RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 SAMD1Q6SPF0 538 aaPredicted RBP10.51□□□□□ -0.73
ERCC1-216ENST00000592444 PEG3Q9GZU2 1588 aa10.51□□□□□ -0.73
ERCC1-216ENST00000592444 EIF4G3O43432 1585 aaKnown RBP10.49□□□□□ -0.73
ERCC1-216ENST00000592444 GAPVD1Q14C86 1478 aa10.47□□□□□ -0.73
ERCC1-216ENST00000592444 KIF13AQ9H1H9 1805 aa10.47□□□□□ -0.73
ERCC1-216ENST00000592444 CLASP1Q7Z460 1538 aa10.46□□□□□ -0.74
ERCC1-216ENST00000592444 ADGRL1O94910 1474 aa10.44□□□□□ -0.74
ERCC1-216ENST00000592444 RBM42Q9BTD8 480 aaKnown RBP10.44□□□□□ -0.74
ERCC1-216ENST00000592444 AQRO60306 1485 aaKnown RBP eCLIP10.43□□□□□ -0.741e-18■■■■■ 53.6
ERCC1-216ENST00000592444 KDM6BO15054 1643 aa10.4□□□□□ -0.75
ERCC1-216ENST00000592444 FAM69CQ0P6D2 419 aa10.38□□□□□ -0.75
ERCC1-216ENST00000592444 CFTRP13569 1480 aa10.37□□□□□ -0.75
ERCC1-216ENST00000592444 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
ERCC1-216ENST00000592444 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
ERCC1-216ENST00000592444 MROH2BQ7Z745 1585 aa10.33□□□□□ -0.76
ERCC1-216ENST00000592444 SPATA31D1Q6ZQQ2 1576 aa10.31□□□□□ -0.76
ERCC1-216ENST00000592444 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
ERCC1-216ENST00000592444 SLC4A1APQ9BWU0 796 aaKnown RBP10.31□□□□□ -0.76
ERCC1-216ENST00000592444 TOPBP1Q92547 1522 aa10.28□□□□□ -0.76
ERCC1-216ENST00000592444 ABCC10Q5T3U5 1492 aa10.28□□□□□ -0.76
ERCC1-216ENST00000592444 POLA2Q14181 598 aa10.27□□□□□ -0.77
ERCC1-216ENST00000592444 SNAPC4Q5SXM2 1469 aa10.27□□□□□ -0.77
ERCC1-216ENST00000592444 TARBP1Q13395 1621 aaKnown RBP10.25□□□□□ -0.77
ERCC1-216ENST00000592444 CHRDL2Q6WN34 429 aa10.25□□□□□ -0.77
ERCC1-216ENST00000592444 TSPOAP1O95153 1857 aa10.22□□□□□ -0.77
ERCC1-216ENST00000592444 TDRD9Q8NDG6 1382 aaKnown RBP10.22□□□□□ -0.77
ERCC1-216ENST00000592444 CERKQ8TCT0 537 aa10.21□□□□□ -0.77
ERCC1-216ENST00000592444 DIP2BQ9P265 1576 aa10.21□□□□□ -0.78
ERCC1-216ENST00000592444 FOXD4L1Q9NU39 408 aa10.2□□□□□ -0.78
ERCC1-216ENST00000592444 ABCC8Q09428 1581 aa10.16□□□□□ -0.78
ERCC1-216ENST00000592444 MAGI1Q96QZ7 1491 aaPredicted RBP10.16□□□□□ -0.78
ERCC1-216ENST00000592444 NPM1P06748 294 aaKnown RBP eCLIP10.14□□□□□ -0.79
ERCC1-216ENST00000592444 RAD54L2Q9Y4B4 1467 aa10.14□□□□□ -0.79
ERCC1-216ENST00000592444 DNMBPQ6XZF7 1577 aa10.14□□□□□ -0.79
ERCC1-216ENST00000592444 WIZO95785 1651 aa10.13□□□□□ -0.79
ERCC1-216ENST00000592444 MAPKBP1O60336 1514 aa10.12□□□□□ -0.79
ERCC1-216ENST00000592444 POLA1P09884 1462 aaPredicted RBP10.11□□□□□ -0.79
ERCC1-216ENST00000592444 PRDM2Q13029 1718 aa10.11□□□□□ -0.79
ERCC1-216ENST00000592444 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
ERCC1-216ENST00000592444 ZBTB12Q9Y330 459 aaPredicted RBP10.11□□□□□ -0.79
ERCC1-216ENST00000592444 TOP2BQ02880 1626 aa10.11□□□□□ -0.79
ERCC1-216ENST00000592444 AKT1S1Q96B36 256 aa10.09□□□□□ -0.79
ERCC1-216ENST00000592444 GRIN2BQ13224 1484 aa10.08□□□□□ -0.8
ERCC1-216ENST00000592444 SOGA1O94964 1423 aa10.07□□□□□ -0.8
ERCC1-216ENST00000592444 COL17A1Q9UMD9 1497 aaPredicted RBP10.06□□□□□ -0.8
ERCC1-216ENST00000592444 ATF5Q9Y2D1 282 aaPredicted RBP10.06□□□□□ -0.8
ERCC1-216ENST00000592444 ZBTB22O15209 634 aa10.03□□□□□ -0.8
ERCC1-216ENST00000592444 WDR97A6NE52 1622 aa10.02□□□□□ -0.81
ERCC1-216ENST00000592444 SP7Q8TDD2 431 aaPredicted RBP10.01□□□□□ -0.81
ERCC1-216ENST00000592444 PCF11O94913 1555 aaKnown RBP10.01□□□□□ -0.81
ERCC1-216ENST00000592444 SHROOM2Q13796 1616 aa10□□□□□ -0.81
ERCC1-216ENST00000592444 PPRC1Q5VV67 1664 aaKnown RBP9.99□□□□□ -0.81
ERCC1-216ENST00000592444 HSPA2P54652 639 aa9.98□□□□□ -0.81
ERCC1-216ENST00000592444 ADCY10Q96PN6 1610 aa9.97□□□□□ -0.81
ERCC1-216ENST00000592444 PRG4Q92954 1404 aaPredicted RBP9.97□□□□□ -0.81
ERCC1-216ENST00000592444 PTPRMP28827 1452 aa9.97□□□□□ -0.81
ERCC1-216ENST00000592444 REM2Q8IYK8 340 aaPredicted RBP9.96□□□□□ -0.82
ERCC1-216ENST00000592444 NUP160Q12769 1436 aa9.95□□□□□ -0.82
ERCC1-216ENST00000592444 GRIN2AQ12879 1464 aa9.95□□□□□ -0.82
ERCC1-216ENST00000592444 PBRM1Q86U86 1689 aa9.94□□□□□ -0.82
ERCC1-216ENST00000592444 PIP4P2Q8N4L2 257 aa9.92□□□□□ -0.82
ERCC1-216ENST00000592444 FGD5Q6ZNL6 1462 aa9.91□□□□□ -0.82
ERCC1-216ENST00000592444 ATXN8OSP0DMR3 200 aa9.9□□□□□ -0.82
ERCC1-216ENST00000592444 TOP2AP11388 1531 aaKnown RBP9.89□□□□□ -0.83
ERCC1-216ENST00000592444 HAX1O00165 279 aa9.89□□□□□ -0.83
ERCC1-216ENST00000592444 JPH4Q96JJ6 628 aa9.89□□□□□ -0.83
ERCC1-216ENST00000592444 KIF21BO75037 1637 aa9.89□□□□□ -0.83
ERCC1-216ENST00000592444 GLI2P10070 1586 aa9.88□□□□□ -0.83
ERCC1-216ENST00000592444 PITPNM1O00562 1244 aa9.85□□□□□ -0.83
ERCC1-216ENST00000592444 ADAMTSL3P82987 1691 aa9.85□□□□□ -0.83
ERCC1-216ENST00000592444 CCDC88BA6NC98 1476 aa9.84□□□□□ -0.83
ERCC1-216ENST00000592444 TEX14Q8IWB6 1497 aa9.84□□□□□ -0.83
ERCC1-216ENST00000592444 ASXL2Q76L83 1435 aa9.83□□□□□ -0.84
ERCC1-216ENST00000592444 MED1Q15648 1581 aaPredicted RBP9.81□□□□□ -0.84
ERCC1-216ENST00000592444 FXR2P51116 673 aaKnown RBP eCLIP9.81□□□□□ -0.84
ERCC1-216ENST00000592444 PLB1Q6P1J6 1458 aa9.8□□□□□ -0.84
ERCC1-216ENST00000592444 MAP3K4Q9Y6R4 1608 aa9.79□□□□□ -0.84
ERCC1-216ENST00000592444 ADAMTS12P58397 1594 aa9.79□□□□□ -0.84
ERCC1-216ENST00000592444 ABCA5Q8WWZ7 1642 aa9.78□□□□□ -0.84
ERCC1-216ENST00000592444 MADDQ8WXG6 1647 aa9.77□□□□□ -0.85
ERCC1-216ENST00000592444 EPRSP07814 1512 aaKnown RBP9.75□□□□□ -0.85
ERCC1-216ENST00000592444 CUX1P39880 1505 aa9.74□□□□□ -0.85
ERCC1-216ENST00000592444 FHAD1B1AJZ9 1412 aa9.73□□□□□ -0.85
ERCC1-216ENST00000592444 ABCC2Q92887 1545 aa9.73□□□□□ -0.85
ERCC1-216ENST00000592444 SPDYE2BA6NHP3 402 aa9.73□□□□□ -0.85
ERCC1-216ENST00000592444 SPDYE6P0CI01 402 aa9.73□□□□□ -0.85
ERCC1-216ENST00000592444 SPDYE2Q495Y8 402 aa9.73□□□□□ -0.85
ERCC1-216ENST00000592444 TTBK1Q5TCY1 1321 aaPredicted RBP9.73□□□□□ -0.85
ERCC1-216ENST00000592444 KIAA0586Q9BVV6 1533 aa9.72□□□□□ -0.85
ERCC1-216ENST00000592444 UBAP1LF5GYI3 381 aa9.72□□□□□ -0.85
ERCC1-216ENST00000592444 BCORL1Q5H9F3 1711 aa9.72□□□□□ -0.85
ERCC1-216ENST00000592444 YEATS2Q9ULM3 1422 aa9.72□□□□□ -0.85
ERCC1-216ENST00000592444 ABCA10Q8WWZ4 1543 aa9.72□□□□□ -0.85
ERCC1-216ENST00000592444 RIMS1Q86UR5 1692 aaKnown RBP9.71□□□□□ -0.85
ERCC1-216ENST00000592444 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.86
ERCC1-216ENST00000592444 IQSEC2Q5JU85 1478 aa9.71□□□□□ -0.86
ERCC1-216ENST00000592444 SRCAPQ6ZRS2 3230 aa9.69□□□□□ -0.86
ERCC1-216ENST00000592444 CUL7Q14999 1698 aa9.69□□□□□ -0.86
ERCC1-216ENST00000592444 LTBP4Q8N2S1 1624 aa9.69□□□□□ -0.86
ERCC1-216ENST00000592444 PTPRGP23470 1445 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms