RNA–Protein interactions for RNA: ENST00000557339.5

LINC01146-207, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3 BASIC

Gene LINC01146, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-207ENST00000557339 TSPYL2Q9H2G4 693 aaPredicted RBP11.62□□□□□ -0.55
LINC01146-207ENST00000557339 RTN4Q9NQC3 1192 aaKnown RBP11.62□□□□□ -0.55
LINC01146-207ENST00000557339 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
LINC01146-207ENST00000557339 CIZ1Q9ULV3 898 aaPredicted RBP11.61□□□□□ -0.55
LINC01146-207ENST00000557339 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
LINC01146-207ENST00000557339 CD44P16070 742 aaKnown RBP11.59□□□□□ -0.55
LINC01146-207ENST00000557339 AMER1Q5JTC6 1135 aaPredicted RBP11.59□□□□□ -0.55
LINC01146-207ENST00000557339 FAM212AQ96EL1 285 aa11.59□□□□□ -0.55
LINC01146-207ENST00000557339 SCRIBQ14160 1630 aa11.58□□□□□ -0.56
LINC01146-207ENST00000557339 HAX1O00165 279 aa11.58□□□□□ -0.56
LINC01146-207ENST00000557339 EVX2Q03828 476 aa11.55□□□□□ -0.56
LINC01146-207ENST00000557339 PKD2Q13563 968 aa11.55□□□□□ -0.56
LINC01146-207ENST00000557339 GSE1Q14687 1217 aa11.55□□□□□ -0.56
LINC01146-207ENST00000557339 SHROOM4Q9ULL8 1493 aa11.55□□□□□ -0.56
LINC01146-207ENST00000557339 PAK3O75914 559 aaPredicted RBP11.54□□□□□ -0.56
LINC01146-207ENST00000557339 ZRANB1Q9UGI0 708 aa11.54□□□□□ -0.56
LINC01146-207ENST00000557339 UNC13AQ9UPW8 1703 aa11.54□□□□□ -0.56
LINC01146-207ENST00000557339 CCDC61Q9Y6R9 512 aa11.51□□□□□ -0.57
LINC01146-207ENST00000557339 PYGBP11216 843 aa11.48□□□□□ -0.57
LINC01146-207ENST00000557339 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
LINC01146-207ENST00000557339 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
LINC01146-207ENST00000557339 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
LINC01146-207ENST00000557339 TRIM41Q8WV44 630 aa11.41□□□□□ -0.58
LINC01146-207ENST00000557339 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
LINC01146-207ENST00000557339 KIF12Q96FN5 646 aa11.39□□□□□ -0.59
LINC01146-207ENST00000557339 RGL2O15211 777 aa11.38□□□□□ -0.59
LINC01146-207ENST00000557339 MAP3K13O43283 966 aa11.37□□□□□ -0.59
LINC01146-207ENST00000557339 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
LINC01146-207ENST00000557339 PCDHB13Q9Y5F0 798 aa11.33□□□□□ -0.6
LINC01146-207ENST00000557339 BICRAQ9NZM4 1560 aa11.33□□□□□ -0.6
LINC01146-207ENST00000557339 MS4A3Q96HJ5 214 aa11.32□□□□□ -0.6
LINC01146-207ENST00000557339 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
LINC01146-207ENST00000557339 IFNL1Q8IU54 200 aa11.31□□□□□ -0.6
LINC01146-207ENST00000557339 GALR2O43603 387 aaPredicted RBP11.3□□□□□ -0.6
LINC01146-207ENST00000557339 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
LINC01146-207ENST00000557339 GABBR2O75899 941 aa11.28□□□□□ -0.6
LINC01146-207ENST00000557339 SP7Q8TDD2 431 aaPredicted RBP11.28□□□□□ -0.6
LINC01146-207ENST00000557339 SGIP1Q9BQI5 828 aa11.28□□□□□ -0.6
LINC01146-207ENST00000557339 ZNF467Q7Z7K2 595 aaPredicted RBP11.27□□□□□ -0.61
LINC01146-207ENST00000557339 TRPC6Q9Y210 931 aa11.26□□□□□ -0.61
LINC01146-207ENST00000557339 CLCN6P51797 869 aa11.22□□□□□ -0.61
LINC01146-207ENST00000557339 VGFO15240 615 aaPredicted RBP11.2□□□□□ -0.62
LINC01146-207ENST00000557339 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.19□□□□□ -0.62
LINC01146-207ENST00000557339 ZFP91Q96JP5 570 aaPredicted RBP11.19□□□□□ -0.62
LINC01146-207ENST00000557339 PSEN1P49768 467 aa11.18□□□□□ -0.62
LINC01146-207ENST00000557339 PDAP1Q13442 181 aaKnown RBP11.18□□□□□ -0.62
LINC01146-207ENST00000557339 CHGAP10645 457 aaKnown RBP11.14□□□□□ -0.63
LINC01146-207ENST00000557339 BMP2KQ9NSY1 1161 aaPredicted RBP11.14□□□□□ -0.63
LINC01146-207ENST00000557339 TAOK2Q9UL54 1235 aa11.14□□□□□ -0.63
LINC01146-207ENST00000557339 BAZ1AQ9NRL2 1556 aaPredicted RBP11.13□□□□□ -0.63
LINC01146-207ENST00000557339 STK25O00506 426 aa11.13□□□□□ -0.63
LINC01146-207ENST00000557339 TMEM106CQ9BVX2 250 aa11.13□□□□□ -0.63
LINC01146-207ENST00000557339 TIE1P35590 1138 aa11.12□□□□□ -0.63
LINC01146-207ENST00000557339 BCL11BQ9C0K0 894 aaPredicted RBP11.12□□□□□ -0.63
LINC01146-207ENST00000557339 TTLL13PA6NNM8 815 aa11.11□□□□□ -0.63
LINC01146-207ENST00000557339 STK24Q9Y6E0 443 aa11.1□□□□□ -0.63
LINC01146-207ENST00000557339 CECR2Q9BXF3 1484 aa11.1□□□□□ -0.63
LINC01146-207ENST00000557339 SMARCA4P51532 1647 aa11.09□□□□□ -0.63
LINC01146-207ENST00000557339 HS6ST3Q8IZP7 471 aa11.09□□□□□ -0.63
LINC01146-207ENST00000557339 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
LINC01146-207ENST00000557339 ATMINO43313 823 aaPredicted RBP11.07□□□□□ -0.64
LINC01146-207ENST00000557339 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
LINC01146-207ENST00000557339 ATN1P54259 1190 aaPredicted RBP11.07□□□□□ -0.64
LINC01146-207ENST00000557339 ASTLQ6HA08 431 aaPredicted RBP11.06□□□□□ -0.64
LINC01146-207ENST00000557339 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
LINC01146-207ENST00000557339 MROH2BQ7Z745 1585 aa11.05□□□□□ -0.64
LINC01146-207ENST00000557339 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
LINC01146-207ENST00000557339 PELP1Q8IZL8 1130 aaKnown RBP11.03□□□□□ -0.64
LINC01146-207ENST00000557339 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
LINC01146-207ENST00000557339 EIF4G1Q04637 1599 aaKnown RBP11.03□□□□□ -0.64
LINC01146-207ENST00000557339 RSF1Q96T23 1441 aaPredicted RBP11.02□□□□□ -0.64
LINC01146-207ENST00000557339 EFCAB3Q8N7B9 438 aa11□□□□□ -0.65
LINC01146-207ENST00000557339 WIZO95785 1651 aa10.99□□□□□ -0.65
LINC01146-207ENST00000557339 GOLGA2Q08379 1002 aa10.98□□□□□ -0.65
LINC01146-207ENST00000557339 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
LINC01146-207ENST00000557339 BBXQ8WY36 941 aaPredicted RBP10.97□□□□□ -0.65
LINC01146-207ENST00000557339 SMARCA2P51531 1590 aa10.95□□□□□ -0.66
LINC01146-207ENST00000557339 PEG3Q9GZU2 1588 aa10.95□□□□□ -0.66
LINC01146-207ENST00000557339 MKRN3Q13064 507 aaKnown RBP10.95□□□□□ -0.66
LINC01146-207ENST00000557339 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
LINC01146-207ENST00000557339 CC2D2AQ9P2K1 1620 aa10.91□□□□□ -0.66
LINC01146-207ENST00000557339 MFRPQ9BY79 579 aa10.91□□□□□ -0.66
LINC01146-207ENST00000557339 SOX12O15370 315 aa10.9□□□□□ -0.66
LINC01146-207ENST00000557339 TOP2AP11388 1531 aaKnown RBP10.89□□□□□ -0.67
LINC01146-207ENST00000557339 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
LINC01146-207ENST00000557339 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
LINC01146-207ENST00000557339 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.89□□□□□ -0.67
LINC01146-207ENST00000557339 IRX5P78411 483 aaPredicted RBP10.88□□□□□ -0.67
LINC01146-207ENST00000557339 IER5LQ5T953 404 aa10.88□□□□□ -0.67
LINC01146-207ENST00000557339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.67
LINC01146-207ENST00000557339 METRNQ9UJH8 293 aa10.88□□□□□ -0.67
LINC01146-207ENST00000557339 BAZ1BQ9UIG0 1483 aaKnown RBP10.87□□□□□ -0.67
LINC01146-207ENST00000557339 FBXO22Q8NEZ5 403 aa10.87□□□□□ -0.67
LINC01146-207ENST00000557339 HMGXB3Q12766 1538 aa10.86□□□□□ -0.67
LINC01146-207ENST00000557339 POTEFA5A3E0 1075 aa10.86□□□□□ -0.67
LINC01146-207ENST00000557339 GTPBP6O43824 516 aaPredicted RBP10.86□□□□□ -0.67
LINC01146-207ENST00000557339 C7P10643 843 aa10.86□□□□□ -0.67
LINC01146-207ENST00000557339 NLRP6P59044 892 aa10.86□□□□□ -0.67
LINC01146-207ENST00000557339 COLQQ9Y215 455 aaPredicted RBP10.86□□□□□ -0.67
LINC01146-207ENST00000557339 PAXIP1Q6ZW49 1069 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms