RNA–Protein interactions for RNA: ENST00000556827.1

HIF1A-209, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-209ENST00000556827 CCDC61Q9Y6R9 512 aa15.1■□□□□ 0.01
HIF1A-209ENST00000556827 GALR2O43603 387 aaPredicted RBP15.08■□□□□ 0
HIF1A-209ENST00000556827 FAM212AQ96EL1 285 aa15.08■□□□□ 0
HIF1A-209ENST00000556827 DCBLD2Q96PD2 775 aa15.05■□□□□ -0
HIF1A-209ENST00000556827 MS4A3Q96HJ5 214 aa15.01□□□□□ -0.01
HIF1A-209ENST00000556827 KIF12Q96FN5 646 aa14.99□□□□□ -0.01
HIF1A-209ENST00000556827 DCAF8Q5TAQ9 597 aa14.98□□□□□ -0.01
HIF1A-209ENST00000556827 IFNLR1Q8IU57 520 aaPredicted RBP14.98□□□□□ -0.01
HIF1A-209ENST00000556827 POTEIP0CG38 1075 aa14.96□□□□□ -0.01
HIF1A-209ENST00000556827 MAP3K13O43283 966 aa14.93□□□□□ -0.02
HIF1A-209ENST00000556827 SPOCK2Q92563 424 aa14.92□□□□□ -0.02
HIF1A-209ENST00000556827 GSE1Q14687 1217 aa14.88□□□□□ -0.03
HIF1A-209ENST00000556827 PCDHB13Q9Y5F0 798 aa14.87□□□□□ -0.03
HIF1A-209ENST00000556827 PYGBP11216 843 aa14.84□□□□□ -0.03
HIF1A-209ENST00000556827 SGIP1Q9BQI5 828 aa14.82□□□□□ -0.04
HIF1A-209ENST00000556827 CIZ1Q9ULV3 898 aaPredicted RBP14.8□□□□□ -0.04
HIF1A-209ENST00000556827 ASTLQ6HA08 431 aaPredicted RBP14.78□□□□□ -0.04
HIF1A-209ENST00000556827 TRPC6Q9Y210 931 aa14.78□□□□□ -0.04
HIF1A-209ENST00000556827 ATMINO43313 823 aaPredicted RBP14.77□□□□□ -0.05
HIF1A-209ENST00000556827 IFNL1Q8IU54 200 aa14.77□□□□□ -0.05
HIF1A-209ENST00000556827 TIE1P35590 1138 aa14.74□□□□□ -0.05
HIF1A-209ENST00000556827 BMP2KQ9NSY1 1161 aaPredicted RBP14.74□□□□□ -0.05
HIF1A-209ENST00000556827 PELP1Q8IZL8 1130 aaKnown RBP14.72□□□□□ -0.05
HIF1A-209ENST00000556827 ATN1P54259 1190 aaPredicted RBP14.71□□□□□ -0.05
HIF1A-209ENST00000556827 LHX8Q68G74 356 aa14.71□□□□□ -0.05
HIF1A-209ENST00000556827 TTLL13PA6NNM8 815 aa14.68□□□□□ -0.06
HIF1A-209ENST00000556827 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
HIF1A-209ENST00000556827 SLC39A7Q92504 469 aa14.66□□□□□ -0.06
HIF1A-209ENST00000556827 CHRM1P11229 460 aaPredicted RBP14.65□□□□□ -0.06
HIF1A-209ENST00000556827 ZNF467Q7Z7K2 595 aaPredicted RBP14.65□□□□□ -0.06
HIF1A-209ENST00000556827 METRNQ9UJH8 293 aa14.65□□□□□ -0.06
HIF1A-209ENST00000556827 TMEM106CQ9BVX2 250 aa14.64□□□□□ -0.07
HIF1A-209ENST00000556827 C7P10643 843 aa14.63□□□□□ -0.07
HIF1A-209ENST00000556827 TRIM35Q9UPQ4 493 aa14.6□□□□□ -0.07
HIF1A-209ENST00000556827 TRIM41Q8WV44 630 aa14.59□□□□□ -0.07
HIF1A-209ENST00000556827 SEC24BO95487 1268 aa14.5□□□□□ -0.09
HIF1A-209ENST00000556827 IER5LQ5T953 404 aa14.5□□□□□ -0.09
HIF1A-209ENST00000556827 PSEN1P49768 467 aa14.49□□□□□ -0.09
HIF1A-209ENST00000556827 PDAP1Q13442 181 aaKnown RBP14.48□□□□□ -0.09
HIF1A-209ENST00000556827 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
HIF1A-209ENST00000556827 GOLGA2Q08379 1002 aa14.45□□□□□ -0.1
HIF1A-209ENST00000556827 COLQQ9Y215 455 aaPredicted RBP14.43□□□□□ -0.1
HIF1A-209ENST00000556827 POTEFA5A3E0 1075 aa14.41□□□□□ -0.1
HIF1A-209ENST00000556827 PLCG2P16885 1265 aa14.4□□□□□ -0.1
HIF1A-209ENST00000556827 RIOK3O14730 519 aaKnown RBP14.38□□□□□ -0.11
HIF1A-209ENST00000556827 MKRN3Q13064 507 aaKnown RBP14.37□□□□□ -0.11
HIF1A-209ENST00000556827 ECM2O94769 699 aaPredicted RBP14.36□□□□□ -0.11
HIF1A-209ENST00000556827 RNF25Q96BH1 459 aaPredicted RBP14.36□□□□□ -0.11
HIF1A-209ENST00000556827 OTUD5Q96G74 571 aa14.36□□□□□ -0.11
HIF1A-209ENST00000556827 MAMSTRQ6ZN01 415 aa14.35□□□□□ -0.11
HIF1A-209ENST00000556827 IRX5P78411 483 aaPredicted RBP14.34□□□□□ -0.11
HIF1A-209ENST00000556827 CABP2Q9NPB3 220 aa14.34□□□□□ -0.11
HIF1A-209ENST00000556827 POTEJP0CG39 1038 aa14.33□□□□□ -0.12
HIF1A-209ENST00000556827 OCEL1Q9H607 264 aa14.32□□□□□ -0.12
HIF1A-209ENST00000556827 PKD2Q13563 968 aa14.31□□□□□ -0.12
HIF1A-209ENST00000556827 SCUBE2Q9NQ36 999 aa14.31□□□□□ -0.12
HIF1A-209ENST00000556827 VGFO15240 615 aaPredicted RBP14.3□□□□□ -0.12
HIF1A-209ENST00000556827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.27□□□□□ -0.13
HIF1A-209ENST00000556827 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.26□□□□□ -0.13
HIF1A-209ENST00000556827 ZFP91Q96JP5 570 aaPredicted RBP14.26□□□□□ -0.13
HIF1A-209ENST00000556827 TAOK2Q9UL54 1235 aa14.26□□□□□ -0.13
HIF1A-209ENST00000556827 PDCD7Q8N8D1 485 aaKnown RBP14.21□□□□□ -0.13
HIF1A-209ENST00000556827 RGL2O15211 777 aa14.2□□□□□ -0.14
HIF1A-209ENST00000556827 EFCAB3Q8N7B9 438 aa14.18□□□□□ -0.14
HIF1A-209ENST00000556827 BCL11BQ9C0K0 894 aaPredicted RBP14.16□□□□□ -0.14
HIF1A-209ENST00000556827 STK25O00506 426 aa14.13□□□□□ -0.15
HIF1A-209ENST00000556827 L3MBTL3Q96JM7 780 aaPredicted RBP14.13□□□□□ -0.15
HIF1A-209ENST00000556827 STK24Q9Y6E0 443 aa14.13□□□□□ -0.15
HIF1A-209ENST00000556827 ILDR1Q86SU0 546 aaPredicted RBP14.11□□□□□ -0.15
HIF1A-209ENST00000556827 G3V3G9 751 aa14.09□□□□□ -0.15
HIF1A-209ENST00000556827 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
HIF1A-209ENST00000556827 SLAIN1Q8ND83 568 aa14.09□□□□□ -0.15
HIF1A-209ENST00000556827 DPY19L2Q6NUT2 758 aa14.08□□□□□ -0.16
HIF1A-209ENST00000556827 SOX12O15370 315 aa14.07□□□□□ -0.16
HIF1A-209ENST00000556827 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.07□□□□□ -0.16
HIF1A-209ENST00000556827 PHF8Q9UPP1 1060 aa14.02□□□□□ -0.17
HIF1A-209ENST00000556827 BOLA1Q9Y3E2 137 aa14.02□□□□□ -0.17
HIF1A-209ENST00000556827 NLRP6P59044 892 aa13.98□□□□□ -0.17
HIF1A-209ENST00000556827 FAM163AQ96GL9 167 aaPredicted RBP13.95□□□□□ -0.18
HIF1A-209ENST00000556827 MS4A4AQ96JQ5 239 aa13.95□□□□□ -0.18
HIF1A-209ENST00000556827 MFRPQ9BY79 579 aa13.92□□□□□ -0.18
HIF1A-209ENST00000556827 CHGAP10645 457 aaKnown RBP13.91□□□□□ -0.18
HIF1A-209ENST00000556827 HS6ST3Q8IZP7 471 aa13.91□□□□□ -0.18
HIF1A-209ENST00000556827 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
HIF1A-209ENST00000556827 MICALL2Q8IY33 904 aa13.89□□□□□ -0.19
HIF1A-209ENST00000556827 TMEM121BQ9BXQ6 578 aaPredicted RBP13.88□□□□□ -0.19
HIF1A-209ENST00000556827 DCAF8L2P0C7V8 631 aa13.87□□□□□ -0.19
HIF1A-209ENST00000556827 SNPHO15079 494 aa13.86□□□□□ -0.19
HIF1A-209ENST00000556827 RTN4Q9NQC3 1192 aaKnown RBP13.86□□□□□ -0.19
HIF1A-209ENST00000556827 POTEMA6NI47 508 aa13.83□□□□□ -0.2
HIF1A-209ENST00000556827 LCE2DQ5TA82 110 aaPredicted RBP13.82□□□□□ -0.2
HIF1A-209ENST00000556827 POTEGQ6S5H5 508 aa13.82□□□□□ -0.2
HIF1A-209ENST00000556827 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
HIF1A-209ENST00000556827 ST18O60284 1047 aa13.77□□□□□ -0.21
HIF1A-209ENST00000556827 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
HIF1A-209ENST00000556827 TMEM92Q6UXU6 159 aa13.72□□□□□ -0.21
HIF1A-209ENST00000556827 PPP1R37O75864 691 aa13.69□□□□□ -0.22
HIF1A-209ENST00000556827 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
HIF1A-209ENST00000556827 NKX1-1Q15270 411 aaPredicted RBP13.68□□□□□ -0.22
HIF1A-209ENST00000556827 RYDENQ9NUL5 291 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms