RNA–Protein interactions for RNA: ENST00000600160.2

UCA1-203, Transcript of urothelial cancer associated 1, humanhuman

TSL 2

Gene UCA1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-203ENST00000600160 SCUBE2Q9NQ36 999 aa11.59□□□□□ -0.55
UCA1-203ENST00000600160 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
UCA1-203ENST00000600160 PHF12Q96QT6 1004 aa11.58□□□□□ -0.56
UCA1-203ENST00000600160 ASTLQ6HA08 431 aaPredicted RBP11.57□□□□□ -0.56
UCA1-203ENST00000600160 CREBZFQ9NS37 354 aa11.57□□□□□ -0.56
UCA1-203ENST00000600160 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
UCA1-203ENST00000600160 CDAN1Q8IWY9 1227 aa11.5□□□□□ -0.57
UCA1-203ENST00000600160 STAG3Q9UJ98 1225 aa11.48□□□□□ -0.57
UCA1-203ENST00000600160 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
UCA1-203ENST00000600160 MS4A3Q96HJ5 214 aa11.42□□□□□ -0.58
UCA1-203ENST00000600160 ATN1P54259 1190 aaPredicted RBP11.31□□□□□ -0.6
UCA1-203ENST00000600160 MMRN1Q13201 1228 aa11.3□□□□□ -0.6
UCA1-203ENST00000600160 POTEFA5A3E0 1075 aa11.25□□□□□ -0.61
UCA1-203ENST00000600160 MNX1P50219 401 aaPredicted RBP11.24□□□□□ -0.61
UCA1-203ENST00000600160 SPNS2Q8IVW8 549 aa11.24□□□□□ -0.61
UCA1-203ENST00000600160 RB1CC1Q8TDY2 1594 aa11.21□□□□□ -0.61
UCA1-203ENST00000600160 ST18O60284 1047 aa11.19□□□□□ -0.62
UCA1-203ENST00000600160 BMP2KQ9NSY1 1161 aaPredicted RBP11.18□□□□□ -0.62
UCA1-203ENST00000600160 SEC24BO95487 1268 aa11.16□□□□□ -0.62
UCA1-203ENST00000600160 TIE1P35590 1138 aa11.14□□□□□ -0.63
UCA1-203ENST00000600160 CCDC61Q9Y6R9 512 aa11.11□□□□□ -0.63
UCA1-203ENST00000600160 SLAIN1Q8ND83 568 aa11.1□□□□□ -0.63
UCA1-203ENST00000600160 KIF12Q96FN5 646 aa11.1□□□□□ -0.63
UCA1-203ENST00000600160 TMEM121BQ9BXQ6 578 aaPredicted RBP11.1□□□□□ -0.63
UCA1-203ENST00000600160 COLQQ9Y215 455 aaPredicted RBP11.1□□□□□ -0.63
UCA1-203ENST00000600160 TSPYL2Q9H2G4 693 aaPredicted RBP11.09□□□□□ -0.63
UCA1-203ENST00000600160 NACADO15069 1562 aa11.08□□□□□ -0.64
UCA1-203ENST00000600160 IER5LQ5T953 404 aa11.07□□□□□ -0.64
UCA1-203ENST00000600160 TRPC6Q9Y210 931 aa11.03□□□□□ -0.64
UCA1-203ENST00000600160 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
UCA1-203ENST00000600160 TTLL13PA6NNM8 815 aa11.01□□□□□ -0.65
UCA1-203ENST00000600160 SPDYE4A6NLX3 237 aa10.97□□□□□ -0.65
UCA1-203ENST00000600160 SNPHO15079 494 aa10.97□□□□□ -0.65
UCA1-203ENST00000600160 MAP3K13O43283 966 aa10.97□□□□□ -0.65
UCA1-203ENST00000600160 TRIM35Q9UPQ4 493 aa10.94□□□□□ -0.66
UCA1-203ENST00000600160 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
UCA1-203ENST00000600160 MYO15BQ96JP2 1530 aa10.88□□□□□ -0.67
UCA1-203ENST00000600160 PLCG2P16885 1265 aa10.87□□□□□ -0.67
UCA1-203ENST00000600160 SGIP1Q9BQI5 828 aa10.85□□□□□ -0.67
UCA1-203ENST00000600160 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
UCA1-203ENST00000600160 EMP3P54852 163 aa10.8□□□□□ -0.68
UCA1-203ENST00000600160 KRTAP3-3Q9BYR6 98 aa10.79□□□□□ -0.68
UCA1-203ENST00000600160 KRTAP3-2Q9BYR7 98 aa10.79□□□□□ -0.68
UCA1-203ENST00000600160 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.79□□□□□ -0.68
UCA1-203ENST00000600160 BICRAQ9NZM4 1560 aa10.77□□□□□ -0.68
UCA1-203ENST00000600160 SHROOM4Q9ULL8 1493 aa10.77□□□□□ -0.69
UCA1-203ENST00000600160 PCDHB13Q9Y5F0 798 aa10.77□□□□□ -0.69
UCA1-203ENST00000600160 IRX5P78411 483 aaPredicted RBP10.75□□□□□ -0.69
UCA1-203ENST00000600160 PLEKHG5O94827 1062 aa10.74□□□□□ -0.69
UCA1-203ENST00000600160 RASEFQ8IZ41 740 aa10.74□□□□□ -0.69
UCA1-203ENST00000600160 HS3ST6Q96QI5 342 aa10.73□□□□□ -0.69
UCA1-203ENST00000600160 TMEM106CQ9BVX2 250 aa10.72□□□□□ -0.69
UCA1-203ENST00000600160 ZCCHC6Q5VYS8 1495 aaKnown RBP10.71□□□□□ -0.69
UCA1-203ENST00000600160 OCEL1Q9H607 264 aa10.7□□□□□ -0.7
UCA1-203ENST00000600160 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
UCA1-203ENST00000600160 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
UCA1-203ENST00000600160 FAM205CA6NFA0 338 aa10.67□□□□□ -0.7
UCA1-203ENST00000600160 POTEB3A0JP26 581 aa10.65□□□□□ -0.7
UCA1-203ENST00000600160 POTEBQ6S5H4 581 aa10.65□□□□□ -0.7
UCA1-203ENST00000600160 IFNL1Q8IU54 200 aa10.65□□□□□ -0.7
UCA1-203ENST00000600160 SCRIBQ14160 1630 aa10.65□□□□□ -0.7
UCA1-203ENST00000600160 CC2D2AQ9P2K1 1620 aa10.64□□□□□ -0.71
UCA1-203ENST00000600160 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
UCA1-203ENST00000600160 EIF4G1Q04637 1599 aaKnown RBP10.6□□□□□ -0.71
UCA1-203ENST00000600160 C3orf67Q6ZVT6 689 aa10.59□□□□□ -0.71
UCA1-203ENST00000600160 MIER1Q8N108 512 aa10.57□□□□□ -0.72
UCA1-203ENST00000600160 PROM2Q8N271 834 aa10.57□□□□□ -0.72
UCA1-203ENST00000600160 L3MBTL3Q96JM7 780 aaPredicted RBP10.5□□□□□ -0.73
UCA1-203ENST00000600160 MYT1LQ9UL68 1186 aa10.5□□□□□ -0.73
UCA1-203ENST00000600160 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
UCA1-203ENST00000600160 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
UCA1-203ENST00000600160 NUBP1P53384 320 aa10.44□□□□□ -0.74
UCA1-203ENST00000600160 PDCD7Q8N8D1 485 aaKnown RBP10.44□□□□□ -0.74
UCA1-203ENST00000600160 PTGER2P43116 358 aa10.41□□□□□ -0.74
UCA1-203ENST00000600160 PLCD3Q8N3E9 789 aa10.4□□□□□ -0.74
UCA1-203ENST00000600160 ERBB3P21860 1342 aa10.39□□□□□ -0.75
UCA1-203ENST00000600160 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
UCA1-203ENST00000600160 ZNF710Q8N1W2 664 aa10.35□□□□□ -0.75
UCA1-203ENST00000600160 DNAJC5Q9H3Z4 198 aa10.35□□□□□ -0.75
UCA1-203ENST00000600160 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
UCA1-203ENST00000600160 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
UCA1-203ENST00000600160 MKRN3Q13064 507 aaKnown RBP10.34□□□□□ -0.75
UCA1-203ENST00000600160 CSRNP3Q8WYN3 585 aa10.34□□□□□ -0.75
UCA1-203ENST00000600160 DOK7Q18PE1 504 aa10.31□□□□□ -0.76
UCA1-203ENST00000600160 ERCC6Q03468 1493 aa10.3□□□□□ -0.76
UCA1-203ENST00000600160 CUX2O14529 1486 aa10.29□□□□□ -0.76
UCA1-203ENST00000600160 VARS2Q5ST30 1063 aaKnown RBP10.28□□□□□ -0.76
UCA1-203ENST00000600160 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.28□□□□□ -0.76
UCA1-203ENST00000600160 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
UCA1-203ENST00000600160 RIMBP2O15034 1052 aa10.26□□□□□ -0.77
UCA1-203ENST00000600160 PYGBP11216 843 aa10.26□□□□□ -0.77
UCA1-203ENST00000600160 ZNF687Q8N1G0 1237 aa10.25□□□□□ -0.77
UCA1-203ENST00000600160 G3V3G9 751 aa10.24□□□□□ -0.77
UCA1-203ENST00000600160 DCAF8Q5TAQ9 597 aa10.24□□□□□ -0.77
UCA1-203ENST00000600160 NCAPD3P42695 1498 aa10.21□□□□□ -0.78
UCA1-203ENST00000600160 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
UCA1-203ENST00000600160 ZNF467Q7Z7K2 595 aaPredicted RBP10.19□□□□□ -0.78
UCA1-203ENST00000600160 ILDR1Q86SU0 546 aaPredicted RBP10.18□□□□□ -0.78
UCA1-203ENST00000600160 SMARCA2P51531 1590 aa10.18□□□□□ -0.78
UCA1-203ENST00000600160 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms