RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 POTEJP0CG39 1038 aa8.97□□□□□ -0.97
KTN1-220ENST00000555172 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
KTN1-220ENST00000555172 C7P10643 843 aa8.93□□□□□ -0.98
KTN1-220ENST00000555172 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
KTN1-220ENST00000555172 ATMINO43313 823 aaPredicted RBP8.93□□□□□ -0.98
KTN1-220ENST00000555172 SLC39A7Q92504 469 aa8.93□□□□□ -0.98
KTN1-220ENST00000555172 TSPYL2Q9H2G4 693 aaPredicted RBP8.93□□□□□ -0.98
KTN1-220ENST00000555172 FAM163AQ96GL9 167 aaPredicted RBP8.92□□□□□ -0.98
KTN1-220ENST00000555172 ASTLQ6HA08 431 aaPredicted RBP8.91□□□□□ -0.98
KTN1-220ENST00000555172 SCUBE2Q9NQ36 999 aa8.91□□□□□ -0.98
KTN1-220ENST00000555172 ATN1P54259 1190 aaPredicted RBP8.86□□□□□ -0.99
KTN1-220ENST00000555172 TRPC6Q9Y210 931 aa8.86□□□□□ -0.99
KTN1-220ENST00000555172 LCE2DQ5TA82 110 aaPredicted RBP8.86□□□□□ -0.99
KTN1-220ENST00000555172 CCDC61Q9Y6R9 512 aa8.84□□□□□ -0.99
KTN1-220ENST00000555172 POTEFA5A3E0 1075 aa8.82□□□□□ -1
KTN1-220ENST00000555172 KIF12Q96FN5 646 aa8.81□□□□□ -1
KTN1-220ENST00000555172 CDAN1Q8IWY9 1227 aa8.81□□□□□ -1
KTN1-220ENST00000555172 BMP2KQ9NSY1 1161 aaPredicted RBP8.79□□□□□ -1
KTN1-220ENST00000555172 MAP3K13O43283 966 aa8.78□□□□□ -1
KTN1-220ENST00000555172 PROM2Q8N271 834 aa8.78□□□□□ -1
KTN1-220ENST00000555172 SLC24A1O60721 1099 aa8.77□□□□□ -1
KTN1-220ENST00000555172 RASEFQ8IZ41 740 aa8.76□□□□□ -1.01
KTN1-220ENST00000555172 COLQQ9Y215 455 aaPredicted RBP8.73□□□□□ -1.01
KTN1-220ENST00000555172 MIER1Q8N108 512 aa8.73□□□□□ -1.01
KTN1-220ENST00000555172 TTLL13PA6NNM8 815 aa8.69□□□□□ -1.02
KTN1-220ENST00000555172 TIE1P35590 1138 aa8.68□□□□□ -1.02
KTN1-220ENST00000555172 SEC24BO95487 1268 aa8.66□□□□□ -1.02
KTN1-220ENST00000555172 TRIM35Q9UPQ4 493 aa8.64□□□□□ -1.03
KTN1-220ENST00000555172 MMRN1Q13201 1228 aa8.64□□□□□ -1.03
KTN1-220ENST00000555172 PLEKHG5O94827 1062 aa8.62□□□□□ -1.03
KTN1-220ENST00000555172 PCDHB13Q9Y5F0 798 aa8.62□□□□□ -1.03
KTN1-220ENST00000555172 PLCD3Q8N3E9 789 aa8.61□□□□□ -1.03
KTN1-220ENST00000555172 IFNL1Q8IU54 200 aa8.59□□□□□ -1.03
KTN1-220ENST00000555172 SPNS2Q8IVW8 549 aa8.59□□□□□ -1.03
KTN1-220ENST00000555172 NUBP1P53384 320 aa8.58□□□□□ -1.04
KTN1-220ENST00000555172 SLAIN1Q8ND83 568 aa8.57□□□□□ -1.04
KTN1-220ENST00000555172 ST18O60284 1047 aa8.55□□□□□ -1.04
KTN1-220ENST00000555172 TMEM106CQ9BVX2 250 aa8.55□□□□□ -1.04
KTN1-220ENST00000555172 IER5LQ5T953 404 aa8.53□□□□□ -1.04
KTN1-220ENST00000555172 TMEM121BQ9BXQ6 578 aaPredicted RBP8.53□□□□□ -1.04
KTN1-220ENST00000555172 SGIP1Q9BQI5 828 aa8.52□□□□□ -1.05
KTN1-220ENST00000555172 PLCG2P16885 1265 aa8.49□□□□□ -1.05
KTN1-220ENST00000555172 IRX5P78411 483 aaPredicted RBP8.48□□□□□ -1.05
KTN1-220ENST00000555172 SNPHO15079 494 aa8.48□□□□□ -1.05
KTN1-220ENST00000555172 FAM212AQ96EL1 285 aa8.47□□□□□ -1.05
KTN1-220ENST00000555172 PYGBP11216 843 aa8.46□□□□□ -1.05
KTN1-220ENST00000555172 PCDHB8Q9UN66 801 aa8.45□□□□□ -1.06
KTN1-220ENST00000555172 ZBTB47Q9UFB7 747 aaPredicted RBP8.44□□□□□ -1.06
KTN1-220ENST00000555172 DCAF8Q5TAQ9 597 aa8.43□□□□□ -1.06
KTN1-220ENST00000555172 MARVELD3Q96A59 401 aa8.43□□□□□ -1.06
KTN1-220ENST00000555172 FKBP8Q14318 412 aa8.41□□□□□ -1.06
KTN1-220ENST00000555172 OCEL1Q9H607 264 aa8.41□□□□□ -1.06
KTN1-220ENST00000555172 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.36□□□□□ -1.07
KTN1-220ENST00000555172 PDCD7Q8N8D1 485 aaKnown RBP8.33□□□□□ -1.08
KTN1-220ENST00000555172 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
KTN1-220ENST00000555172 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
KTN1-220ENST00000555172 RTN4Q9NQC3 1192 aaKnown RBP8.3□□□□□ -1.08
KTN1-220ENST00000555172 EMP3P54852 163 aa8.28□□□□□ -1.08
KTN1-220ENST00000555172 C3orf67Q6ZVT6 689 aa8.26□□□□□ -1.09
KTN1-220ENST00000555172 DPY19L2Q6NUT2 758 aa8.26□□□□□ -1.09
KTN1-220ENST00000555172 FAM205CA6NFA0 338 aa8.25□□□□□ -1.09
KTN1-220ENST00000555172 MKRN3Q13064 507 aaKnown RBP8.25□□□□□ -1.09
KTN1-220ENST00000555172 KLHL34Q8N239 644 aa8.25□□□□□ -1.09
KTN1-220ENST00000555172 GOLGA2Q08379 1002 aa8.24□□□□□ -1.09
KTN1-220ENST00000555172 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
KTN1-220ENST00000555172 KRTAP3-2Q9BYR7 98 aa8.24□□□□□ -1.09
KTN1-220ENST00000555172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.24□□□□□ -1.092e-8■■■■□ 20.5
KTN1-220ENST00000555172 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
KTN1-220ENST00000555172 PSEN1P49768 467 aa8.22□□□□□ -1.09
KTN1-220ENST00000555172 ZNF467Q7Z7K2 595 aaPredicted RBP8.21□□□□□ -1.09
KTN1-220ENST00000555172 L3MBTL3Q96JM7 780 aaPredicted RBP8.21□□□□□ -1.09
KTN1-220ENST00000555172 GSE1Q14687 1217 aa8.19□□□□□ -1.1
KTN1-220ENST00000555172 AMER1Q5JTC6 1135 aaPredicted RBP8.19□□□□□ -1.1
KTN1-220ENST00000555172 FBXO3Q9UK99 471 aa8.19□□□□□ -1.1
KTN1-220ENST00000555172 VASPP50552 380 aaPredicted RBP8.18□□□□□ -1.1
KTN1-220ENST00000555172 CHRM1P11229 460 aaPredicted RBP8.15□□□□□ -1.1
KTN1-220ENST00000555172 CABP2Q9NPB3 220 aa8.15□□□□□ -1.1
KTN1-220ENST00000555172 HOXB3P14651 431 aaPredicted RBP8.15□□□□□ -1.11
KTN1-220ENST00000555172 ILDR1Q86SU0 546 aaPredicted RBP8.14□□□□□ -1.11
KTN1-220ENST00000555172 RNF166Q96A37 237 aaPredicted RBP8.13□□□□□ -1.11
KTN1-220ENST00000555172 PDAP1Q13442 181 aaKnown RBP8.11□□□□□ -1.11
KTN1-220ENST00000555172 BOLA1Q9Y3E2 137 aa8.11□□□□□ -1.11
KTN1-220ENST00000555172 CIZ1Q9ULV3 898 aaPredicted RBP8.1□□□□□ -1.11
KTN1-220ENST00000555172 ZNF710Q8N1W2 664 aa8.07□□□□□ -1.12
KTN1-220ENST00000555172 ERBB3P21860 1342 aa8.06□□□□□ -1.12
KTN1-220ENST00000555172 G3V3G9 751 aa8.06□□□□□ -1.12
KTN1-220ENST00000555172 HOXB1P14653 301 aaPredicted RBP8.06□□□□□ -1.12
KTN1-220ENST00000555172 IFNLR1Q8IU57 520 aaPredicted RBP8.06□□□□□ -1.12
KTN1-220ENST00000555172 MYT1LQ9UL68 1186 aa8.06□□□□□ -1.12
KTN1-220ENST00000555172 PTGER2P43116 358 aa8.03□□□□□ -1.12
KTN1-220ENST00000555172 EFCAB3Q8N7B9 438 aa8.03□□□□□ -1.12
KTN1-220ENST00000555172 VARS2Q5ST30 1063 aaKnown RBP8.02□□□□□ -1.12
KTN1-220ENST00000555172 TMEM92Q6UXU6 159 aa8.02□□□□□ -1.12
KTN1-220ENST00000555172 SPOCK2Q92563 424 aa8.02□□□□□ -1.12
KTN1-220ENST00000555172 DOK7Q18PE1 504 aa8.01□□□□□ -1.13
KTN1-220ENST00000555172 MICALL2Q8IY33 904 aa7.96□□□□□ -1.14
KTN1-220ENST00000555172 GPR153Q6NV75 609 aa7.93□□□□□ -1.14
KTN1-220ENST00000555172 RIMBP2O15034 1052 aa7.93□□□□□ -1.14
KTN1-220ENST00000555172 KHSRPQ92945 711 aaKnown RBP eCLIP7.93□□□□□ -1.149e-9■■■■■ 27.2
KTN1-220ENST00000555172 MS4A4AQ96JQ5 239 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms