RNA–Protein interactions for RNA: ENST00000562706.5

TMX3-204, Transcript of thioredoxin related transmembrane protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMX3, Length 937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-204ENST00000562706 ADGRL1O94910 1474 aa15.08■□□□□ 0
TMX3-204ENST00000562706 ZCCHC6Q5VYS8 1495 aaKnown RBP15.07■□□□□ 0
TMX3-204ENST00000562706 KIF13AQ9H1H9 1805 aa15.05■□□□□ -0
TMX3-204ENST00000562706 ZBTB22O15209 634 aa15.03■□□□□ -0
TMX3-204ENST00000562706 URB2Q14146 1524 aaKnown RBP15.02■□□□□ -0
TMX3-204ENST00000562706 FANCD2Q9BXW9 1451 aa15.01□□□□□ -0.01
TMX3-204ENST00000562706 POLA2Q14181 598 aa14.97□□□□□ -0.01
TMX3-204ENST00000562706 ATF5Q9Y2D1 282 aaPredicted RBP14.97□□□□□ -0.01
TMX3-204ENST00000562706 GAPVD1Q14C86 1478 aa14.95□□□□□ -0.02
TMX3-204ENST00000562706 KDM6BO15054 1643 aa14.95□□□□□ -0.02
TMX3-204ENST00000562706 CLASP1Q7Z460 1538 aa14.93□□□□□ -0.02
TMX3-204ENST00000562706 IFT140Q96RY7 1462 aa14.93□□□□□ -0.02
TMX3-204ENST00000562706 EIF4G3O43432 1585 aaKnown RBP14.9□□□□□ -0.02
TMX3-204ENST00000562706 FAM69CQ0P6D2 419 aa14.85□□□□□ -0.03
TMX3-204ENST00000562706 CERKQ8TCT0 537 aa14.81□□□□□ -0.04
TMX3-204ENST00000562706 AQRO60306 1485 aaKnown RBP eCLIP14.8□□□□□ -0.044e-8■■■■□ 24.7
TMX3-204ENST00000562706 RBM42Q9BTD8 480 aaKnown RBP14.78□□□□□ -0.04
TMX3-204ENST00000562706 PEG3Q9GZU2 1588 aa14.77□□□□□ -0.04
TMX3-204ENST00000562706 ABCC10Q5T3U5 1492 aa14.72□□□□□ -0.05
TMX3-204ENST00000562706 POTEHQ6S545 545 aa14.72□□□□□ -0.05
TMX3-204ENST00000562706 SYNJ1O43426 1573 aa14.72□□□□□ -0.05
TMX3-204ENST00000562706 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
TMX3-204ENST00000562706 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
TMX3-204ENST00000562706 CHMP7Q8WUX9 453 aaPredicted RBP14.64□□□□□ -0.07
TMX3-204ENST00000562706 TSPOAP1O95153 1857 aa14.62□□□□□ -0.07
TMX3-204ENST00000562706 CFTRP13569 1480 aa14.62□□□□□ -0.07
TMX3-204ENST00000562706 DIP2BQ9P265 1576 aa14.6□□□□□ -0.07
TMX3-204ENST00000562706 SNAPC4Q5SXM2 1469 aa14.54□□□□□ -0.08
TMX3-204ENST00000562706 TOP2BQ02880 1626 aa14.53□□□□□ -0.08
TMX3-204ENST00000562706 TARBP1Q13395 1621 aaKnown RBP14.52□□□□□ -0.08
TMX3-204ENST00000562706 MROH2BQ7Z745 1585 aa14.52□□□□□ -0.08
TMX3-204ENST00000562706 TOPBP1Q92547 1522 aa14.52□□□□□ -0.08
TMX3-204ENST00000562706 MAPKBP1O60336 1514 aa14.46□□□□□ -0.1
TMX3-204ENST00000562706 AKT1S1Q96B36 256 aa14.45□□□□□ -0.1
TMX3-204ENST00000562706 CHRDL2Q6WN34 429 aa14.44□□□□□ -0.1
TMX3-204ENST00000562706 TDRD9Q8NDG6 1382 aaKnown RBP14.44□□□□□ -0.1
TMX3-204ENST00000562706 COL17A1Q9UMD9 1497 aaPredicted RBP14.43□□□□□ -0.1
TMX3-204ENST00000562706 PCF11O94913 1555 aaKnown RBP14.42□□□□□ -0.1
TMX3-204ENST00000562706 NPM1P06748 294 aaKnown RBP eCLIP14.41□□□□□ -0.1
TMX3-204ENST00000562706 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
TMX3-204ENST00000562706 CSRNP3Q8WYN3 585 aa14.38□□□□□ -0.11
TMX3-204ENST00000562706 CEP170Q5SW79 1584 aa14.36□□□□□ -0.11
TMX3-204ENST00000562706 HSPA2P54652 639 aa14.36□□□□□ -0.11
TMX3-204ENST00000562706 EHMT2Q96KQ7 1210 aa14.35□□□□□ -0.11
TMX3-204ENST00000562706 REM2Q8IYK8 340 aaPredicted RBP14.33□□□□□ -0.12
TMX3-204ENST00000562706 PTPRMP28827 1452 aa14.32□□□□□ -0.12
TMX3-204ENST00000562706 ABCC8Q09428 1581 aa14.3□□□□□ -0.12
TMX3-204ENST00000562706 MKRN4PQ13434 485 aaPredicted RBP14.3□□□□□ -0.12
TMX3-204ENST00000562706 PPRC1Q5VV67 1664 aaKnown RBP14.3□□□□□ -0.12
TMX3-204ENST00000562706 RAD54L2Q9Y4B4 1467 aa14.28□□□□□ -0.12
TMX3-204ENST00000562706 DNMBPQ6XZF7 1577 aa14.26□□□□□ -0.13
TMX3-204ENST00000562706 POLA1P09884 1462 aaPredicted RBP14.25□□□□□ -0.13
TMX3-204ENST00000562706 MED1Q15648 1581 aaPredicted RBP14.24□□□□□ -0.13
TMX3-204ENST00000562706 SPDYE2BA6NHP3 402 aa14.23□□□□□ -0.13
TMX3-204ENST00000562706 SPDYE6P0CI01 402 aa14.23□□□□□ -0.13
TMX3-204ENST00000562706 SPDYE2Q495Y8 402 aa14.23□□□□□ -0.13
TMX3-204ENST00000562706 GRIN2BQ13224 1484 aa14.23□□□□□ -0.13
TMX3-204ENST00000562706 PITPNM1O00562 1244 aa14.2□□□□□ -0.14
TMX3-204ENST00000562706 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
TMX3-204ENST00000562706 SHROOM2Q13796 1616 aa14.19□□□□□ -0.14
TMX3-204ENST00000562706 SOGA1O94964 1423 aa14.18□□□□□ -0.14
TMX3-204ENST00000562706 ADCY10Q96PN6 1610 aa14.18□□□□□ -0.14
TMX3-204ENST00000562706 WDR97A6NE52 1622 aa14.14□□□□□ -0.15
TMX3-204ENST00000562706 KIF21BO75037 1637 aa14.14□□□□□ -0.15
TMX3-204ENST00000562706 SRCAPQ6ZRS2 3230 aa14.13□□□□□ -0.15
TMX3-204ENST00000562706 ADAMTSL3P82987 1691 aa14.13□□□□□ -0.15
TMX3-204ENST00000562706 WIZO95785 1651 aa14.12□□□□□ -0.15
TMX3-204ENST00000562706 PIP4P2Q8N4L2 257 aa14.12□□□□□ -0.15
TMX3-204ENST00000562706 PRG4Q92954 1404 aaPredicted RBP14.12□□□□□ -0.15
TMX3-204ENST00000562706 SSUH2Q9Y2M2 353 aa14.08□□□□□ -0.16
TMX3-204ENST00000562706 NUP160Q12769 1436 aa14.07□□□□□ -0.16
TMX3-204ENST00000562706 IFFO2Q5TF58 517 aa14.07□□□□□ -0.16
TMX3-204ENST00000562706 GLI2P10070 1586 aa14.07□□□□□ -0.16
TMX3-204ENST00000562706 ZNF692Q9BU19 519 aaPredicted RBP14.05□□□□□ -0.16
TMX3-204ENST00000562706 GRIN2AQ12879 1464 aa14.05□□□□□ -0.16
TMX3-204ENST00000562706 FXR2P51116 673 aaKnown RBP eCLIP14.04□□□□□ -0.16
TMX3-204ENST00000562706 IQSEC2Q5JU85 1478 aa14.01□□□□□ -0.17
TMX3-204ENST00000562706 TEX14Q8IWB6 1497 aa14.01□□□□□ -0.17
TMX3-204ENST00000562706 PBRM1Q86U86 1689 aa14□□□□□ -0.17
TMX3-204ENST00000562706 UBAP1LF5GYI3 381 aa13.98□□□□□ -0.17
TMX3-204ENST00000562706 JPH4Q96JJ6 628 aa13.98□□□□□ -0.17
TMX3-204ENST00000562706 MADDQ8WXG6 1647 aa13.97□□□□□ -0.17
TMX3-204ENST00000562706 HSPA1LP34931 641 aa13.97□□□□□ -0.17
TMX3-204ENST00000562706 LTBP4Q8N2S1 1624 aa13.97□□□□□ -0.17
TMX3-204ENST00000562706 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
TMX3-204ENST00000562706 ASXL2Q76L83 1435 aa13.96□□□□□ -0.18
TMX3-204ENST00000562706 YEATS2Q9ULM3 1422 aa13.95□□□□□ -0.18
TMX3-204ENST00000562706 MAP3K4Q9Y6R4 1608 aa13.94□□□□□ -0.18
TMX3-204ENST00000562706 CLEC11AQ9Y240 323 aa13.93□□□□□ -0.18
TMX3-204ENST00000562706 PLB1Q6P1J6 1458 aa13.92□□□□□ -0.18
TMX3-204ENST00000562706 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
TMX3-204ENST00000562706 FGD5Q6ZNL6 1462 aa13.91□□□□□ -0.18
TMX3-204ENST00000562706 STRCQ7RTU9 1775 aa13.91□□□□□ -0.18
TMX3-204ENST00000562706 BCORL1Q5H9F3 1711 aa13.89□□□□□ -0.19
TMX3-204ENST00000562706 PTPRTO14522 1441 aa13.89□□□□□ -0.19
TMX3-204ENST00000562706 RIMS1Q86UR5 1692 aaKnown RBP13.87□□□□□ -0.19
TMX3-204ENST00000562706 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
TMX3-204ENST00000562706 EPRSP07814 1512 aaKnown RBP13.84□□□□□ -0.19
TMX3-204ENST00000562706 KIAA0586Q9BVV6 1533 aa13.84□□□□□ -0.19
TMX3-204ENST00000562706 ARID4BQ4LE39 1312 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms