RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 RIMBP3CA6NJZ7 1639 aa9.51□□□□□ -0.89
IDH3A-206ENST00000558535 RIMBP3BA6NNM3 1639 aa9.51□□□□□ -0.89
IDH3A-206ENST00000558535 RIMBP3Q9UFD9 1639 aa9.51□□□□□ -0.89
IDH3A-206ENST00000558535 ABCA10Q8WWZ4 1543 aa9.51□□□□□ -0.89
IDH3A-206ENST00000558535 RAD54L2Q9Y4B4 1467 aa9.51□□□□□ -0.89
IDH3A-206ENST00000558535 PODXL2Q9NZ53 605 aa9.5□□□□□ -0.89
IDH3A-206ENST00000558535 SYNJ1O43426 1573 aa9.5□□□□□ -0.89
IDH3A-206ENST00000558535 SYNJ2O15056 1496 aa9.49□□□□□ -0.89
IDH3A-206ENST00000558535 SNAPC4Q5SXM2 1469 aa9.49□□□□□ -0.89
IDH3A-206ENST00000558535 PKNOX2Q96KN3 472 aa9.49□□□□□ -0.89
IDH3A-206ENST00000558535 TDRD9Q8NDG6 1382 aaKnown RBP9.49□□□□□ -0.89
IDH3A-206ENST00000558535 WRNQ14191 1432 aaPredicted RBP eCLIP9.49□□□□□ -0.89
IDH3A-206ENST00000558535 CHD1O14646 1710 aa9.48□□□□□ -0.89
IDH3A-206ENST00000558535 NEFLP07196 543 aa9.48□□□□□ -0.89
IDH3A-206ENST00000558535 GAPVD1Q14C86 1478 aa9.48□□□□□ -0.89
IDH3A-206ENST00000558535 CLASP1Q7Z460 1538 aa9.47□□□□□ -0.89
IDH3A-206ENST00000558535 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
IDH3A-206ENST00000558535 ABCA5Q8WWZ7 1642 aa9.46□□□□□ -0.9
IDH3A-206ENST00000558535 CHMP7Q8WUX9 453 aaPredicted RBP9.46□□□□□ -0.9
IDH3A-206ENST00000558535 TOP2BQ02880 1626 aa9.45□□□□□ -0.9
IDH3A-206ENST00000558535 BIVM-ERCC5R4GMW8 1640 aa9.45□□□□□ -0.9
IDH3A-206ENST00000558535 FBLN2P98095 1184 aa9.43□□□□□ -0.9
IDH3A-206ENST00000558535 POTEDQ86YR6 584 aa9.43□□□□□ -0.9
IDH3A-206ENST00000558535 PBRM1Q86U86 1689 aa9.43□□□□□ -0.9
IDH3A-206ENST00000558535 ERICH3Q5RHP9 1530 aa9.41□□□□□ -0.9
IDH3A-206ENST00000558535 ARAP1Q96P48 1450 aa9.41□□□□□ -0.9
IDH3A-206ENST00000558535 FHAD1B1AJZ9 1412 aa9.4□□□□□ -0.9
IDH3A-206ENST00000558535 ANO8Q9HCE9 1232 aaPredicted RBP9.4□□□□□ -0.9
IDH3A-206ENST00000558535 GRIN2AQ12879 1464 aa9.39□□□□□ -0.91
IDH3A-206ENST00000558535 ADAMTS12P58397 1594 aa9.38□□□□□ -0.91
IDH3A-206ENST00000558535 GLIPR1L2Q4G1C9 344 aa9.38□□□□□ -0.91
IDH3A-206ENST00000558535 RTN4Q9NQC3 1192 aaKnown RBP9.38□□□□□ -0.91
IDH3A-206ENST00000558535 NUP160Q12769 1436 aa9.38□□□□□ -0.91
IDH3A-206ENST00000558535 CYB5RLQ6IPT4 315 aa9.37□□□□□ -0.91
IDH3A-206ENST00000558535 TSHZ2Q9NRE2 1034 aa9.36□□□□□ -0.91
IDH3A-206ENST00000558535 DIEXFQ68CQ4 756 aaKnown RBP9.33□□□□□ -0.92
IDH3A-206ENST00000558535 SHROOM2Q13796 1616 aa9.32□□□□□ -0.92
IDH3A-206ENST00000558535 PLEKHG5O94827 1062 aa9.31□□□□□ -0.92
IDH3A-206ENST00000558535 CEP170Q5SW79 1584 aa9.3□□□□□ -0.92
IDH3A-206ENST00000558535 KIF27Q86VH2 1401 aa9.3□□□□□ -0.92
IDH3A-206ENST00000558535 KCNA4P22459 653 aa9.29□□□□□ -0.92
IDH3A-206ENST00000558535 CUL7Q14999 1698 aa9.28□□□□□ -0.92
IDH3A-206ENST00000558535 TRHP20396 242 aaPredicted RBP9.25□□□□□ -0.93
IDH3A-206ENST00000558535 CCER1Q8TC90 406 aaPredicted RBP9.24□□□□□ -0.93
IDH3A-206ENST00000558535 RUSC2Q8N2Y8 1516 aa9.24□□□□□ -0.93
IDH3A-206ENST00000558535 KIAA0586Q9BVV6 1533 aa9.24□□□□□ -0.93
IDH3A-206ENST00000558535 FANCIQ9NVI1 1328 aa9.24□□□□□ -0.93
IDH3A-206ENST00000558535 IGF1RP08069 1367 aa9.24□□□□□ -0.93
IDH3A-206ENST00000558535 PRG4Q92954 1404 aaPredicted RBP9.23□□□□□ -0.93
IDH3A-206ENST00000558535 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
IDH3A-206ENST00000558535 JPH4Q96JJ6 628 aa9.22□□□□□ -0.93
IDH3A-206ENST00000558535 SALL2Q9Y467 1007 aaPredicted RBP9.21□□□□□ -0.94
IDH3A-206ENST00000558535 SUPT16HQ9Y5B9 1047 aaKnown RBP9.2□□□□□ -0.94
IDH3A-206ENST00000558535 YTHDC1Q96MU7 727 aaKnown RBP9.2□□□□□ -0.94
IDH3A-206ENST00000558535 PDE4CQ08493 712 aa9.19□□□□□ -0.94
IDH3A-206ENST00000558535 ERCC6L2Q5T890 1561 aa9.19□□□□□ -0.94
IDH3A-206ENST00000558535 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
IDH3A-206ENST00000558535 CARMIL1Q5VZK9 1371 aa9.19□□□□□ -0.94
IDH3A-206ENST00000558535 DEKP35659 375 aaKnown RBP9.18□□□□□ -0.94
IDH3A-206ENST00000558535 ZNF326Q5BKZ1 582 aaKnown RBP9.18□□□□□ -0.94
IDH3A-206ENST00000558535 CARMIL2Q6F5E8 1435 aa9.18□□□□□ -0.94
IDH3A-206ENST00000558535 MAPKBP1O60336 1514 aa9.17□□□□□ -0.94
IDH3A-206ENST00000558535 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
IDH3A-206ENST00000558535 TAF7LQ5H9L4 462 aa9.17□□□□□ -0.94
IDH3A-206ENST00000558535 FGD1P98174 961 aa9.14□□□□□ -0.95
IDH3A-206ENST00000558535 RAPGEF2Q9Y4G8 1499 aa9.13□□□□□ -0.95
IDH3A-206ENST00000558535 TNIKQ9UKE5 1360 aa9.13□□□□□ -0.95
IDH3A-206ENST00000558535 ABCC10Q5T3U5 1492 aa9.13□□□□□ -0.95
IDH3A-206ENST00000558535 IQGAP2Q13576 1575 aa9.13□□□□□ -0.95
IDH3A-206ENST00000558535 UHRF1BP1LA0JNW5 1464 aa9.13□□□□□ -0.95
IDH3A-206ENST00000558535 RSPH6AQ9H0K4 717 aa9.12□□□□□ -0.95
IDH3A-206ENST00000558535 PTPRGP23470 1445 aa9.12□□□□□ -0.95
IDH3A-206ENST00000558535 UGGT2Q9NYU1 1516 aa9.11□□□□□ -0.95
IDH3A-206ENST00000558535 RBM19Q9Y4C8 960 aaKnown RBP9.1□□□□□ -0.95
IDH3A-206ENST00000558535 ADCY10Q96PN6 1610 aa9.09□□□□□ -0.95
IDH3A-206ENST00000558535 ABCC2Q92887 1545 aa9.09□□□□□ -0.95
IDH3A-206ENST00000558535 GOLGA3Q08378 1498 aa9.08□□□□□ -0.96
IDH3A-206ENST00000558535 PLB1Q6P1J6 1458 aa9.08□□□□□ -0.96
IDH3A-206ENST00000558535 DIP2BQ9P265 1576 aa9.07□□□□□ -0.96
IDH3A-206ENST00000558535 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
IDH3A-206ENST00000558535 UACAQ9BZF9 1416 aa9.06□□□□□ -0.96
IDH3A-206ENST00000558535 GLI2P10070 1586 aa9.06□□□□□ -0.96
IDH3A-206ENST00000558535 C11orf95C9JLR9 678 aaPredicted RBP9.06□□□□□ -0.96
IDH3A-206ENST00000558535 KLHL34Q8N239 644 aa9.06□□□□□ -0.96
IDH3A-206ENST00000558535 KIF13AQ9H1H9 1805 aa9.06□□□□□ -0.96
IDH3A-206ENST00000558535 LOC105371045A0A1W2PR82 267 aa9.06□□□□□ -0.96
IDH3A-206ENST00000558535 EEA1Q15075 1411 aa9.06□□□□□ -0.96
IDH3A-206ENST00000558535 DISP1Q96F81 1524 aa9.05□□□□□ -0.96
IDH3A-206ENST00000558535 PRXQ9BXM0 1461 aa9.05□□□□□ -0.96
IDH3A-206ENST00000558535 FAM69CQ0P6D2 419 aa9.05□□□□□ -0.96
IDH3A-206ENST00000558535 KIAA0556O60303 1618 aa9.04□□□□□ -0.96
IDH3A-206ENST00000558535 KDM5BQ9UGL1 1544 aa9.04□□□□□ -0.96
IDH3A-206ENST00000558535 AMER1Q5JTC6 1135 aaPredicted RBP9.03□□□□□ -0.96
IDH3A-206ENST00000558535 AAMPQ13685 434 aa9.02□□□□□ -0.97
IDH3A-206ENST00000558535 CTTNBP2Q8WZ74 1663 aa9.01□□□□□ -0.97
IDH3A-206ENST00000558535 ZMYND15Q9H091 742 aa9.01□□□□□ -0.97
IDH3A-206ENST00000558535 ASXL2Q76L83 1435 aa9.01□□□□□ -0.97
IDH3A-206ENST00000558535 CCDC136Q96JN2 1154 aa9□□□□□ -0.97
IDH3A-206ENST00000558535 TEX14Q8IWB6 1497 aa9□□□□□ -0.97
IDH3A-206ENST00000558535 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms