RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 NPM1P06748 294 aaKnown RBP eCLIP16.72■□□□□ 0.27
SYNM-203ENST00000560674 CLIP1P30622 1438 aa16.71■□□□□ 0.26
SYNM-203ENST00000560674 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
SYNM-203ENST00000560674 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
SYNM-203ENST00000560674 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
SYNM-203ENST00000560674 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
SYNM-203ENST00000560674 GOLGA6L22H0YM25 854 aa16.65■□□□□ 0.26
SYNM-203ENST00000560674 RRP7BPQ9NSQ0 103 aa16.63■□□□□ 0.25
SYNM-203ENST00000560674 MYO15BQ96JP2 1530 aa16.59■□□□□ 0.25
SYNM-203ENST00000560674 CDK11BP21127 795 aaKnown RBP16.58■□□□□ 0.25
SYNM-203ENST00000560674 SUPT16HQ9Y5B9 1047 aaKnown RBP16.57■□□□□ 0.24
SYNM-203ENST00000560674 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
SYNM-203ENST00000560674 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
SYNM-203ENST00000560674 GOLGA3Q08378 1498 aa16.56■□□□□ 0.24
SYNM-203ENST00000560674 CEP162Q5TB80 1403 aa16.55■□□□□ 0.24
SYNM-203ENST00000560674 CFAP53Q96M91 514 aa16.54■□□□□ 0.24
SYNM-203ENST00000560674 EEA1Q15075 1411 aa16.53■□□□□ 0.24
SYNM-203ENST00000560674 PTMAP06454 111 aaKnown RBP16.52■□□□□ 0.23
SYNM-203ENST00000560674 CDCA8Q53HL2 280 aa16.51■□□□□ 0.23
SYNM-203ENST00000560674 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
SYNM-203ENST00000560674 CASC1Q6TDU7 716 aa16.5■□□□□ 0.23
SYNM-203ENST00000560674 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
SYNM-203ENST00000560674 KNSTRNQ9Y448 316 aa16.5■□□□□ 0.23
SYNM-203ENST00000560674 ERICH6BQ5W0A0 696 aa16.5■□□□□ 0.23
SYNM-203ENST00000560674 SENP3-EIF4A1A0A087X0R7 540 aa16.49■□□□□ 0.23
SYNM-203ENST00000560674 RGL3Q3MIN7 710 aa16.49■□□□□ 0.23
SYNM-203ENST00000560674 TNNT2P45379 298 aaPredicted RBP16.49■□□□□ 0.23
SYNM-203ENST00000560674 FTSJ3Q8IY81 847 aaKnown RBP16.49■□□□□ 0.23
SYNM-203ENST00000560674 ZBTB7CA1YPR0 619 aa16.47■□□□□ 0.23
SYNM-203ENST00000560674 ZRSR1Q15695 479 aaKnown RBP16.46■□□□□ 0.23
SYNM-203ENST00000560674 PPP1R15AO75807 674 aaPredicted RBP16.46■□□□□ 0.23
SYNM-203ENST00000560674 CARD11Q9BXL7 1154 aa16.45■□□□□ 0.22
SYNM-203ENST00000560674 LAS1LQ9Y4W2 734 aaKnown RBP16.45■□□□□ 0.22
SYNM-203ENST00000560674 DNTTIP2Q5QJE6 756 aaKnown RBP16.45■□□□□ 0.22
SYNM-203ENST00000560674 NOP58Q9Y2X3 529 aaKnown RBP16.45■□□□□ 0.22
SYNM-203ENST00000560674 C14orf37Q86TY3 774 aa16.44■□□□□ 0.22
SYNM-203ENST00000560674 PLEKHD1A6NEE1 506 aa16.43■□□□□ 0.22
SYNM-203ENST00000560674 A0A0G2JS52 829 aa16.43■□□□□ 0.22
SYNM-203ENST00000560674 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
SYNM-203ENST00000560674 RGS3P49796 1198 aa16.41■□□□□ 0.22
SYNM-203ENST00000560674 NAP1L5Q96NT1 182 aaPredicted RBP16.41■□□□□ 0.22
SYNM-203ENST00000560674 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
SYNM-203ENST00000560674 KCNH8Q96L42 1107 aa16.4■□□□□ 0.22
SYNM-203ENST00000560674 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
SYNM-203ENST00000560674 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
SYNM-203ENST00000560674 PLEKHG5O94827 1062 aa16.38■□□□□ 0.21
SYNM-203ENST00000560674 TPRNQ4KMQ1 711 aa16.38■□□□□ 0.21
SYNM-203ENST00000560674 CFDP1Q9UEE9 299 aaPredicted RBP16.37■□□□□ 0.21
SYNM-203ENST00000560674 RTN4Q9NQC3 1192 aaKnown RBP16.37■□□□□ 0.21
SYNM-203ENST00000560674 NUDCQ9Y266 331 aa16.36■□□□□ 0.21
SYNM-203ENST00000560674 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
SYNM-203ENST00000560674 SIN3AQ96ST3 1273 aa16.35■□□□□ 0.21
SYNM-203ENST00000560674 CHMP4BQ9H444 224 aaKnown RBP16.35■□□□□ 0.21
SYNM-203ENST00000560674 CEP164Q9UPV0 1460 aa16.34■□□□□ 0.21
SYNM-203ENST00000560674 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
SYNM-203ENST00000560674 HSP90AB1P08238 724 aaKnown RBP16.34■□□□□ 0.21
SYNM-203ENST00000560674 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.21
SYNM-203ENST00000560674 MS4A1P11836 297 aa16.33■□□□□ 0.2
SYNM-203ENST00000560674 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
SYNM-203ENST00000560674 KIF27Q86VH2 1401 aa16.3■□□□□ 0.2
SYNM-203ENST00000560674 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
SYNM-203ENST00000560674 GOLGA6L6A8MZA4 724 aa16.27■□□□□ 0.2
SYNM-203ENST00000560674 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
SYNM-203ENST00000560674 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
SYNM-203ENST00000560674 NACADO15069 1562 aa16.25■□□□□ 0.19
SYNM-203ENST00000560674 CCER2I3L3R5 266 aa16.24■□□□□ 0.19
SYNM-203ENST00000560674 POGKQ9P215 609 aa16.24■□□□□ 0.19
SYNM-203ENST00000560674 PNNQ9H307 717 aaKnown RBP16.23■□□□□ 0.19
SYNM-203ENST00000560674 L1TD1Q5T7N2 865 aaKnown RBP16.23■□□□□ 0.19
SYNM-203ENST00000560674 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
SYNM-203ENST00000560674 HAP1P54257 671 aaPredicted RBP16.23■□□□□ 0.19
SYNM-203ENST00000560674 OS9Q13438 667 aaPredicted RBP16.23■□□□□ 0.19
SYNM-203ENST00000560674 NRDCO43847 1150 aa16.22■□□□□ 0.19
SYNM-203ENST00000560674 FGD1P98174 961 aa16.22■□□□□ 0.19
SYNM-203ENST00000560674 CCNB3Q8WWL7 1395 aa16.22■□□□□ 0.19
SYNM-203ENST00000560674 TMF1P82094 1093 aa16.22■□□□□ 0.19
SYNM-203ENST00000560674 DEKP35659 375 aaKnown RBP16.21■□□□□ 0.19
SYNM-203ENST00000560674 TIMELESSQ9UNS1 1208 aa16.21■□□□□ 0.19
SYNM-203ENST00000560674 KCNJ4P48050 445 aa16.2■□□□□ 0.18
SYNM-203ENST00000560674 RBM19Q9Y4C8 960 aaKnown RBP16.19■□□□□ 0.18
SYNM-203ENST00000560674 CHAF1AQ13111 956 aaPredicted RBP16.18■□□□□ 0.18
SYNM-203ENST00000560674 GOLGA6L4A6NEF3 574 aa16.18■□□□□ 0.18
SYNM-203ENST00000560674 MSNP26038 577 aaKnown RBP16.18■□□□□ 0.18
SYNM-203ENST00000560674 TAOK2Q9UL54 1235 aa16.17■□□□□ 0.18
SYNM-203ENST00000560674 BAZ1BQ9UIG0 1483 aaKnown RBP16.16■□□□□ 0.18
SYNM-203ENST00000560674 DCAF11Q8TEB1 546 aa16.16■□□□□ 0.18
SYNM-203ENST00000560674 ARID4BQ4LE39 1312 aaPredicted RBP16.16■□□□□ 0.18
SYNM-203ENST00000560674 FHAD1B1AJZ9 1412 aa16.16■□□□□ 0.18
SYNM-203ENST00000560674 MCCP23508 829 aa16.15■□□□□ 0.18
SYNM-203ENST00000560674 NAP1L2Q9ULW6 460 aaPredicted RBP16.15■□□□□ 0.18
SYNM-203ENST00000560674 TULP1O00294 542 aaPredicted RBP16.15■□□□□ 0.18
SYNM-203ENST00000560674 CFAP44Q96MT7 982 aa16.14■□□□□ 0.17
SYNM-203ENST00000560674 SPRYD3Q8NCJ5 442 aa16.13■□□□□ 0.17
SYNM-203ENST00000560674 HSPA5P11021 654 aaKnown RBP16.11■□□□□ 0.17
SYNM-203ENST00000560674 LMOD2Q6P5Q4 547 aa16.11■□□□□ 0.17
SYNM-203ENST00000560674 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
SYNM-203ENST00000560674 SETD5Q9C0A6 1442 aa16.09■□□□□ 0.17
SYNM-203ENST00000560674 KTN1Q86UP2 1357 aaKnown RBP16.08■□□□□ 0.17
SYNM-203ENST00000560674 KANK1Q14678 1352 aa16.07■□□□□ 0.16
SYNM-203ENST00000560674 DRC7Q8IY82 874 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms