RNA–Protein interactions for RNA: ENST00000573919.1

RNF213-217, Transcript of ring finger protein 213, humanhuman

TSL 3

Gene RNF213, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-217ENST00000573919 NESP48681 1621 aa16.39■□□□□ 0.21
RNF213-217ENST00000573919 CADPSQ9ULU8 1353 aa16.37■□□□□ 0.21
RNF213-217ENST00000573919 PRR29P0C7W0 189 aa16.34■□□□□ 0.21
RNF213-217ENST00000573919 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
RNF213-217ENST00000573919 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
RNF213-217ENST00000573919 VASPP50552 380 aaPredicted RBP16.33■□□□□ 0.2
RNF213-217ENST00000573919 KIF21AQ7Z4S6 1674 aa16.33■□□□□ 0.2
RNF213-217ENST00000573919 CFTRP13569 1480 aa16.32■□□□□ 0.2
RNF213-217ENST00000573919 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
RNF213-217ENST00000573919 CHRDL2Q6WN34 429 aa16.28■□□□□ 0.2
RNF213-217ENST00000573919 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
RNF213-217ENST00000573919 CEP164Q9UPV0 1460 aa16.24■□□□□ 0.19
RNF213-217ENST00000573919 FANCD2Q9BXW9 1451 aa16.22■□□□□ 0.19
RNF213-217ENST00000573919 PLEKHG5O94827 1062 aa16.22■□□□□ 0.19
RNF213-217ENST00000573919 MIER1Q8N108 512 aa16.21■□□□□ 0.19
RNF213-217ENST00000573919 PLCD3Q8N3E9 789 aa16.21■□□□□ 0.19
RNF213-217ENST00000573919 CUX2O14529 1486 aa16.21■□□□□ 0.19
RNF213-217ENST00000573919 MRC2Q9UBG0 1479 aa16.18■□□□□ 0.18
RNF213-217ENST00000573919 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.171e-7■■■■□ 21.6
RNF213-217ENST00000573919 WDR62O43379 1518 aa16.14■□□□□ 0.17
RNF213-217ENST00000573919 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
RNF213-217ENST00000573919 CREBZFQ9NS37 354 aa16.11■□□□□ 0.17
RNF213-217ENST00000573919 IFNLR1Q8IU57 520 aaPredicted RBP16.07■□□□□ 0.16
RNF213-217ENST00000573919 PIP4P2Q8N4L2 257 aa16.06■□□□□ 0.16
RNF213-217ENST00000573919 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
RNF213-217ENST00000573919 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
RNF213-217ENST00000573919 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
RNF213-217ENST00000573919 URB2Q14146 1524 aaKnown RBP16.03■□□□□ 0.16
RNF213-217ENST00000573919 DNMBPQ6XZF7 1577 aa16.02■□□□□ 0.16
RNF213-217ENST00000573919 CHADLQ6NUI6 762 aa15.99■□□□□ 0.15
RNF213-217ENST00000573919 TOPBP1Q92547 1522 aa15.98■□□□□ 0.15
RNF213-217ENST00000573919 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
RNF213-217ENST00000573919 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
RNF213-217ENST00000573919 SPOCK2Q92563 424 aa15.93■□□□□ 0.14
RNF213-217ENST00000573919 FARP1Q9Y4F1 1045 aaPredicted RBP15.92■□□□□ 0.14
RNF213-217ENST00000573919 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
RNF213-217ENST00000573919 CUX1P39880 1505 aa15.88■□□□□ 0.13
RNF213-217ENST00000573919 BIVM-ERCC5R4GMW8 1640 aa15.86■□□□□ 0.13
RNF213-217ENST00000573919 POLA1P09884 1462 aaPredicted RBP15.84■□□□□ 0.13
RNF213-217ENST00000573919 TOP2BQ02880 1626 aa15.83■□□□□ 0.12
RNF213-217ENST00000573919 WRNQ14191 1432 aaPredicted RBP eCLIP15.82■□□□□ 0.12
RNF213-217ENST00000573919 FGD5Q6ZNL6 1462 aa15.82■□□□□ 0.12
RNF213-217ENST00000573919 WDR97A6NE52 1622 aa15.82■□□□□ 0.12
RNF213-217ENST00000573919 TARBP1Q13395 1621 aaKnown RBP15.81■□□□□ 0.12
RNF213-217ENST00000573919 AMER1Q5JTC6 1135 aaPredicted RBP15.81■□□□□ 0.12
RNF213-217ENST00000573919 SYNJ1O43426 1573 aa15.79■□□□□ 0.12
RNF213-217ENST00000573919 NUBP1P53384 320 aa15.78■□□□□ 0.12
RNF213-217ENST00000573919 EIF4G3O43432 1585 aaKnown RBP15.78■□□□□ 0.12
RNF213-217ENST00000573919 SOGA1O94964 1423 aa15.74■□□□□ 0.11
RNF213-217ENST00000573919 FAM212AQ96EL1 285 aa15.71■□□□□ 0.11
RNF213-217ENST00000573919 ZNF608Q9ULD9 1512 aaPredicted RBP15.71■□□□□ 0.11
RNF213-217ENST00000573919 GSE1Q14687 1217 aa15.7■□□□□ 0.1
RNF213-217ENST00000573919 RAD54L2Q9Y4B4 1467 aa15.7■□□□□ 0.1
RNF213-217ENST00000573919 ABCA10Q8WWZ4 1543 aa15.69■□□□□ 0.1
RNF213-217ENST00000573919 POTEHQ6S545 545 aa15.69■□□□□ 0.1
RNF213-217ENST00000573919 RASEFQ8IZ41 740 aa15.68■□□□□ 0.1
RNF213-217ENST00000573919 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
RNF213-217ENST00000573919 ABCA5Q8WWZ7 1642 aa15.66■□□□□ 0.1
RNF213-217ENST00000573919 PAK3O75914 559 aaPredicted RBP15.66■□□□□ 0.1
RNF213-217ENST00000573919 RTN4Q9NQC3 1192 aaKnown RBP15.65■□□□□ 0.1
RNF213-217ENST00000573919 CIZ1Q9ULV3 898 aaPredicted RBP15.64■□□□□ 0.09
RNF213-217ENST00000573919 DCAF8Q5TAQ9 597 aa15.63■□□□□ 0.09
RNF213-217ENST00000573919 AQRO60306 1485 aaKnown RBP eCLIP15.61■□□□□ 0.092e-11■■■■■ 50.6
RNF213-217ENST00000573919 GRIN2BQ13224 1484 aa15.61■□□□□ 0.09
RNF213-217ENST00000573919 GAPVD1Q14C86 1478 aa15.6■□□□□ 0.09
RNF213-217ENST00000573919 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
RNF213-217ENST00000573919 TDRD9Q8NDG6 1382 aaKnown RBP15.6■□□□□ 0.09
RNF213-217ENST00000573919 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
RNF213-217ENST00000573919 C19orf67A6NJJ6 358 aa15.59■□□□□ 0.09
RNF213-217ENST00000573919 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
RNF213-217ENST00000573919 CHD1O14646 1710 aa15.57■□□□□ 0.08
RNF213-217ENST00000573919 TSPYL2Q9H2G4 693 aaPredicted RBP15.57■□□□□ 0.08
RNF213-217ENST00000573919 SNAPC4Q5SXM2 1469 aa15.56■□□□□ 0.08
RNF213-217ENST00000573919 PKD2Q13563 968 aa15.55■□□□□ 0.08
RNF213-217ENST00000573919 ERICH3Q5RHP9 1530 aa15.54■□□□□ 0.08
RNF213-217ENST00000573919 HAX1O00165 279 aa15.54■□□□□ 0.08
RNF213-217ENST00000573919 ADAMTS12P58397 1594 aa15.52■□□□□ 0.07
RNF213-217ENST00000573919 KIF27Q86VH2 1401 aa15.51■□□□□ 0.07
RNF213-217ENST00000573919 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
RNF213-217ENST00000573919 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
RNF213-217ENST00000573919 CCDC61Q9Y6R9 512 aa15.49■□□□□ 0.07
RNF213-217ENST00000573919 CUL7Q14999 1698 aa15.48■□□□□ 0.07
RNF213-217ENST00000573919 ECM2O94769 699 aaPredicted RBP15.48■□□□□ 0.07
RNF213-217ENST00000573919 CHRM1P11229 460 aaPredicted RBP15.46■□□□□ 0.07
RNF213-217ENST00000573919 FHAD1B1AJZ9 1412 aa15.43■□□□□ 0.06
RNF213-217ENST00000573919 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
RNF213-217ENST00000573919 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
RNF213-217ENST00000573919 GRIN2AQ12879 1464 aa15.4■□□□□ 0.06
RNF213-217ENST00000573919 CHMP7Q8WUX9 453 aaPredicted RBP15.4■□□□□ 0.06
RNF213-217ENST00000573919 PYGBP11216 843 aa15.39■□□□□ 0.05
RNF213-217ENST00000573919 CLASP1Q7Z460 1538 aa15.36■□□□□ 0.05
RNF213-217ENST00000573919 CLCN6P51797 869 aa15.35■□□□□ 0.05
RNF213-217ENST00000573919 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
RNF213-217ENST00000573919 KIF12Q96FN5 646 aa15.33■□□□□ 0.04
RNF213-217ENST00000573919 PHF12Q96QT6 1004 aa15.33■□□□□ 0.04
RNF213-217ENST00000573919 EEA1Q15075 1411 aa15.33■□□□□ 0.04
RNF213-217ENST00000573919 EVX2Q03828 476 aa15.32■□□□□ 0.04
RNF213-217ENST00000573919 IGF1RP08069 1367 aa15.32■□□□□ 0.04
RNF213-217ENST00000573919 CEP170Q5SW79 1584 aa15.32■□□□□ 0.04
RNF213-217ENST00000573919 NUP160Q12769 1436 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms