RNA–Protein interactions for RNA: ENST00000602861.5

HCG18-248, Transcript of HLA complex group 18, humanhuman

TSL 3

Gene HCG18, Length 372 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-248ENST00000602861 URB2Q14146 1524 aaKnown RBP13.22□□□□□ -0.29
HCG18-248ENST00000602861 ABCB7O75027 752 aa13.16□□□□□ -0.3
HCG18-248ENST00000602861 ZBTB12Q9Y330 459 aaPredicted RBP13.16□□□□□ -0.3
HCG18-248ENST00000602861 OSCARQ8IYS5 282 aa13.14□□□□□ -0.31
HCG18-248ENST00000602861 CCDC88BA6NC98 1476 aa13.12□□□□□ -0.31
HCG18-248ENST00000602861 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
HCG18-248ENST00000602861 PRDM2Q13029 1718 aa13.12□□□□□ -0.31
HCG18-248ENST00000602861 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
HCG18-248ENST00000602861 HRCP23327 699 aa13.08□□□□□ -0.32
HCG18-248ENST00000602861 ZNF608Q9ULD9 1512 aaPredicted RBP13.08□□□□□ -0.32
HCG18-248ENST00000602861 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
HCG18-248ENST00000602861 EIF4G3O43432 1585 aaKnown RBP13.02□□□□□ -0.33
HCG18-248ENST00000602861 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
HCG18-248ENST00000602861 DNMBPQ6XZF7 1577 aa13.02□□□□□ -0.33
HCG18-248ENST00000602861 RIMBP3CA6NJZ7 1639 aa12.99□□□□□ -0.33
HCG18-248ENST00000602861 RIMBP3BA6NNM3 1639 aa12.99□□□□□ -0.33
HCG18-248ENST00000602861 RIMBP3Q9UFD9 1639 aa12.99□□□□□ -0.33
HCG18-248ENST00000602861 IFNLR1Q8IU57 520 aaPredicted RBP12.99□□□□□ -0.33
HCG18-248ENST00000602861 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
HCG18-248ENST00000602861 DSG3P32926 999 aa12.96□□□□□ -0.33
HCG18-248ENST00000602861 TARBP1Q13395 1621 aaKnown RBP12.94□□□□□ -0.34
HCG18-248ENST00000602861 AQRO60306 1485 aaKnown RBP eCLIP12.93□□□□□ -0.34
HCG18-248ENST00000602861 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
HCG18-248ENST00000602861 ZNF692Q9BU19 519 aaPredicted RBP12.92□□□□□ -0.34
HCG18-248ENST00000602861 CHD1O14646 1710 aa12.89□□□□□ -0.35
HCG18-248ENST00000602861 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
HCG18-248ENST00000602861 RAD54L2Q9Y4B4 1467 aa12.88□□□□□ -0.35
HCG18-248ENST00000602861 SOGA1O94964 1423 aa12.86□□□□□ -0.35
HCG18-248ENST00000602861 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
HCG18-248ENST00000602861 CYB5RLQ6IPT4 315 aa12.85□□□□□ -0.35
HCG18-248ENST00000602861 FGD5Q6ZNL6 1462 aa12.85□□□□□ -0.35
HCG18-248ENST00000602861 SPDYE2BA6NHP3 402 aa12.84□□□□□ -0.35
HCG18-248ENST00000602861 SPDYE6P0CI01 402 aa12.84□□□□□ -0.35
HCG18-248ENST00000602861 SPDYE2Q495Y8 402 aa12.84□□□□□ -0.35
HCG18-248ENST00000602861 ARAP1Q96P48 1450 aa12.84□□□□□ -0.35
HCG18-248ENST00000602861 LOC105371045A0A1W2PR82 267 aa12.83□□□□□ -0.36
HCG18-248ENST00000602861 SNAPC4Q5SXM2 1469 aa12.83□□□□□ -0.36
HCG18-248ENST00000602861 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
HCG18-248ENST00000602861 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
HCG18-248ENST00000602861 CUX1P39880 1505 aa12.81□□□□□ -0.36
HCG18-248ENST00000602861 WDR97A6NE52 1622 aa12.8□□□□□ -0.36
HCG18-248ENST00000602861 SSUH2Q9Y2M2 353 aa12.79□□□□□ -0.36
HCG18-248ENST00000602861 GRIN2BQ13224 1484 aa12.78□□□□□ -0.36
HCG18-248ENST00000602861 MAGI1Q96QZ7 1491 aaPredicted RBP12.78□□□□□ -0.36
HCG18-248ENST00000602861 PKD2Q13563 968 aa12.77□□□□□ -0.37
HCG18-248ENST00000602861 CLASP1Q7Z460 1538 aa12.77□□□□□ -0.37
HCG18-248ENST00000602861 CHMP7Q8WUX9 453 aaPredicted RBP12.76□□□□□ -0.37
HCG18-248ENST00000602861 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
HCG18-248ENST00000602861 SPOCK2Q92563 424 aa12.75□□□□□ -0.37
HCG18-248ENST00000602861 SYNJ2O15056 1496 aa12.74□□□□□ -0.37
HCG18-248ENST00000602861 PLCB2Q00722 1185 aa12.73□□□□□ -0.37
HCG18-248ENST00000602861 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
HCG18-248ENST00000602861 PLCD3Q8N3E9 789 aa12.73□□□□□ -0.37
HCG18-248ENST00000602861 GAPVD1Q14C86 1478 aa12.71□□□□□ -0.38
HCG18-248ENST00000602861 TRIM26Q12899 539 aaPredicted RBP12.69□□□□□ -0.38
HCG18-248ENST00000602861 PBRM1Q86U86 1689 aa12.69□□□□□ -0.38
HCG18-248ENST00000602861 ABCA10Q8WWZ4 1543 aa12.68□□□□□ -0.38
HCG18-248ENST00000602861 ABCA5Q8WWZ7 1642 aa12.67□□□□□ -0.38
HCG18-248ENST00000602861 MIER1Q8N108 512 aa12.67□□□□□ -0.38
HCG18-248ENST00000602861 ECM2O94769 699 aaPredicted RBP12.63□□□□□ -0.39
HCG18-248ENST00000602861 WRNQ14191 1432 aaPredicted RBP eCLIP12.62□□□□□ -0.39
HCG18-248ENST00000602861 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
HCG18-248ENST00000602861 POTEHQ6S545 545 aa12.61□□□□□ -0.39
HCG18-248ENST00000602861 ADAMTS12P58397 1594 aa12.6□□□□□ -0.39
HCG18-248ENST00000602861 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
HCG18-248ENST00000602861 TOP2BQ02880 1626 aa12.58□□□□□ -0.4
HCG18-248ENST00000602861 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
HCG18-248ENST00000602861 BIVM-ERCC5R4GMW8 1640 aa12.57□□□□□ -0.4
HCG18-248ENST00000602861 CEP170Q5SW79 1584 aa12.56□□□□□ -0.4
HCG18-248ENST00000602861 NUP160Q12769 1436 aa12.56□□□□□ -0.4
HCG18-248ENST00000602861 ERCC6L2Q5T890 1561 aa12.56□□□□□ -0.4
HCG18-248ENST00000602861 FHAD1B1AJZ9 1412 aa12.55□□□□□ -0.4
HCG18-248ENST00000602861 ZBTB47Q9UFB7 747 aaPredicted RBP12.53□□□□□ -0.4
HCG18-248ENST00000602861 ERICH3Q5RHP9 1530 aa12.52□□□□□ -0.4
HCG18-248ENST00000602861 SHROOM2Q13796 1616 aa12.5□□□□□ -0.41
HCG18-248ENST00000602861 ZEB1P37275 1124 aaPredicted RBP12.48□□□□□ -0.41
HCG18-248ENST00000602861 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.48□□□□□ -0.41
HCG18-248ENST00000602861 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
HCG18-248ENST00000602861 BBXQ8WY36 941 aaPredicted RBP12.47□□□□□ -0.41
HCG18-248ENST00000602861 RGL2O15211 777 aa12.46□□□□□ -0.41
HCG18-248ENST00000602861 PRG4Q92954 1404 aaPredicted RBP12.45□□□□□ -0.42
HCG18-248ENST00000602861 FAM9AQ8IZU1 332 aaPredicted RBP12.44□□□□□ -0.42
HCG18-248ENST00000602861 RUSC2Q8N2Y8 1516 aa12.43□□□□□ -0.42
HCG18-248ENST00000602861 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
HCG18-248ENST00000602861 JPH4Q96JJ6 628 aa12.4□□□□□ -0.42
HCG18-248ENST00000602861 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
HCG18-248ENST00000602861 VSIG10Q8N0Z9 540 aa12.38□□□□□ -0.43
HCG18-248ENST00000602861 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
HCG18-248ENST00000602861 KIF27Q86VH2 1401 aa12.35□□□□□ -0.43
HCG18-248ENST00000602861 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
HCG18-248ENST00000602861 RBM42Q9BTD8 480 aaKnown RBP12.34□□□□□ -0.43
HCG18-248ENST00000602861 KIF13AQ9H1H9 1805 aa12.33□□□□□ -0.44
HCG18-248ENST00000602861 CUL7Q14999 1698 aa12.32□□□□□ -0.44
HCG18-248ENST00000602861 KIAA0586Q9BVV6 1533 aa12.32□□□□□ -0.44
HCG18-248ENST00000602861 AKT1S1Q96B36 256 aa12.32□□□□□ -0.44
HCG18-248ENST00000602861 ADCY10Q96PN6 1610 aa12.32□□□□□ -0.44
HCG18-248ENST00000602861 ABCC10Q5T3U5 1492 aa12.32□□□□□ -0.44
HCG18-248ENST00000602861 MAPKBP1O60336 1514 aa12.32□□□□□ -0.44
HCG18-248ENST00000602861 IGF1RP08069 1367 aa12.31□□□□□ -0.44
HCG18-248ENST00000602861 CHGAP10645 457 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms