RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 KLHL34Q8N239 644 aa17.06■□□□□ 0.32
CFDP1-206ENST00000566254 PEG3Q9GZU2 1588 aa17.04■□□□□ 0.32
CFDP1-206ENST00000566254 PLCD3Q8N3E9 789 aa17.04■□□□□ 0.32
CFDP1-206ENST00000566254 SPOCK2Q92563 424 aa17.04■□□□□ 0.32
CFDP1-206ENST00000566254 PKD2Q13563 968 aa17.03■□□□□ 0.32
CFDP1-206ENST00000566254 MIER1Q8N108 512 aa17■□□□□ 0.31
CFDP1-206ENST00000566254 MRC2Q9UBG0 1479 aa16.96■□□□□ 0.31
CFDP1-206ENST00000566254 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
CFDP1-206ENST00000566254 CADPSQ9ULU8 1353 aa16.93■□□□□ 0.3
CFDP1-206ENST00000566254 WDR62O43379 1518 aa16.92■□□□□ 0.3
CFDP1-206ENST00000566254 RBM42Q9BTD8 480 aaKnown RBP16.92■□□□□ 0.3
CFDP1-206ENST00000566254 AKT1S1Q96B36 256 aa16.85■□□□□ 0.29
CFDP1-206ENST00000566254 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
CFDP1-206ENST00000566254 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
CFDP1-206ENST00000566254 ZBTB47Q9UFB7 747 aaPredicted RBP16.8■□□□□ 0.28
CFDP1-206ENST00000566254 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
CFDP1-206ENST00000566254 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
CFDP1-206ENST00000566254 FANCD2Q9BXW9 1451 aa16.76■□□□□ 0.27
CFDP1-206ENST00000566254 WIZO95785 1651 aa16.72■□□□□ 0.27
CFDP1-206ENST00000566254 PLCB2Q00722 1185 aa16.7■□□□□ 0.26
CFDP1-206ENST00000566254 REM2Q8IYK8 340 aaPredicted RBP16.7■□□□□ 0.26
CFDP1-206ENST00000566254 RIMBP3CA6NJZ7 1639 aa16.67■□□□□ 0.26
CFDP1-206ENST00000566254 RIMBP3BA6NNM3 1639 aa16.67■□□□□ 0.26
CFDP1-206ENST00000566254 RIMBP3Q9UFD9 1639 aa16.67■□□□□ 0.26
CFDP1-206ENST00000566254 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
CFDP1-206ENST00000566254 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
CFDP1-206ENST00000566254 CIZ1Q9ULV3 898 aaPredicted RBP16.65■□□□□ 0.26
CFDP1-206ENST00000566254 CFTRP13569 1480 aa16.65■□□□□ 0.26
CFDP1-206ENST00000566254 RGL2O15211 777 aa16.62■□□□□ 0.25
CFDP1-206ENST00000566254 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
CFDP1-206ENST00000566254 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
CFDP1-206ENST00000566254 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
CFDP1-206ENST00000566254 NUBP1P53384 320 aa16.54■□□□□ 0.24
CFDP1-206ENST00000566254 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
CFDP1-206ENST00000566254 NPM1P06748 294 aaKnown RBP eCLIP16.52■□□□□ 0.24
CFDP1-206ENST00000566254 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
CFDP1-206ENST00000566254 PITPNM1O00562 1244 aa16.5■□□□□ 0.23
CFDP1-206ENST00000566254 MNX1P50219 401 aaPredicted RBP16.5■□□□□ 0.23
CFDP1-206ENST00000566254 GSE1Q14687 1217 aa16.49■□□□□ 0.23
CFDP1-206ENST00000566254 BBXQ8WY36 941 aaPredicted RBP16.49■□□□□ 0.23
CFDP1-206ENST00000566254 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
CFDP1-206ENST00000566254 TOP2AP11388 1531 aaKnown RBP16.46■□□□□ 0.23
CFDP1-206ENST00000566254 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
CFDP1-206ENST00000566254 HAP1P54257 671 aaPredicted RBP16.43■□□□□ 0.22
CFDP1-206ENST00000566254 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
CFDP1-206ENST00000566254 DCAF8Q5TAQ9 597 aa16.41■□□□□ 0.22
CFDP1-206ENST00000566254 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
CFDP1-206ENST00000566254 EIF4G3O43432 1585 aaKnown RBP16.39■□□□□ 0.21
CFDP1-206ENST00000566254 TOPBP1Q92547 1522 aa16.39■□□□□ 0.21
CFDP1-206ENST00000566254 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
CFDP1-206ENST00000566254 FAM212AQ96EL1 285 aa16.36■□□□□ 0.21
CFDP1-206ENST00000566254 CHGAP10645 457 aaKnown RBP16.34■□□□□ 0.21
CFDP1-206ENST00000566254 RNF25Q96BH1 459 aaPredicted RBP16.34■□□□□ 0.21
CFDP1-206ENST00000566254 CHD1O14646 1710 aa16.33■□□□□ 0.21
CFDP1-206ENST00000566254 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.26e-9■□□□□ 11.2
CFDP1-206ENST00000566254 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
CFDP1-206ENST00000566254 PAXIP1Q6ZW49 1069 aaPredicted RBP16.31■□□□□ 0.2
CFDP1-206ENST00000566254 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
CFDP1-206ENST00000566254 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
CFDP1-206ENST00000566254 DNMBPQ6XZF7 1577 aa16.26■□□□□ 0.19
CFDP1-206ENST00000566254 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
CFDP1-206ENST00000566254 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
CFDP1-206ENST00000566254 HS6ST3Q8IZP7 471 aa16.25■□□□□ 0.19
CFDP1-206ENST00000566254 RIOK3O14730 519 aaKnown RBP16.24■□□□□ 0.19
CFDP1-206ENST00000566254 CHRM1P11229 460 aaPredicted RBP16.23■□□□□ 0.19
CFDP1-206ENST00000566254 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
CFDP1-206ENST00000566254 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
CFDP1-206ENST00000566254 CHADLQ6NUI6 762 aa16.21■□□□□ 0.19
CFDP1-206ENST00000566254 POLA1P09884 1462 aaPredicted RBP16.19■□□□□ 0.18
CFDP1-206ENST00000566254 TAOK2Q9UL54 1235 aa16.18■□□□□ 0.18
CFDP1-206ENST00000566254 RAD54L2Q9Y4B4 1467 aa16.16■□□□□ 0.18
CFDP1-206ENST00000566254 TDRD9Q8NDG6 1382 aaKnown RBP16.16■□□□□ 0.18
CFDP1-206ENST00000566254 CLASP1Q7Z460 1538 aa16.15■□□□□ 0.18
CFDP1-206ENST00000566254 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
CFDP1-206ENST00000566254 FARP1Q9Y4F1 1045 aaPredicted RBP16.14■□□□□ 0.17
CFDP1-206ENST00000566254 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
CFDP1-206ENST00000566254 SOGA1O94964 1423 aa16.11■□□□□ 0.17
CFDP1-206ENST00000566254 PYGBP11216 843 aa16.11■□□□□ 0.17
CFDP1-206ENST00000566254 CHMP7Q8WUX9 453 aaPredicted RBP16.1■□□□□ 0.17
CFDP1-206ENST00000566254 SYNJ1O43426 1573 aa16.09■□□□□ 0.17
CFDP1-206ENST00000566254 PRKAR2AP13861 404 aaKnown RBP16.08■□□□□ 0.16
CFDP1-206ENST00000566254 FXR2P51116 673 aaKnown RBP eCLIP16.08■□□□□ 0.16
CFDP1-206ENST00000566254 KDM2AQ9Y2K7 1162 aa16.08■□□□□ 0.16
CFDP1-206ENST00000566254 SGIP1Q9BQI5 828 aa16.06■□□□□ 0.16
CFDP1-206ENST00000566254 TSHZ2Q9NRE2 1034 aa16.06■□□□□ 0.16
CFDP1-206ENST00000566254 STK25O00506 426 aa16.05■□□□□ 0.16
CFDP1-206ENST00000566254 TSPYL2Q9H2G4 693 aaPredicted RBP16.05■□□□□ 0.16
CFDP1-206ENST00000566254 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
CFDP1-206ENST00000566254 NKX1-1Q15270 411 aaPredicted RBP16.04■□□□□ 0.16
CFDP1-206ENST00000566254 FGD5Q6ZNL6 1462 aa16.03■□□□□ 0.16
CFDP1-206ENST00000566254 GAPVD1Q14C86 1478 aa16.03■□□□□ 0.16
CFDP1-206ENST00000566254 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
CFDP1-206ENST00000566254 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
CFDP1-206ENST00000566254 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
CFDP1-206ENST00000566254 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16■□□□□ 0.15
CFDP1-206ENST00000566254 ZFP91Q96JP5 570 aaPredicted RBP16■□□□□ 0.15
CFDP1-206ENST00000566254 CHRDL2Q6WN34 429 aa15.97■□□□□ 0.15
CFDP1-206ENST00000566254 BCL11BQ9C0K0 894 aaPredicted RBP15.96■□□□□ 0.15
CFDP1-206ENST00000566254 CUX1P39880 1505 aa15.95■□□□□ 0.14
CFDP1-206ENST00000566254 GTPBP6O43824 516 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms