RNA–Protein interactions for RNA: ENST00000579385.1

AP001099.1-201, humanhuman

TSL 5 BASIC

Gene AP001099.1, Length 855 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001099.1-201ENST00000579385 MIER1Q8N108 512 aa17.71■□□□□ 0.43
AP001099.1-201ENST00000579385 AKT1S1Q96B36 256 aa17.67■□□□□ 0.42
AP001099.1-201ENST00000579385 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
AP001099.1-201ENST00000579385 SLC24A1O60721 1099 aa17.6■□□□□ 0.41
AP001099.1-201ENST00000579385 PLEKHG5O94827 1062 aa17.6■□□□□ 0.41
AP001099.1-201ENST00000579385 SPDYE1Q8NFV5 336 aaPredicted RBP17.57■□□□□ 0.4
AP001099.1-201ENST00000579385 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
AP001099.1-201ENST00000579385 ZBTB47Q9UFB7 747 aaPredicted RBP17.5■□□□□ 0.39
AP001099.1-201ENST00000579385 PKD2Q13563 968 aa17.49■□□□□ 0.39
AP001099.1-201ENST00000579385 CLEC11AQ9Y240 323 aa17.48■□□□□ 0.39
AP001099.1-201ENST00000579385 CFTRP13569 1480 aa17.44■□□□□ 0.38
AP001099.1-201ENST00000579385 PRR29P0C7W0 189 aa17.4■□□□□ 0.38
AP001099.1-201ENST00000579385 CADPSQ9ULU8 1353 aa17.4■□□□□ 0.38
AP001099.1-201ENST00000579385 ECM2O94769 699 aaPredicted RBP17.33■□□□□ 0.36
AP001099.1-201ENST00000579385 ABCC8Q09428 1581 aa17.32■□□□□ 0.36
AP001099.1-201ENST00000579385 PRDM2Q13029 1718 aa17.3■□□□□ 0.36
AP001099.1-201ENST00000579385 NESP48681 1621 aa17.3■□□□□ 0.36
AP001099.1-201ENST00000579385 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
AP001099.1-201ENST00000579385 CIZ1Q9ULV3 898 aaPredicted RBP17.28■□□□□ 0.36
AP001099.1-201ENST00000579385 PITPNM1O00562 1244 aa17.27■□□□□ 0.36
AP001099.1-201ENST00000579385 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
AP001099.1-201ENST00000579385 WRNQ14191 1432 aaPredicted RBP eCLIP17.23■□□□□ 0.35
AP001099.1-201ENST00000579385 FANCD2Q9BXW9 1451 aa17.21■□□□□ 0.35
AP001099.1-201ENST00000579385 SYNJ1O43426 1573 aa17.19■□□□□ 0.34
AP001099.1-201ENST00000579385 TRIM41Q8WV44 630 aa17.19■□□□□ 0.34
AP001099.1-201ENST00000579385 NUBP1P53384 320 aa17.15■□□□□ 0.34
AP001099.1-201ENST00000579385 PDS5BQ9NTI5 1447 aa17.14■□□□□ 0.33
AP001099.1-201ENST00000579385 GSE1Q14687 1217 aa17.14■□□□□ 0.33
AP001099.1-201ENST00000579385 CUX1P39880 1505 aa17.14■□□□□ 0.33
AP001099.1-201ENST00000579385 TOP2BQ02880 1626 aa17.13■□□□□ 0.33
AP001099.1-201ENST00000579385 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
AP001099.1-201ENST00000579385 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
AP001099.1-201ENST00000579385 MNX1P50219 401 aaPredicted RBP17.12■□□□□ 0.33
AP001099.1-201ENST00000579385 RGL2O15211 777 aa17.11■□□□□ 0.33
AP001099.1-201ENST00000579385 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
AP001099.1-201ENST00000579385 KIF21AQ7Z4S6 1674 aa17.07■□□□□ 0.32
AP001099.1-201ENST00000579385 DNMBPQ6XZF7 1577 aa17.05■□□□□ 0.32
AP001099.1-201ENST00000579385 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
AP001099.1-201ENST00000579385 URB2Q14146 1524 aaKnown RBP17.03■□□□□ 0.32
AP001099.1-201ENST00000579385 PLCB2Q00722 1185 aa17.03■□□□□ 0.32
AP001099.1-201ENST00000579385 FAM212AQ96EL1 285 aa17.02■□□□□ 0.32
AP001099.1-201ENST00000579385 TOPBP1Q92547 1522 aa17.01■□□□□ 0.31
AP001099.1-201ENST00000579385 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
AP001099.1-201ENST00000579385 CHADLQ6NUI6 762 aa16.97■□□□□ 0.31
AP001099.1-201ENST00000579385 FGD5Q6ZNL6 1462 aa16.97■□□□□ 0.31
AP001099.1-201ENST00000579385 RASEFQ8IZ41 740 aa16.95■□□□□ 0.3
AP001099.1-201ENST00000579385 SOGA1O94964 1423 aa16.95■□□□□ 0.3
AP001099.1-201ENST00000579385 ERCC6Q03468 1493 aa16.94■□□□□ 0.3
AP001099.1-201ENST00000579385 BBXQ8WY36 941 aaPredicted RBP16.94■□□□□ 0.3
AP001099.1-201ENST00000579385 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
AP001099.1-201ENST00000579385 WDR62O43379 1518 aa16.91■□□□□ 0.3
AP001099.1-201ENST00000579385 THOC2Q8NI27 1593 aaKnown RBP16.91■□□□□ 0.3
AP001099.1-201ENST00000579385 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.91■□□□□ 0.3
AP001099.1-201ENST00000579385 EEA1Q15075 1411 aa16.9■□□□□ 0.3
AP001099.1-201ENST00000579385 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
AP001099.1-201ENST00000579385 PRKAR2AP13861 404 aaKnown RBP16.87■□□□□ 0.29
AP001099.1-201ENST00000579385 FARP1Q9Y4F1 1045 aaPredicted RBP16.87■□□□□ 0.29
AP001099.1-201ENST00000579385 CHGAP10645 457 aaKnown RBP16.86■□□□□ 0.29
AP001099.1-201ENST00000579385 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
AP001099.1-201ENST00000579385 FXR2P51116 673 aaKnown RBP eCLIP16.85■□□□□ 0.29
AP001099.1-201ENST00000579385 RNF25Q96BH1 459 aaPredicted RBP16.84■□□□□ 0.29
AP001099.1-201ENST00000579385 RAD54L2Q9Y4B4 1467 aa16.84■□□□□ 0.29
AP001099.1-201ENST00000579385 CHRM1P11229 460 aaPredicted RBP16.83■□□□□ 0.28
AP001099.1-201ENST00000579385 ABCA10Q8WWZ4 1543 aa16.83■□□□□ 0.28
AP001099.1-201ENST00000579385 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
AP001099.1-201ENST00000579385 TAOK2Q9UL54 1235 aa16.82■□□□□ 0.28
AP001099.1-201ENST00000579385 CUX2O14529 1486 aa16.81■□□□□ 0.28
AP001099.1-201ENST00000579385 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
AP001099.1-201ENST00000579385 WDR97A6NE52 1622 aa16.81■□□□□ 0.28
AP001099.1-201ENST00000579385 KIF27Q86VH2 1401 aa16.8■□□□□ 0.28
AP001099.1-201ENST00000579385 RIOK3O14730 519 aaKnown RBP16.8■□□□□ 0.28
AP001099.1-201ENST00000579385 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
AP001099.1-201ENST00000579385 PYGBP11216 843 aa16.76■□□□□ 0.27
AP001099.1-201ENST00000579385 PAXIP1Q6ZW49 1069 aaPredicted RBP16.76■□□□□ 0.27
AP001099.1-201ENST00000579385 TSPYL2Q9H2G4 693 aaPredicted RBP16.76■□□□□ 0.27
AP001099.1-201ENST00000579385 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
AP001099.1-201ENST00000579385 HS6ST3Q8IZP7 471 aa16.74■□□□□ 0.27
AP001099.1-201ENST00000579385 CFAP44Q96MT7 982 aa16.73■□□□□ 0.27
AP001099.1-201ENST00000579385 ABCA5Q8WWZ7 1642 aa16.72■□□□□ 0.27
AP001099.1-201ENST00000579385 PIP4P2Q8N4L2 257 aa16.71■□□□□ 0.27
AP001099.1-201ENST00000579385 KIF21BO75037 1637 aa16.7■□□□□ 0.26
AP001099.1-201ENST00000579385 LOC105371045A0A1W2PR82 267 aa16.7■□□□□ 0.26
AP001099.1-201ENST00000579385 VGFO15240 615 aaPredicted RBP16.7■□□□□ 0.26
AP001099.1-201ENST00000579385 SPRYD3Q8NCJ5 442 aa16.7■□□□□ 0.26
AP001099.1-201ENST00000579385 PRXQ9BXM0 1461 aa16.68■□□□□ 0.26
AP001099.1-201ENST00000579385 IGF1RP08069 1367 aa16.66■□□□□ 0.26
AP001099.1-201ENST00000579385 TDRD9Q8NDG6 1382 aaKnown RBP16.66■□□□□ 0.26
AP001099.1-201ENST00000579385 GOLGA3Q08378 1498 aa16.66■□□□□ 0.26
AP001099.1-201ENST00000579385 GAPVD1Q14C86 1478 aa16.65■□□□□ 0.26
AP001099.1-201ENST00000579385 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
AP001099.1-201ENST00000579385 ERICH3Q5RHP9 1530 aa16.63■□□□□ 0.25
AP001099.1-201ENST00000579385 RAPGEF2Q9Y4G8 1499 aa16.62■□□□□ 0.25
AP001099.1-201ENST00000579385 STK25O00506 426 aa16.62■□□□□ 0.25
AP001099.1-201ENST00000579385 PAK3O75914 559 aaPredicted RBP16.61■□□□□ 0.25
AP001099.1-201ENST00000579385 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
AP001099.1-201ENST00000579385 EIF4G3O43432 1585 aaKnown RBP16.6■□□□□ 0.25
AP001099.1-201ENST00000579385 SGIP1Q9BQI5 828 aa16.6■□□□□ 0.25
AP001099.1-201ENST00000579385 AQRO60306 1485 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP001099.1-201ENST00000579385 CUL7Q14999 1698 aa16.58■□□□□ 0.24
AP001099.1-201ENST00000579385 PBRM1Q86U86 1689 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms