RNA–Protein interactions for RNA: ENST00000611640.4

KDM4B-211, Transcript of lysine demethylase 4B, humanhuman

TSL 5 BASIC

Gene KDM4B, Length 5,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-211ENST00000611640 ESF1Q9H501 851 aaKnown RBP22.11■■□□□ 1.13
KDM4B-211ENST00000611640 RRP7BPQ9NSQ0 103 aa22.09■■□□□ 1.13
KDM4B-211ENST00000611640 TNIKQ9UKE5 1360 aa22.03■■□□□ 1.12
KDM4B-211ENST00000611640 WRNQ14191 1432 aaPredicted RBP eCLIP22.01■■□□□ 1.113e-6■■■■■ 52.2
KDM4B-211ENST00000611640 NPM1P06748 294 aaKnown RBP eCLIP22■■□□□ 1.11
KDM4B-211ENST00000611640 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
KDM4B-211ENST00000611640 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
KDM4B-211ENST00000611640 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
KDM4B-211ENST00000611640 ARXQ96QS3 562 aa21.93■■□□□ 1.1
KDM4B-211ENST00000611640 DDRGK1Q96HY6 314 aa21.89■■□□□ 1.09
KDM4B-211ENST00000611640 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
KDM4B-211ENST00000611640 KIF27Q86VH2 1401 aa21.86■■□□□ 1.09
KDM4B-211ENST00000611640 GLIPR1L2Q4G1C9 344 aa21.85■■□□□ 1.09
KDM4B-211ENST00000611640 MYH16Q9H6N6 1097 aa21.84■■□□□ 1.09
KDM4B-211ENST00000611640 PLPPR3Q6T4P5 718 aa21.83■■□□□ 1.09
KDM4B-211ENST00000611640 ANP32EQ9BTT0 268 aa21.83■■□□□ 1.09
KDM4B-211ENST00000611640 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
KDM4B-211ENST00000611640 BECN1Q14457 450 aa21.81■■□□□ 1.08
KDM4B-211ENST00000611640 SIN3AQ96ST3 1273 aa21.8■■□□□ 1.08
KDM4B-211ENST00000611640 PLEKHD1A6NEE1 506 aa21.8■■□□□ 1.08
KDM4B-211ENST00000611640 RGL3Q3MIN7 710 aa21.8■■□□□ 1.08
KDM4B-211ENST00000611640 SENP3-EIF4A1A0A087X0R7 540 aa21.79■■□□□ 1.08
KDM4B-211ENST00000611640 NACADO15069 1562 aa21.78■■□□□ 1.08
KDM4B-211ENST00000611640 CARD11Q9BXL7 1154 aa21.75■■□□□ 1.07
KDM4B-211ENST00000611640 CFDP1Q9UEE9 299 aaPredicted RBP21.74■■□□□ 1.07
KDM4B-211ENST00000611640 PPP4R2Q9NY27 417 aa21.74■■□□□ 1.07
KDM4B-211ENST00000611640 KCNH8Q96L42 1107 aa21.73■■□□□ 1.07
KDM4B-211ENST00000611640 KNSTRNQ9Y448 316 aa21.73■■□□□ 1.07
KDM4B-211ENST00000611640 CDCA8Q53HL2 280 aa21.71■■□□□ 1.07
KDM4B-211ENST00000611640 CCNB3Q8WWL7 1395 aa21.69■■□□□ 1.06
KDM4B-211ENST00000611640 CFAP53Q96M91 514 aa21.68■■□□□ 1.06
KDM4B-211ENST00000611640 BAZ1AQ9NRL2 1556 aaPredicted RBP21.66■■□□□ 1.06
KDM4B-211ENST00000611640 SENP3Q9H4L4 574 aaPredicted RBP21.65■■□□□ 1.06
KDM4B-211ENST00000611640 PPM1GO15355 546 aaPredicted RBP21.63■■□□□ 1.05
KDM4B-211ENST00000611640 SOGA1O94964 1423 aa21.62■■□□□ 1.05
KDM4B-211ENST00000611640 GOLGA6L22H0YM25 854 aa21.61■■□□□ 1.05
KDM4B-211ENST00000611640 TRIM44Q96DX7 344 aaPredicted RBP21.61■■□□□ 1.05
KDM4B-211ENST00000611640 FHAD1B1AJZ9 1412 aa21.59■■□□□ 1.05
KDM4B-211ENST00000611640 PPP1R15AO75807 674 aaPredicted RBP21.59■■□□□ 1.05
KDM4B-211ENST00000611640 CECR2Q9BXF3 1484 aa21.59■■□□□ 1.05
KDM4B-211ENST00000611640 FTSJ3Q8IY81 847 aaKnown RBP21.58■■□□□ 1.05
KDM4B-211ENST00000611640 NCLP19338 710 aaKnown RBP21.58■■□□□ 1.04
KDM4B-211ENST00000611640 TIMELESSQ9UNS1 1208 aa21.57■■□□□ 1.04
KDM4B-211ENST00000611640 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
KDM4B-211ENST00000611640 B4GALNT3Q6L9W6 998 aa21.55■■□□□ 1.04
KDM4B-211ENST00000611640 LAS1LQ9Y4W2 734 aaKnown RBP21.54■■□□□ 1.04
KDM4B-211ENST00000611640 NEUROD2Q15784 382 aa21.54■■□□□ 1.04
KDM4B-211ENST00000611640 CCER2I3L3R5 266 aa21.54■■□□□ 1.04
KDM4B-211ENST00000611640 CC2D1BQ5T0F9 858 aaKnown RBP21.52■■□□□ 1.04
KDM4B-211ENST00000611640 RGS3P49796 1198 aa21.52■■□□□ 1.04
KDM4B-211ENST00000611640 ZBTB7CA1YPR0 619 aa21.51■■□□□ 1.03
KDM4B-211ENST00000611640 VPS8Q8N3P4 1428 aa21.51■■□□□ 1.03
KDM4B-211ENST00000611640 SETD5Q9C0A6 1442 aa21.5■■□□□ 1.03
KDM4B-211ENST00000611640 C14orf37Q86TY3 774 aa21.49■■□□□ 1.03
KDM4B-211ENST00000611640 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
KDM4B-211ENST00000611640 CARMIL1Q5VZK9 1371 aa21.49■■□□□ 1.03
KDM4B-211ENST00000611640 CASC1Q6TDU7 716 aa21.48■■□□□ 1.03
KDM4B-211ENST00000611640 FRAT1Q92837 279 aaPredicted RBP21.47■■□□□ 1.03
KDM4B-211ENST00000611640 NUDCQ9Y266 331 aa21.46■■□□□ 1.03
KDM4B-211ENST00000611640 CUX2O14529 1486 aa21.45■■□□□ 1.02
KDM4B-211ENST00000611640 DCAF11Q8TEB1 546 aa21.43■■□□□ 1.02
KDM4B-211ENST00000611640 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
KDM4B-211ENST00000611640 TMF1P82094 1093 aa21.42■■□□□ 1.02
KDM4B-211ENST00000611640 PLEKHG5O94827 1062 aa21.42■■□□□ 1.02
KDM4B-211ENST00000611640 ERICH6BQ5W0A0 696 aa21.41■■□□□ 1.02
KDM4B-211ENST00000611640 ARHGAP35Q9NRY4 1499 aa21.41■■□□□ 1.02
KDM4B-211ENST00000611640 TNNT2P45379 298 aaPredicted RBP21.41■■□□□ 1.02
KDM4B-211ENST00000611640 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
KDM4B-211ENST00000611640 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
KDM4B-211ENST00000611640 PTMAP06454 111 aaKnown RBP21.39■■□□□ 1.01
KDM4B-211ENST00000611640 EIF4G1Q04637 1599 aaKnown RBP21.39■■□□□ 1.01
KDM4B-211ENST00000611640 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
KDM4B-211ENST00000611640 MS4A1P11836 297 aa21.37■■□□□ 1.01
KDM4B-211ENST00000611640 CCDC88BA6NC98 1476 aa21.37■■□□□ 1.01
KDM4B-211ENST00000611640 POGKQ9P215 609 aa21.36■■□□□ 1.01
KDM4B-211ENST00000611640 CHMP4BQ9H444 224 aaKnown RBP21.35■■□□□ 1.01
KDM4B-211ENST00000611640 MROH2BQ7Z745 1585 aa21.34■■□□□ 1.01
KDM4B-211ENST00000611640 RTN4Q9NQC3 1192 aaKnown RBP21.34■■□□□ 1.01
KDM4B-211ENST00000611640 A0A0G2JS52 829 aa21.33■■□□□ 1
KDM4B-211ENST00000611640 RAB3GAP2Q9H2M9 1393 aa21.32■■□□□ 1
KDM4B-211ENST00000611640 U2SURPO15042 1029 aaKnown RBP21.32■■□□□ 1
KDM4B-211ENST00000611640 HSP90AB1P08238 724 aaKnown RBP21.31■■□□□ 1
KDM4B-211ENST00000611640 TPRNQ4KMQ1 711 aa21.3■■□□□ 1
KDM4B-211ENST00000611640 DNTTIP2Q5QJE6 756 aaKnown RBP21.28■■□□□ 1
KDM4B-211ENST00000611640 ZRSR1Q15695 479 aaKnown RBP21.28■■□□□ 1
KDM4B-211ENST00000611640 PNNQ9H307 717 aaKnown RBP21.28■■□□□ 1
KDM4B-211ENST00000611640 NAP1L5Q96NT1 182 aaPredicted RBP21.28■■□□□ 1
KDM4B-211ENST00000611640 FOXD1Q16676 465 aa21.26■□□□□ 0.99
KDM4B-211ENST00000611640 KTN1Q86UP2 1357 aaKnown RBP21.26■□□□□ 0.99
KDM4B-211ENST00000611640 PKD2Q13563 968 aa21.25■□□□□ 0.99
KDM4B-211ENST00000611640 DEKP35659 375 aaKnown RBP21.24■□□□□ 0.99
KDM4B-211ENST00000611640 KANK1Q14678 1352 aa21.24■□□□□ 0.99
KDM4B-211ENST00000611640 CDK11BP21127 795 aaKnown RBP21.24■□□□□ 0.99
KDM4B-211ENST00000611640 ARID4BQ4LE39 1312 aaPredicted RBP21.24■□□□□ 0.99
KDM4B-211ENST00000611640 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
KDM4B-211ENST00000611640 HSCBQ8IWL3 235 aa21.22■□□□□ 0.99
KDM4B-211ENST00000611640 MORC1Q86VD1 984 aa21.22■□□□□ 0.99
KDM4B-211ENST00000611640 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
KDM4B-211ENST00000611640 RCAN3Q9UKA8 241 aa21.18■□□□□ 0.98
KDM4B-211ENST00000611640 RALBP1Q15311 655 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms