RNA–Protein interactions for RNA: ENST00000592097.5

NEDD4L-234, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-234ENST00000592097 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
NEDD4L-234ENST00000592097 SSUH2Q9Y2M2 353 aa14.14□□□□□ -0.15
NEDD4L-234ENST00000592097 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
NEDD4L-234ENST00000592097 FANCD2Q9BXW9 1451 aa14.1□□□□□ -0.15
NEDD4L-234ENST00000592097 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
NEDD4L-234ENST00000592097 FBXO3Q9UK99 471 aa14.08□□□□□ -0.16
NEDD4L-234ENST00000592097 CHD1O14646 1710 aa14.03□□□□□ -0.16
NEDD4L-234ENST00000592097 URB2Q14146 1524 aaKnown RBP14.02□□□□□ -0.16
NEDD4L-234ENST00000592097 RBM42Q9BTD8 480 aaKnown RBP14.01□□□□□ -0.17
NEDD4L-234ENST00000592097 EIF4G3O43432 1585 aaKnown RBP14□□□□□ -0.17
NEDD4L-234ENST00000592097 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
NEDD4L-234ENST00000592097 WIZO95785 1651 aa13.98□□□□□ -0.17
NEDD4L-234ENST00000592097 CFTRP13569 1480 aa13.95□□□□□ -0.18
NEDD4L-234ENST00000592097 IFT140Q96RY7 1462 aa13.93□□□□□ -0.18
NEDD4L-234ENST00000592097 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
NEDD4L-234ENST00000592097 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
NEDD4L-234ENST00000592097 AKT1S1Q96B36 256 aa13.88□□□□□ -0.19
NEDD4L-234ENST00000592097 CYB5RLQ6IPT4 315 aa13.87□□□□□ -0.19
NEDD4L-234ENST00000592097 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
NEDD4L-234ENST00000592097 STAG3Q9UJ98 1225 aa13.84□□□□□ -0.19
NEDD4L-234ENST00000592097 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
NEDD4L-234ENST00000592097 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
NEDD4L-234ENST00000592097 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
NEDD4L-234ENST00000592097 TARBP1Q13395 1621 aaKnown RBP13.77□□□□□ -0.21
NEDD4L-234ENST00000592097 CLASP1Q7Z460 1538 aa13.77□□□□□ -0.21
NEDD4L-234ENST00000592097 DNMBPQ6XZF7 1577 aa13.76□□□□□ -0.21
NEDD4L-234ENST00000592097 SYNJ1O43426 1573 aa13.73□□□□□ -0.21
NEDD4L-234ENST00000592097 ABCC8Q09428 1581 aa13.72□□□□□ -0.21
NEDD4L-234ENST00000592097 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
NEDD4L-234ENST00000592097 SPDYE1Q8NFV5 336 aaPredicted RBP13.71□□□□□ -0.21
NEDD4L-234ENST00000592097 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
NEDD4L-234ENST00000592097 RTN4Q9NQC3 1192 aaKnown RBP13.68□□□□□ -0.22
NEDD4L-234ENST00000592097 IFNLR1Q8IU57 520 aaPredicted RBP13.67□□□□□ -0.22
NEDD4L-234ENST00000592097 AQRO60306 1485 aaKnown RBP eCLIP13.64□□□□□ -0.235e-7■■■□□ 15.7
NEDD4L-234ENST00000592097 SNAPC4Q5SXM2 1469 aa13.62□□□□□ -0.23
NEDD4L-234ENST00000592097 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
NEDD4L-234ENST00000592097 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
NEDD4L-234ENST00000592097 MAGI1Q96QZ7 1491 aaPredicted RBP13.59□□□□□ -0.23
NEDD4L-234ENST00000592097 PBRM1Q86U86 1689 aa13.59□□□□□ -0.23
NEDD4L-234ENST00000592097 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
NEDD4L-234ENST00000592097 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
NEDD4L-234ENST00000592097 MIER1Q8N108 512 aa13.57□□□□□ -0.24
NEDD4L-234ENST00000592097 CLEC11AQ9Y240 323 aa13.56□□□□□ -0.24
NEDD4L-234ENST00000592097 PITPNM1O00562 1244 aa13.55□□□□□ -0.24
NEDD4L-234ENST00000592097 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
NEDD4L-234ENST00000592097 PRR29P0C7W0 189 aa13.52□□□□□ -0.25
NEDD4L-234ENST00000592097 SYNJ2O15056 1496 aa13.52□□□□□ -0.25
NEDD4L-234ENST00000592097 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
NEDD4L-234ENST00000592097 ZBTB47Q9UFB7 747 aaPredicted RBP13.5□□□□□ -0.25
NEDD4L-234ENST00000592097 CCDC88BA6NC98 1476 aa13.49□□□□□ -0.25
NEDD4L-234ENST00000592097 SPOCK2Q92563 424 aa13.48□□□□□ -0.25
NEDD4L-234ENST00000592097 RAD54L2Q9Y4B4 1467 aa13.48□□□□□ -0.25
NEDD4L-234ENST00000592097 GRIN2BQ13224 1484 aa13.47□□□□□ -0.25
NEDD4L-234ENST00000592097 ILDR1Q86SU0 546 aaPredicted RBP13.46□□□□□ -0.25
NEDD4L-234ENST00000592097 FGD5Q6ZNL6 1462 aa13.43□□□□□ -0.26
NEDD4L-234ENST00000592097 ERCC6L2Q5T890 1561 aa13.43□□□□□ -0.26
NEDD4L-234ENST00000592097 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
NEDD4L-234ENST00000592097 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
NEDD4L-234ENST00000592097 CHMP7Q8WUX9 453 aaPredicted RBP13.42□□□□□ -0.26
NEDD4L-234ENST00000592097 SOGA1O94964 1423 aa13.41□□□□□ -0.26
NEDD4L-234ENST00000592097 KDM6BO15054 1643 aa13.41□□□□□ -0.26
NEDD4L-234ENST00000592097 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
NEDD4L-234ENST00000592097 ABCA5Q8WWZ7 1642 aa13.41□□□□□ -0.26
NEDD4L-234ENST00000592097 CEP170Q5SW79 1584 aa13.4□□□□□ -0.26
NEDD4L-234ENST00000592097 ADAMTS12P58397 1594 aa13.36□□□□□ -0.27
NEDD4L-234ENST00000592097 DIP2BQ9P265 1576 aa13.36□□□□□ -0.27
NEDD4L-234ENST00000592097 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
NEDD4L-234ENST00000592097 POTEHQ6S545 545 aa13.33□□□□□ -0.28
NEDD4L-234ENST00000592097 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
NEDD4L-234ENST00000592097 CUX1P39880 1505 aa13.32□□□□□ -0.28
NEDD4L-234ENST00000592097 MAPKBP1O60336 1514 aa13.31□□□□□ -0.28
NEDD4L-234ENST00000592097 PKD2Q13563 968 aa13.31□□□□□ -0.28
NEDD4L-234ENST00000592097 FXR2P51116 673 aaKnown RBP eCLIP13.29□□□□□ -0.289e-11■■■■□ 23.7
NEDD4L-234ENST00000592097 TSPOAP1O95153 1857 aa13.29□□□□□ -0.28
NEDD4L-234ENST00000592097 ABCC10Q5T3U5 1492 aa13.29□□□□□ -0.28
NEDD4L-234ENST00000592097 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
NEDD4L-234ENST00000592097 NUP160Q12769 1436 aa13.28□□□□□ -0.28
NEDD4L-234ENST00000592097 HECW2Q9P2P5 1572 aa13.28□□□□□ -0.28
NEDD4L-234ENST00000592097 NUBP1P53384 320 aa13.26□□□□□ -0.29
NEDD4L-234ENST00000592097 ABCA10Q8WWZ4 1543 aa13.25□□□□□ -0.29
NEDD4L-234ENST00000592097 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
NEDD4L-234ENST00000592097 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
NEDD4L-234ENST00000592097 ADCY10Q96PN6 1610 aa13.21□□□□□ -0.29
NEDD4L-234ENST00000592097 CHADLQ6NUI6 762 aa13.21□□□□□ -0.29
NEDD4L-234ENST00000592097 RUSC2Q8N2Y8 1516 aa13.21□□□□□ -0.29
NEDD4L-234ENST00000592097 ADGRL1O94910 1474 aa13.21□□□□□ -0.3
NEDD4L-234ENST00000592097 PRKAR2AP13861 404 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-234ENST00000592097 GSE1Q14687 1217 aa13.19□□□□□ -0.3
NEDD4L-234ENST00000592097 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
NEDD4L-234ENST00000592097 CIZ1Q9ULV3 898 aaPredicted RBP13.17□□□□□ -0.3
NEDD4L-234ENST00000592097 FARP1Q9Y4F1 1045 aaPredicted RBP13.17□□□□□ -0.3
NEDD4L-234ENST00000592097 ECM2O94769 699 aaPredicted RBP13.16□□□□□ -0.3
NEDD4L-234ENST00000592097 PPRC1Q5VV67 1664 aaKnown RBP13.15□□□□□ -0.31
NEDD4L-234ENST00000592097 FAM69CQ0P6D2 419 aa13.14□□□□□ -0.31
NEDD4L-234ENST00000592097 FAM212AQ96EL1 285 aa13.14□□□□□ -0.31
NEDD4L-234ENST00000592097 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
NEDD4L-234ENST00000592097 RASEFQ8IZ41 740 aa13.12□□□□□ -0.31
NEDD4L-234ENST00000592097 PRG4Q92954 1404 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-234ENST00000592097 ERICH3Q5RHP9 1530 aa13.11□□□□□ -0.31
NEDD4L-234ENST00000592097 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms