RNA–Protein interactions for RNA: ENST00000553595.5

RAD51B-216, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-216ENST00000553595 SP7Q8TDD2 431 aaPredicted RBP10.71□□□□□ -0.69
RAD51B-216ENST00000553595 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
RAD51B-216ENST00000553595 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
RAD51B-216ENST00000553595 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
RAD51B-216ENST00000553595 PAK3O75914 559 aaPredicted RBP10.61□□□□□ -0.71
RAD51B-216ENST00000553595 IFNLR1Q8IU57 520 aaPredicted RBP10.61□□□□□ -0.71
RAD51B-216ENST00000553595 NUBP1P53384 320 aa10.6□□□□□ -0.71
RAD51B-216ENST00000553595 RASEFQ8IZ41 740 aa10.6□□□□□ -0.71
RAD51B-216ENST00000553595 TSPYL2Q9H2G4 693 aaPredicted RBP10.59□□□□□ -0.71
RAD51B-216ENST00000553595 ZNF579Q8NAF0 562 aaKnown RBP10.57□□□□□ -0.72
RAD51B-216ENST00000553595 EIF4G1Q04637 1599 aaKnown RBP10.56□□□□□ -0.72
RAD51B-216ENST00000553595 ERCC6Q03468 1493 aa10.55□□□□□ -0.72
RAD51B-216ENST00000553595 GABBR2O75899 941 aa10.55□□□□□ -0.72
RAD51B-216ENST00000553595 PHF12Q96QT6 1004 aa10.54□□□□□ -0.72
RAD51B-216ENST00000553595 CCDC61Q9Y6R9 512 aa10.52□□□□□ -0.73
RAD51B-216ENST00000553595 NACADO15069 1562 aa10.51□□□□□ -0.73
RAD51B-216ENST00000553595 SPOCK2Q92563 424 aa10.49□□□□□ -0.73
RAD51B-216ENST00000553595 FAM212AQ96EL1 285 aa10.49□□□□□ -0.73
RAD51B-216ENST00000553595 CLCN6P51797 869 aa10.47□□□□□ -0.73
RAD51B-216ENST00000553595 DCAF8Q5TAQ9 597 aa10.47□□□□□ -0.73
RAD51B-216ENST00000553595 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
RAD51B-216ENST00000553595 KIF12Q96FN5 646 aa10.43□□□□□ -0.74
RAD51B-216ENST00000553595 DCAF8L2P0C7V8 631 aa10.4□□□□□ -0.74
RAD51B-216ENST00000553595 GSE1Q14687 1217 aa10.4□□□□□ -0.74
RAD51B-216ENST00000553595 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
RAD51B-216ENST00000553595 MAP3K13O43283 966 aa10.39□□□□□ -0.75
RAD51B-216ENST00000553595 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
RAD51B-216ENST00000553595 PYGBP11216 843 aa10.37□□□□□ -0.75
RAD51B-216ENST00000553595 POTEIP0CG38 1075 aa10.34□□□□□ -0.75
RAD51B-216ENST00000553595 PCDHB13Q9Y5F0 798 aa10.34□□□□□ -0.75
RAD51B-216ENST00000553595 DCBLD2Q96PD2 775 aa10.33□□□□□ -0.76
RAD51B-216ENST00000553595 RIMBP3CA6NJZ7 1639 aa10.33□□□□□ -0.76
RAD51B-216ENST00000553595 RIMBP3BA6NNM3 1639 aa10.33□□□□□ -0.76
RAD51B-216ENST00000553595 RIMBP3Q9UFD9 1639 aa10.33□□□□□ -0.76
RAD51B-216ENST00000553595 SGIP1Q9BQI5 828 aa10.32□□□□□ -0.76
RAD51B-216ENST00000553595 TRPC6Q9Y210 931 aa10.3□□□□□ -0.76
RAD51B-216ENST00000553595 IFNL1Q8IU54 200 aa10.29□□□□□ -0.76
RAD51B-216ENST00000553595 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
RAD51B-216ENST00000553595 PCDHB8Q9UN66 801 aa10.25□□□□□ -0.77
RAD51B-216ENST00000553595 THOC2Q8NI27 1593 aaKnown RBP10.24□□□□□ -0.77
RAD51B-216ENST00000553595 ATMINO43313 823 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-216ENST00000553595 ASTLQ6HA08 431 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-216ENST00000553595 BMP2KQ9NSY1 1161 aaPredicted RBP10.23□□□□□ -0.77
RAD51B-216ENST00000553595 TIE1P35590 1138 aa10.22□□□□□ -0.77
RAD51B-216ENST00000553595 SHROOM4Q9ULL8 1493 aa10.22□□□□□ -0.77
RAD51B-216ENST00000553595 BAZ1AQ9NRL2 1556 aaPredicted RBP10.22□□□□□ -0.77
RAD51B-216ENST00000553595 ZNF467Q7Z7K2 595 aaPredicted RBP10.21□□□□□ -0.77
RAD51B-216ENST00000553595 PELP1Q8IZL8 1130 aaKnown RBP10.21□□□□□ -0.77
RAD51B-216ENST00000553595 LMTK3Q96Q04 1460 aa10.21□□□□□ -0.78
RAD51B-216ENST00000553595 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
RAD51B-216ENST00000553595 TTLL13PA6NNM8 815 aa10.19□□□□□ -0.78
RAD51B-216ENST00000553595 SOCS7O14512 581 aa10.18□□□□□ -0.78
RAD51B-216ENST00000553595 PKD2Q13563 968 aa10.18□□□□□ -0.78
RAD51B-216ENST00000553595 ILDR2Q71H61 639 aa10.18□□□□□ -0.78
RAD51B-216ENST00000553595 NESP48681 1621 aa10.18□□□□□ -0.78
RAD51B-216ENST00000553595 CYB5RLQ6IPT4 315 aa10.17□□□□□ -0.78
RAD51B-216ENST00000553595 TMEM106CQ9BVX2 250 aa10.16□□□□□ -0.78
RAD51B-216ENST00000553595 ECM2O94769 699 aaPredicted RBP10.14□□□□□ -0.79
RAD51B-216ENST00000553595 RNF25Q96BH1 459 aaPredicted RBP10.14□□□□□ -0.79
RAD51B-216ENST00000553595 PSEN1P49768 467 aa10.12□□□□□ -0.79
RAD51B-216ENST00000553595 TRIM35Q9UPQ4 493 aa10.12□□□□□ -0.79
RAD51B-216ENST00000553595 ARHGEF11O15085 1522 aa10.12□□□□□ -0.79
RAD51B-216ENST00000553595 PDAP1Q13442 181 aaKnown RBP10.11□□□□□ -0.79
RAD51B-216ENST00000553595 SLC39A7Q92504 469 aa10.11□□□□□ -0.79
RAD51B-216ENST00000553595 RIOK3O14730 519 aaKnown RBP10.09□□□□□ -0.79
RAD51B-216ENST00000553595 METRNQ9UJH8 293 aa10.09□□□□□ -0.79
RAD51B-216ENST00000553595 SMARCA2P51531 1590 aa10.09□□□□□ -0.79
RAD51B-216ENST00000553595 C7P10643 843 aa10.08□□□□□ -0.8
RAD51B-216ENST00000553595 RGL2O15211 777 aa10.06□□□□□ -0.8
RAD51B-216ENST00000553595 LHX8Q68G74 356 aa10.05□□□□□ -0.8
RAD51B-216ENST00000553595 POTEFA5A3E0 1075 aa10.03□□□□□ -0.8
RAD51B-216ENST00000553595 VGFO15240 615 aaPredicted RBP10.03□□□□□ -0.8
RAD51B-216ENST00000553595 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.02□□□□□ -0.81
RAD51B-216ENST00000553595 IER5LQ5T953 404 aa10.02□□□□□ -0.81
RAD51B-216ENST00000553595 FBXO41Q8TF61 875 aa10.02□□□□□ -0.81
RAD51B-216ENST00000553595 ZFP91Q96JP5 570 aaPredicted RBP10.02□□□□□ -0.81
RAD51B-216ENST00000553595 POTEB2H3BUK9 544 aa10.01□□□□□ -0.81
RAD51B-216ENST00000553595 COLQQ9Y215 455 aaPredicted RBP10.01□□□□□ -0.81
RAD51B-216ENST00000553595 GOLGA2Q08379 1002 aa10□□□□□ -0.81
RAD51B-216ENST00000553595 CABP2Q9NPB3 220 aa10□□□□□ -0.81
RAD51B-216ENST00000553595 SEC24BO95487 1268 aa9.99□□□□□ -0.81
RAD51B-216ENST00000553595 KIF21AQ7Z4S6 1674 aa9.99□□□□□ -0.81
RAD51B-216ENST00000553595 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
RAD51B-216ENST00000553595 IRX5P78411 483 aaPredicted RBP9.97□□□□□ -0.81
RAD51B-216ENST00000553595 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
RAD51B-216ENST00000553595 TAOK2Q9UL54 1235 aa9.97□□□□□ -0.81
RAD51B-216ENST00000553595 ARAP1Q96P48 1450 aa9.97□□□□□ -0.81
RAD51B-216ENST00000553595 KDM4FA0A1W2PPD8 638 aa9.96□□□□□ -0.82
RAD51B-216ENST00000553595 POTEJP0CG39 1038 aa9.94□□□□□ -0.82
RAD51B-216ENST00000553595 PLCG2P16885 1265 aa9.94□□□□□ -0.82
RAD51B-216ENST00000553595 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
RAD51B-216ENST00000553595 BCL11BQ9C0K0 894 aaPredicted RBP9.93□□□□□ -0.82
RAD51B-216ENST00000553595 OCEL1Q9H607 264 aa9.93□□□□□ -0.82
RAD51B-216ENST00000553595 STK25O00506 426 aa9.92□□□□□ -0.82
RAD51B-216ENST00000553595 STK24Q9Y6E0 443 aa9.92□□□□□ -0.82
RAD51B-216ENST00000553595 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.91□□□□□ -0.827e-7■■□□□ 12.4
RAD51B-216ENST00000553595 PDCD7Q8N8D1 485 aaKnown RBP9.9□□□□□ -0.82
RAD51B-216ENST00000553595 DISP3Q9P2K9 1392 aa9.89□□□□□ -0.83
RAD51B-216ENST00000553595 AMER1Q5JTC6 1135 aaPredicted RBP9.89□□□□□ -0.83
RAD51B-216ENST00000553595 OTUD5Q96G74 571 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms