RNA–Protein interactions for RNA: ENST00000584261.5

DDX42-218, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 510 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-218ENST00000584261 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
DDX42-218ENST00000584261 ATMINO43313 823 aaPredicted RBP13.48□□□□□ -0.25
DDX42-218ENST00000584261 POTEJP0CG39 1038 aa13.48□□□□□ -0.25
DDX42-218ENST00000584261 C7P10643 843 aa13.46□□□□□ -0.25
DDX42-218ENST00000584261 SLC39A7Q92504 469 aa13.46□□□□□ -0.25
DDX42-218ENST00000584261 TSPYL2Q9H2G4 693 aaPredicted RBP13.4□□□□□ -0.26
DDX42-218ENST00000584261 EHMT2Q96KQ7 1210 aa13.37□□□□□ -0.27
DDX42-218ENST00000584261 MAMSTRQ6ZN01 415 aa13.36□□□□□ -0.27
DDX42-218ENST00000584261 ATN1P54259 1190 aaPredicted RBP13.35□□□□□ -0.27
DDX42-218ENST00000584261 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
DDX42-218ENST00000584261 CCDC61Q9Y6R9 512 aa13.33□□□□□ -0.28
DDX42-218ENST00000584261 LCE2DQ5TA82 110 aaPredicted RBP13.31□□□□□ -0.28
DDX42-218ENST00000584261 FAM163AQ96GL9 167 aaPredicted RBP13.31□□□□□ -0.28
DDX42-218ENST00000584261 KIF12Q96FN5 646 aa13.29□□□□□ -0.28
DDX42-218ENST00000584261 SCUBE2Q9NQ36 999 aa13.28□□□□□ -0.28
DDX42-218ENST00000584261 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
DDX42-218ENST00000584261 PROM2Q8N271 834 aa13.25□□□□□ -0.29
DDX42-218ENST00000584261 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
DDX42-218ENST00000584261 TRPC6Q9Y210 931 aa13.25□□□□□ -0.29
DDX42-218ENST00000584261 MAP3K13O43283 966 aa13.2□□□□□ -0.3
DDX42-218ENST00000584261 TIE1P35590 1138 aa13.15□□□□□ -0.3
DDX42-218ENST00000584261 RASEFQ8IZ41 740 aa13.15□□□□□ -0.3
DDX42-218ENST00000584261 COLQQ9Y215 455 aaPredicted RBP13.14□□□□□ -0.31
DDX42-218ENST00000584261 MIER1Q8N108 512 aa13.13□□□□□ -0.31
DDX42-218ENST00000584261 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
DDX42-218ENST00000584261 SEC24BO95487 1268 aa13.1□□□□□ -0.31
DDX42-218ENST00000584261 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
DDX42-218ENST00000584261 TRIM35Q9UPQ4 493 aa13.02□□□□□ -0.33
DDX42-218ENST00000584261 CDAN1Q8IWY9 1227 aa13□□□□□ -0.33
DDX42-218ENST00000584261 PCDHB13Q9Y5F0 798 aa12.99□□□□□ -0.33
DDX42-218ENST00000584261 IER5LQ5T953 404 aa12.98□□□□□ -0.33
DDX42-218ENST00000584261 SGIP1Q9BQI5 828 aa12.97□□□□□ -0.33
DDX42-218ENST00000584261 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
DDX42-218ENST00000584261 SLAIN1Q8ND83 568 aa12.93□□□□□ -0.34
DDX42-218ENST00000584261 ST18O60284 1047 aa12.91□□□□□ -0.34
DDX42-218ENST00000584261 NUBP1P53384 320 aa12.91□□□□□ -0.34
DDX42-218ENST00000584261 IFNL1Q8IU54 200 aa12.91□□□□□ -0.34
DDX42-218ENST00000584261 TMEM106CQ9BVX2 250 aa12.88□□□□□ -0.35
DDX42-218ENST00000584261 CCDC180Q9P1Z9 1646 aa12.88□□□□□ -0.35
DDX42-218ENST00000584261 PLCG2P16885 1265 aa12.84□□□□□ -0.35
DDX42-218ENST00000584261 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
DDX42-218ENST00000584261 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
DDX42-218ENST00000584261 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
DDX42-218ENST00000584261 OCEL1Q9H607 264 aa12.74□□□□□ -0.37
DDX42-218ENST00000584261 ABCC9O60706 1549 aa12.72□□□□□ -0.37
DDX42-218ENST00000584261 MMRN1Q13201 1228 aa12.71□□□□□ -0.37
DDX42-218ENST00000584261 SPNS2Q8IVW8 549 aa12.7□□□□□ -0.38
DDX42-218ENST00000584261 TMEM121BQ9BXQ6 578 aaPredicted RBP12.69□□□□□ -0.38
DDX42-218ENST00000584261 PYGBP11216 843 aa12.68□□□□□ -0.38
DDX42-218ENST00000584261 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
DDX42-218ENST00000584261 MARVELD3Q96A59 401 aa12.67□□□□□ -0.38
DDX42-218ENST00000584261 SNPHO15079 494 aa12.66□□□□□ -0.38
DDX42-218ENST00000584261 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.66□□□□□ -0.38
DDX42-218ENST00000584261 PCDHB8Q9UN66 801 aa12.65□□□□□ -0.38
DDX42-218ENST00000584261 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
DDX42-218ENST00000584261 FKBP8Q14318 412 aa12.53□□□□□ -0.4
DDX42-218ENST00000584261 EMP3P54852 163 aa12.5□□□□□ -0.41
DDX42-218ENST00000584261 C3orf67Q6ZVT6 689 aa12.5□□□□□ -0.41
DDX42-218ENST00000584261 POTEB3A0JP26 581 aa12.47□□□□□ -0.41
DDX42-218ENST00000584261 MKRN3Q13064 507 aaKnown RBP12.47□□□□□ -0.41
DDX42-218ENST00000584261 POTEBQ6S5H4 581 aa12.47□□□□□ -0.41
DDX42-218ENST00000584261 L3MBTL3Q96JM7 780 aaPredicted RBP12.47□□□□□ -0.41
DDX42-218ENST00000584261 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
DDX42-218ENST00000584261 KRTAP3-3Q9BYR6 98 aa12.44□□□□□ -0.42
DDX42-218ENST00000584261 KRTAP3-2Q9BYR7 98 aa12.44□□□□□ -0.42
DDX42-218ENST00000584261 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
DDX42-218ENST00000584261 ZNF467Q7Z7K2 595 aaPredicted RBP12.43□□□□□ -0.42
DDX42-218ENST00000584261 HS3ST6Q96QI5 342 aa12.43□□□□□ -0.42
DDX42-218ENST00000584261 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.43□□□□□ -0.427e-13■□□□□ 10
DDX42-218ENST00000584261 GSE1Q14687 1217 aa12.39□□□□□ -0.43
DDX42-218ENST00000584261 PSEN1P49768 467 aa12.38□□□□□ -0.43
DDX42-218ENST00000584261 KLHL34Q8N239 644 aa12.37□□□□□ -0.43
DDX42-218ENST00000584261 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
DDX42-218ENST00000584261 CHRM1P11229 460 aaPredicted RBP12.36□□□□□ -0.43
DDX42-218ENST00000584261 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
DDX42-218ENST00000584261 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
DDX42-218ENST00000584261 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
DDX42-218ENST00000584261 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
DDX42-218ENST00000584261 VASPP50552 380 aaPredicted RBP12.27□□□□□ -0.45
DDX42-218ENST00000584261 PDAP1Q13442 181 aaKnown RBP12.25□□□□□ -0.45
DDX42-218ENST00000584261 BOLA1Q9Y3E2 137 aa12.25□□□□□ -0.45
DDX42-218ENST00000584261 CABP2Q9NPB3 220 aa12.23□□□□□ -0.45
DDX42-218ENST00000584261 G3V3G9 751 aa12.22□□□□□ -0.45
DDX42-218ENST00000584261 HOXB1P14653 301 aaPredicted RBP12.21□□□□□ -0.45
DDX42-218ENST00000584261 ZNF710Q8N1W2 664 aa12.2□□□□□ -0.46
DDX42-218ENST00000584261 RB1CC1Q8TDY2 1594 aa12.19□□□□□ -0.46
DDX42-218ENST00000584261 NACADO15069 1562 aa12.18□□□□□ -0.46
DDX42-218ENST00000584261 ERBB3P21860 1342 aa12.18□□□□□ -0.46
DDX42-218ENST00000584261 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
DDX42-218ENST00000584261 ZCCHC6Q5VYS8 1495 aaKnown RBP12.14□□□□□ -0.47
DDX42-218ENST00000584261 CIZ1Q9ULV3 898 aaPredicted RBP12.12□□□□□ -0.47
DDX42-218ENST00000584261 MYO15BQ96JP2 1530 aa12.11□□□□□ -0.47
DDX42-218ENST00000584261 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
DDX42-218ENST00000584261 VARS2Q5ST30 1063 aaKnown RBP12.09□□□□□ -0.47
DDX42-218ENST00000584261 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
DDX42-218ENST00000584261 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
DDX42-218ENST00000584261 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
DDX42-218ENST00000584261 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
DDX42-218ENST00000584261 EFCAB3Q8N7B9 438 aa12.04□□□□□ -0.48
DDX42-218ENST00000584261 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms