RNA–Protein interactions for RNA: ENST00000568530.5

PDPR-210, Transcript of pyruvate dehydrogenase phosphatase regulatory subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDPR, Length 7,223 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPR-210ENST00000568530 HIRIP3Q9BW71 556 aaPredicted RBP11.39□□□□□ -0.59
PDPR-210ENST00000568530 FAM9BQ8IZU0 186 aa11.38□□□□□ -0.59
PDPR-210ENST00000568530 PDE4CQ08493 712 aa11.36□□□□□ -0.59
PDPR-210ENST00000568530 ANP32AP39687 249 aaKnown RBP11.35□□□□□ -0.59
PDPR-210ENST00000568530 DDX10Q13206 875 aaKnown RBP11.35□□□□□ -0.59
PDPR-210ENST00000568530 PPM1GO15355 546 aaPredicted RBP11.33□□□□□ -0.59
PDPR-210ENST00000568530 GOLGA2Q08379 1002 aa11.32□□□□□ -0.6
PDPR-210ENST00000568530 NAP1L2Q9ULW6 460 aaPredicted RBP11.32□□□□□ -0.6
PDPR-210ENST00000568530 UPF2Q9HAU5 1272 aaKnown RBP11.31□□□□□ -0.6
PDPR-210ENST00000568530 HNRNPUQ00839 825 aaKnown RBP eCLIP11.3□□□□□ -0.6
PDPR-210ENST00000568530 AEBP2Q6ZN18 517 aaPredicted RBP11.3□□□□□ -0.6
PDPR-210ENST00000568530 KDM2AQ9Y2K7 1162 aa11.29□□□□□ -0.6
PDPR-210ENST00000568530 CCDC9Q9Y3X0 531 aaKnown RBP11.29□□□□□ -0.6
PDPR-210ENST00000568530 PHF23Q9BUL5 403 aaPredicted RBP11.29□□□□□ -0.6
PDPR-210ENST00000568530 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
PDPR-210ENST00000568530 MYH16Q9H6N6 1097 aa11.26□□□□□ -0.61
PDPR-210ENST00000568530 ZRSR1Q15695 479 aaKnown RBP11.25□□□□□ -0.61
PDPR-210ENST00000568530 LAS1LQ9Y4W2 734 aaKnown RBP11.25□□□□□ -0.61
PDPR-210ENST00000568530 MYO15BQ96JP2 1530 aa11.25□□□□□ -0.61
PDPR-210ENST00000568530 SOX12O15370 315 aa11.24□□□□□ -0.61
PDPR-210ENST00000568530 NCLP19338 710 aaKnown RBP11.24□□□□□ -0.61
PDPR-210ENST00000568530 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
PDPR-210ENST00000568530 TMC1Q8TDI8 760 aa11.23□□□□□ -0.61
PDPR-210ENST00000568530 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
PDPR-210ENST00000568530 ZNF330Q9Y3S2 320 aaPredicted RBP11.22□□□□□ -0.61
PDPR-210ENST00000568530 MIER1Q8N108 512 aa11.21□□□□□ -0.61
PDPR-210ENST00000568530 WWC1Q8IX03 1113 aa11.2□□□□□ -0.62
PDPR-210ENST00000568530 TONSLQ96HA7 1378 aa11.2□□□□□ -0.62
PDPR-210ENST00000568530 WDR43Q15061 677 aaKnown RBP eCLIP11.19□□□□□ -0.62
PDPR-210ENST00000568530 MLECQ14165 292 aa11.18□□□□□ -0.62
PDPR-210ENST00000568530 PLCB2Q00722 1185 aa11.18□□□□□ -0.62
PDPR-210ENST00000568530 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
PDPR-210ENST00000568530 G3V3G9 751 aa11.15□□□□□ -0.62
PDPR-210ENST00000568530 DCAF8Q5TAQ9 597 aa11.15□□□□□ -0.62
PDPR-210ENST00000568530 OS9Q13438 667 aaPredicted RBP11.15□□□□□ -0.63
PDPR-210ENST00000568530 CNKSR2Q8WXI2 1034 aa11.14□□□□□ -0.63
PDPR-210ENST00000568530 TRIM44Q96DX7 344 aaPredicted RBP11.14□□□□□ -0.63
PDPR-210ENST00000568530 CCDC136Q96JN2 1154 aa11.14□□□□□ -0.63
PDPR-210ENST00000568530 FGD1P98174 961 aa11.14□□□□□ -0.63
PDPR-210ENST00000568530 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
PDPR-210ENST00000568530 TMX4Q9H1E5 349 aaPredicted RBP11.13□□□□□ -0.63
PDPR-210ENST00000568530 MSH5O43196 834 aa11.13□□□□□ -0.63
PDPR-210ENST00000568530 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.12□□□□□ -0.63
PDPR-210ENST00000568530 DNTTIP2Q5QJE6 756 aaKnown RBP11.11□□□□□ -0.63
PDPR-210ENST00000568530 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
PDPR-210ENST00000568530 TNNT2P45379 298 aaPredicted RBP11.08□□□□□ -0.64
PDPR-210ENST00000568530 DCAF1Q9Y4B6 1507 aa11.08□□□□□ -0.64
PDPR-210ENST00000568530 RTN4Q9NQC3 1192 aaKnown RBP11.08□□□□□ -0.64
PDPR-210ENST00000568530 MRS2Q9HD23 443 aa11.07□□□□□ -0.64
PDPR-210ENST00000568530 NEUROD2Q15784 382 aa11.07□□□□□ -0.64
PDPR-210ENST00000568530 RRP7BPQ9NSQ0 103 aa11.07□□□□□ -0.64
PDPR-210ENST00000568530 VPS53Q5VIR6 699 aa11.06□□□□□ -0.64
PDPR-210ENST00000568530 KCNJ4P48050 445 aa11.06□□□□□ -0.64
PDPR-210ENST00000568530 DCAF8L1A6NGE4 600 aa11.05□□□□□ -0.64
PDPR-210ENST00000568530 RGL3Q3MIN7 710 aa11.03□□□□□ -0.64
PDPR-210ENST00000568530 NOC3LQ8WTT2 800 aaKnown RBP11.03□□□□□ -0.64
PDPR-210ENST00000568530 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
PDPR-210ENST00000568530 MEX3CQ5U5Q3 659 aaKnown RBP11.01□□□□□ -0.65
PDPR-210ENST00000568530 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
PDPR-210ENST00000568530 SUPT16HQ9Y5B9 1047 aaKnown RBP11□□□□□ -0.65
PDPR-210ENST00000568530 CASC1Q6TDU7 716 aa10.99□□□□□ -0.65
PDPR-210ENST00000568530 GNL2Q13823 731 aaKnown RBP10.99□□□□□ -0.65
PDPR-210ENST00000568530 GLIPR1L2Q4G1C9 344 aa10.99□□□□□ -0.65
PDPR-210ENST00000568530 CWC22Q9HCG8 908 aaKnown RBP10.99□□□□□ -0.65
PDPR-210ENST00000568530 RAD21O60216 631 aa10.98□□□□□ -0.65
PDPR-210ENST00000568530 POGKQ9P215 609 aa10.98□□□□□ -0.65
PDPR-210ENST00000568530 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
PDPR-210ENST00000568530 CCDC180Q9P1Z9 1646 aa10.97□□□□□ -0.65
PDPR-210ENST00000568530 CREBRFQ8IUR6 639 aa10.97□□□□□ -0.65
PDPR-210ENST00000568530 SAFB2Q14151 953 aaKnown RBP eCLIP10.96□□□□□ -0.66
PDPR-210ENST00000568530 PNNQ9H307 717 aaKnown RBP10.95□□□□□ -0.66
PDPR-210ENST00000568530 FTSJ3Q8IY81 847 aaKnown RBP10.95□□□□□ -0.66
PDPR-210ENST00000568530 SAMD1Q6SPF0 538 aaPredicted RBP10.95□□□□□ -0.66
PDPR-210ENST00000568530 PPP1R1BQ9UD71 204 aaPredicted RBP10.94□□□□□ -0.66
PDPR-210ENST00000568530 CHMP3Q9Y3E7 222 aa10.94□□□□□ -0.66
PDPR-210ENST00000568530 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
PDPR-210ENST00000568530 WDR70Q9NW82 654 aa10.93□□□□□ -0.66
PDPR-210ENST00000568530 APBB1O00213 710 aa10.92□□□□□ -0.66
PDPR-210ENST00000568530 KIAA2012Q0VF49 1180 aa10.92□□□□□ -0.66
PDPR-210ENST00000568530 MTUS2Q5JR59 1369 aa10.92□□□□□ -0.66
PDPR-210ENST00000568530 A0A0U1RQG5 324 aaPredicted RBP10.92□□□□□ -0.66
PDPR-210ENST00000568530 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
PDPR-210ENST00000568530 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
PDPR-210ENST00000568530 ZCCHC6Q5VYS8 1495 aaKnown RBP10.91□□□□□ -0.66
PDPR-210ENST00000568530 U2SURPO15042 1029 aaKnown RBP10.91□□□□□ -0.66
PDPR-210ENST00000568530 VSIG10Q8N0Z9 540 aa10.91□□□□□ -0.66
PDPR-210ENST00000568530 EIF4G2P78344 907 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDPR-210ENST00000568530 SPRYD3Q8NCJ5 442 aa10.9□□□□□ -0.66
PDPR-210ENST00000568530 SIN3AQ96ST3 1273 aa10.9□□□□□ -0.66
PDPR-210ENST00000568530 DRC7Q8IY82 874 aa10.9□□□□□ -0.66
PDPR-210ENST00000568530 CC2D1BQ5T0F9 858 aaKnown RBP10.9□□□□□ -0.67
PDPR-210ENST00000568530 GOLGA6L22H0YM25 854 aa10.89□□□□□ -0.67
PDPR-210ENST00000568530 FRAT2O75474 233 aaPredicted RBP10.89□□□□□ -0.67
PDPR-210ENST00000568530 GOLGA6L6A8MZA4 724 aa10.89□□□□□ -0.67
PDPR-210ENST00000568530 FRAT1Q92837 279 aaPredicted RBP10.88□□□□□ -0.67
PDPR-210ENST00000568530 GTF2E1P29083 439 aaPredicted RBP10.88□□□□□ -0.67
PDPR-210ENST00000568530 CLIP1P30622 1438 aa10.88□□□□□ -0.67
PDPR-210ENST00000568530 B4GALNT3Q6L9W6 998 aa10.87□□□□□ -0.67
PDPR-210ENST00000568530 MAPK8IP3Q9UPT6 1336 aa10.87□□□□□ -0.67
PDPR-210ENST00000568530 GOLGA6L4A6NEF3 574 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms