aaPredicted RBP27.88■■■□□ 2.05
PCSK6-217ENST00000618548 RUSC2Q8N2Y8 1516 aa27.88■■■□□ 2.05
PCSK6-217ENST00000618548 PPP4R2Q9NY27 417 aa27.87■■■□□ 2.05
PCSK6-217ENST00000618548 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
PCSK6-217ENST00000618548 CCER2I3L3R5 266 aa27.84■■■□□ 2.05
PCSK6-217ENST00000618548 EIF4G2P78344 907 aaKnown RBP eCLIP27.82■■■□□ 2.04
PCSK6-217ENST00000618548 DEKP35659 375 aaKnown RBP27.82■■■□□ 2.04
PCSK6-217ENST00000618548 NACADO15069 1562 aa27.76■■■□□ 2.03
PCSK6-217ENST00000618548 NOP58Q9Y2X3 529 aaKnown RBP27.75■■■□□ 2.03
PCSK6-217ENST00000618548 TMC1Q8TDI8 760 aa27.74■■■□□ 2.03
PCSK6-217ENST00000618548 RAB3GAP2Q9H2M9 1393 aa27.71■■■□□ 2.03
PCSK6-217ENST00000618548 RRP7BPQ9NSQ0 103 aa27.7■■■□□ 2.03
PCSK6-217ENST00000618548 RTN4Q9NQC3 1192 aaKnown RBP27.69■■■□□ 2.02
PCSK6-217ENST00000618548 MTUS2Q5JR59 1369 aa27.65■■■□□ 2.02
PCSK6-217ENST00000618548 TIMELESSQ9UNS1 1208 aa27.63■■■□□ 2.01
PCSK6-217ENST00000618548 SETD5Q9C0A6 1442 aa27.62■■■□□ 2.01
PCSK6-217ENST00000618548 PPP1R15AO75807 674 aaPredicted RBP27.58■■■□□ 2.01
PCSK6-217ENST00000618548 RAPGEF2Q9Y4G8 1499 aa27.56■■■□□ 2
PCSK6-217ENST00000618548 KIF27Q86VH2 1401 aa27.56■■■□□ 2
PCSK6-217ENST00000618548 LAS1LQ9Y4W2 734 aaKnown RBP27.56■■■□□ 2
PCSK6-217ENST00000618548 ZNF777Q9ULD5 760 aaPredicted RBP27.52■■■□□ 2
PCSK6-217ENST00000618548 SLC4A1APQ9BWU0 796 aaKnown RBP27.5■■□□□ 1.99
PCSK6-217ENST00000618548 NEFMP07197 916 aa27.47■■□□□ 1.99
PCSK6-217ENST00000618548 TOP2AP11388 1531 aaKnown RBP27.46■■□□□ 1.99
PCSK6-217ENST00000618548 HSPA5P11021 654 aaKnown RBP27.44■■□□□ 1.98
PCSK6-217ENST00000618548 BAZ1BQ9UIG0 1483 aaKnown RBP27.42■■□□□ 1.98
PCSK6-217ENST00000618548 ERICH6BQ5W0A0 696 aa27.42■■□□□ 1.98
PCSK6-217ENST00000618548 CANXP27824 592 aaKnown RBP27.41■■□□□ 1.98
PCSK6-217ENST00000618548 KDM2AQ9Y2K7 1162 aa27.38■■□□□ 1.97
PCSK6-217ENST00000618548 FANCIQ9NVI1 1328 aa27.38■■□□□ 1.97
PCSK6-217ENST00000618548 ARXQ96QS3 562 aa27.36■■□□□ 1.97
PCSK6-217ENST00000618548 PPM1GO15355 546 aaPredicted RBP27.31■■□□□ 1.96
PCSK6-217ENST00000618548 DDRGK1Q96HY6 314 aa27.26■■□□□ 1.95
PCSK6-217ENST00000618548 IPO9Q96P70 1041 aaKnown RBP27.22■■□□□ 1.95
PCSK6-217ENST00000618548 FHAD1B1AJZ9 1412 aa27.21■■□□□ 1.95
PCSK6-217ENST00000618548 FOXD1Q16676 465 aa27.2■■□□□ 1.94
PCSK6-217ENST00000618548 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
PCSK6-217ENST00000618548 KIF21BO75037 1637 aa27.15■■□□□ 1.94
PCSK6-217ENST00000618548 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.15■■□□□ 1.94
PCSK6-217ENST00000618548 SMARCA2P51531 1590 aa27.13■■□□□ 1.93
PCSK6-217ENST00000618548 FBLN2P98095 1184 aa27.13■■□□□ 1.93
PCSK6-217ENST00000618548 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.13■■□□□ 1.93
PCSK6-217ENST00000618548 CUX2O14529 1486 aa27.12■■□□□ 1.93
PCSK6-217ENST00000618548 ARHGAP35Q9NRY4 1499 aa27.12■■□□□ 1.93
PCSK6-217ENST00000618548 MSH5O43196 834 aa27.11■■□□□ 1.93
PCSK6-217ENST00000618548 UPF2Q9HAU5 1272 aaKnown RBP27.11■■□□□ 1.93
PCSK6-217ENST00000618548 CARD11Q9BXL7 1154 aa27.08■■□□□ 1.93
PCSK6-217ENST00000618548 WDR43Q15061 677 aaKnown RBP eCLIP27.08■■□□□ 1.93
PCSK6-217ENST00000618548 L3MBTL2Q969R5 705 aa27.06■■□□□ 1.92
PCSK6-217ENST00000618548 NUDCQ9Y266 331 aa27.05■■□□□ 1.92
PCSK6-217ENST00000618548 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
PCSK6-217ENST00000618548 RGS3P49796 1198 aa27.05■■□□□ 1.92
PCSK6-217ENST00000618548 PRKRIP1Q9H875 184 aaPredicted RBP27.05■■□□□ 1.92
PCSK6-217ENST00000618548 GLIPR1L2Q4G1C9 344 aa27.04■■□□□ 1.92
PCSK6-217ENST00000618548 MPHOSPH9Q99550 1183 aa26.98■■□□□ 1.91
PCSK6-217ENST00000618548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.97■■□□□ 1.911e-6■□□□□ 11
PCSK6-217ENST00000618548 RGL3Q3MIN7 710 aa26.96■■□□□ 1.91
PCSK6-217ENST00000618548 ZBED9Q6R2W3 1325 aa26.96■■□□□ 1.91
PCSK6-217ENST00000618548 TCERG1O14776 1098 aaKnown RBP26.96■■□□□ 1.91
PCSK6-217ENST00000618548 RCAN3Q9UKA8 241 aa26.94■■□□□ 1.9
PCSK6-217ENST00000618548 RRBP1Q9P2E9 1410 aaKnown RBP26.93■■□□□ 1.9
PCSK6-217ENST00000618548 PAK3O75914 559 aaPredicted RBP26.92■■□□□ 1.9
PCSK6-217ENST00000618548 TSPY4P0CV99 314 aa26.92■■□□□ 1.9
PCSK6-217ENST00000618548 TSPY10P0CW01 314 aa26.92■■□□□ 1.9
PCSK6-217ENST00000618548 HSP90AA1P07900 732 aaKnown RBP26.91■■□□□ 1.9
PCSK6-217ENST00000618548 BECN1Q14457 450 aa26.9■■□□□ 1.9
PCSK6-217ENST00000618548 CC2D1BQ5T0F9 858 aaKnown RBP26.88■■□□□ 1.89
PCSK6-217ENST00000618548 ARAP1Q96P48 1450 aa26.88■■□□□ 1.89
PCSK6-217ENST00000618548 PHLDB1Q86UU1 1377 aa26.88■■□□□ 1.89
PCSK6-217ENST00000618548 FMN1Q68DA7 1419 aa26.87■■□□□ 1.89
PCSK6-217ENST00000618548 FHOD3Q2V2M9 1422 aa26.86■■□□□ 1.89
PCSK6-217ENST00000618548 WASHC2AQ641Q2 1341 aa26.83■■□□□ 1.89
PCSK6-217ENST00000618548 PDE4AP27815 886 aa26.82■■□□□ 1.88
PCSK6-217ENST00000618548 CFDP1Q9UEE9 299 aaPredicted RBP26.82■■□□□ 1.88
PCSK6-217ENST00000618548 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
PCSK6-217ENST00000618548 ANP32BQ92688 251 aaKnown RBP26.81■■□□□ 1.88
PCSK6-217ENST00000618548 EXOC6Q8TAG9 804 aa26.79■■□□□ 1.88
PCSK6-217ENST00000618548 ANO8Q9HCE9 1232 aaPredicted RBP26.79■■□□□ 1.88
PCSK6-217ENST00000618548 CCDC184Q52MB2 194 aa26.78■■□□□ 1.88
PCSK6-217ENST00000618548 SYNJ1O43426 1573 aa26.78■■□□□ 1.88
PCSK6-217ENST00000618548 SLC4A3P48751 1232 aa26.77■■□□□ 1.88
PCSK6-217ENST00000618548 DCAF11Q8TEB1 546 aa26.77■■□□□ 1.88
PCSK6-217ENST00000618548 CCDC18Q5T9S5 1454 aa26.77■■□□□ 1.88
PCSK6-217ENST00000618548 NAP1L5Q96NT1 182 aaPredicted RBP26.75■■□□□ 1.87
PCSK6-217ENST00000618548 USP35Q9P2H5 1018 aa26.75■■□□□ 1.87
PCSK6-217ENST00000618548 ATAD2BQ9ULI0 1458 aa26.73■■□□□ 1.87
PCSK6-217ENST00000618548 KNSTRNQ9Y448 316 aa26.71■■□□□ 1.87
PCSK6-217ENST00000618548 IL27Q8NEV9 243 aa26.71■■□□□ 1.87
PCSK6-217ENST00000618548 PKD2Q13563 968 aa26.7■■□□□ 1.87
PCSK6-217ENST00000618548 PLIN1O60240 522 aa26.68■■□□□ 1.86
PCSK6-217ENST00000618548 TRIM44Q96DX7 344 aaPredicted RBP26.66■■□□□ 1.86
PCSK6-217ENST00000618548 RRP1P56182 461 aaKnown RBP26.66■■□□□ 1.86
PCSK6-217ENST00000618548 LRRC9Q6ZRR7 1453 aa26.66■■□□□ 1.86
PCSK6-217ENST00000618548 GSE1Q14687 1217 aa26.65■■□□□ 1.86
PCSK6-217ENST00000618548 CCDC7Q96M83 1385 aa26.65■■□□□ 1.86
PCSK6-217ENST00000618548 NEUROD2Q15784 382 aa26.65■■□□□ 1.86
PCSK6-217ENST00000618548 RALBP1Q15311 655 aa26.64■■□□□ 1.85
PCSK6-217ENST00000618548 FRAT1Q92837 279 aaPredicted RBP26.64■■□□□ 1.85
PCSK6-217ENST00000618548 SLKQ9H2G2 1235 aaPredicted RBP26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms