RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 MRC2Q9UBG0 1479 aa15.42■□□□□ 0.06
LETMD1-225ENST00000550715 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
LETMD1-225ENST00000550715 STAG3Q9UJ98 1225 aa15.39■□□□□ 0.05
LETMD1-225ENST00000550715 WDR62O43379 1518 aa15.38■□□□□ 0.05
LETMD1-225ENST00000550715 ARHGEF11O15085 1522 aa15.38■□□□□ 0.05
LETMD1-225ENST00000550715 SMARCA4P51532 1647 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 PLCD3Q8N3E9 789 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 CADPSQ9ULU8 1353 aa15.32■□□□□ 0.04
LETMD1-225ENST00000550715 ILDR1Q86SU0 546 aaPredicted RBP15.31■□□□□ 0.04
LETMD1-225ENST00000550715 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
LETMD1-225ENST00000550715 MIER1Q8N108 512 aa15.26■□□□□ 0.03
LETMD1-225ENST00000550715 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
LETMD1-225ENST00000550715 AKT1S1Q96B36 256 aa15.2■□□□□ 0.02
LETMD1-225ENST00000550715 SLC24A1O60721 1099 aa15.19■□□□□ 0.02
LETMD1-225ENST00000550715 ARAP1Q96P48 1450 aa15.19■□□□□ 0.02
LETMD1-225ENST00000550715 PKD2Q13563 968 aa15.17■□□□□ 0.02
LETMD1-225ENST00000550715 CEP164Q9UPV0 1460 aa15.16■□□□□ 0.02
LETMD1-225ENST00000550715 PEG3Q9GZU2 1588 aa15.15■□□□□ 0.02
LETMD1-225ENST00000550715 SPDYE1Q8NFV5 336 aaPredicted RBP15.12■□□□□ 0.01
LETMD1-225ENST00000550715 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
LETMD1-225ENST00000550715 CLEC11AQ9Y240 323 aa15.11■□□□□ 0.01
LETMD1-225ENST00000550715 FANCD2Q9BXW9 1451 aa15.11■□□□□ 0.01
LETMD1-225ENST00000550715 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
LETMD1-225ENST00000550715 URB2Q14146 1524 aaKnown RBP15.07■□□□□ 0
LETMD1-225ENST00000550715 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
LETMD1-225ENST00000550715 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
LETMD1-225ENST00000550715 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
LETMD1-225ENST00000550715 ECM2O94769 699 aaPredicted RBP15.01□□□□□ -0.01
LETMD1-225ENST00000550715 PRR29P0C7W0 189 aa14.98□□□□□ -0.01
LETMD1-225ENST00000550715 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.01
LETMD1-225ENST00000550715 RSF1Q96T23 1441 aaPredicted RBP14.95□□□□□ -0.02
LETMD1-225ENST00000550715 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
LETMD1-225ENST00000550715 CREBZFQ9NS37 354 aa14.93□□□□□ -0.02
LETMD1-225ENST00000550715 CFTRP13569 1480 aa14.91□□□□□ -0.02
LETMD1-225ENST00000550715 IFT140Q96RY7 1462 aa14.91□□□□□ -0.02
LETMD1-225ENST00000550715 CHD1O14646 1710 aa14.88□□□□□ -0.03
LETMD1-225ENST00000550715 RGL2O15211 777 aa14.87□□□□□ -0.03
LETMD1-225ENST00000550715 AQRO60306 1485 aaKnown RBP eCLIP14.84□□□□□ -0.038e-7■□□□□ 10.8
LETMD1-225ENST00000550715 KDM4FA0A1W2PPD8 638 aa14.83□□□□□ -0.04
LETMD1-225ENST00000550715 NUBP1P53384 320 aa14.82□□□□□ -0.04
LETMD1-225ENST00000550715 EIF4G3O43432 1585 aaKnown RBP14.81□□□□□ -0.04
LETMD1-225ENST00000550715 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
LETMD1-225ENST00000550715 WIZO95785 1651 aa14.77□□□□□ -0.04
LETMD1-225ENST00000550715 PLCB2Q00722 1185 aa14.77□□□□□ -0.05
LETMD1-225ENST00000550715 GSE1Q14687 1217 aa14.74□□□□□ -0.05
LETMD1-225ENST00000550715 DCAF8Q5TAQ9 597 aa14.74□□□□□ -0.05
LETMD1-225ENST00000550715 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
LETMD1-225ENST00000550715 CHADLQ6NUI6 762 aa14.73□□□□□ -0.05
LETMD1-225ENST00000550715 TOPBP1Q92547 1522 aa14.71□□□□□ -0.05
LETMD1-225ENST00000550715 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
LETMD1-225ENST00000550715 FAM212AQ96EL1 285 aa14.7□□□□□ -0.06
LETMD1-225ENST00000550715 CLASP1Q7Z460 1538 aa14.7□□□□□ -0.06
LETMD1-225ENST00000550715 GAPVD1Q14C86 1478 aa14.68□□□□□ -0.06
LETMD1-225ENST00000550715 CHMP7Q8WUX9 453 aaPredicted RBP14.67□□□□□ -0.06
LETMD1-225ENST00000550715 RNF25Q96BH1 459 aaPredicted RBP14.65□□□□□ -0.06
LETMD1-225ENST00000550715 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
LETMD1-225ENST00000550715 TDRD9Q8NDG6 1382 aaKnown RBP14.63□□□□□ -0.07
LETMD1-225ENST00000550715 HAP1P54257 671 aaPredicted RBP14.63□□□□□ -0.07
LETMD1-225ENST00000550715 CHGAP10645 457 aaKnown RBP14.62□□□□□ -0.07
LETMD1-225ENST00000550715 BBXQ8WY36 941 aaPredicted RBP14.62□□□□□ -0.07
LETMD1-225ENST00000550715 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.59□□□□□ -0.07
LETMD1-225ENST00000550715 SNAPC4Q5SXM2 1469 aa14.57□□□□□ -0.08
LETMD1-225ENST00000550715 SYNJ1O43426 1573 aa14.57□□□□□ -0.08
LETMD1-225ENST00000550715 PRKAR2AP13861 404 aaKnown RBP14.57□□□□□ -0.08
LETMD1-225ENST00000550715 ABCC8Q09428 1581 aa14.56□□□□□ -0.08
LETMD1-225ENST00000550715 FARP1Q9Y4F1 1045 aaPredicted RBP14.55□□□□□ -0.08
LETMD1-225ENST00000550715 RAD54L2Q9Y4B4 1467 aa14.55□□□□□ -0.08
LETMD1-225ENST00000550715 PAXIP1Q6ZW49 1069 aaPredicted RBP14.54□□□□□ -0.08
LETMD1-225ENST00000550715 FBXO41Q8TF61 875 aa14.54□□□□□ -0.08
LETMD1-225ENST00000550715 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
LETMD1-225ENST00000550715 RIOK3O14730 519 aaKnown RBP14.53□□□□□ -0.08
LETMD1-225ENST00000550715 PYGBP11216 843 aa14.53□□□□□ -0.08
LETMD1-225ENST00000550715 CFAP44Q96MT7 982 aa14.53□□□□□ -0.08
LETMD1-225ENST00000550715 DNMBPQ6XZF7 1577 aa14.52□□□□□ -0.08
LETMD1-225ENST00000550715 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
LETMD1-225ENST00000550715 FXR2P51116 673 aaKnown RBP eCLIP14.51□□□□□ -0.09
LETMD1-225ENST00000550715 FAM69CQ0P6D2 419 aa14.51□□□□□ -0.09
LETMD1-225ENST00000550715 TSPYL2Q9H2G4 693 aaPredicted RBP14.51□□□□□ -0.09
LETMD1-225ENST00000550715 PRDM2Q13029 1718 aa14.51□□□□□ -0.09
LETMD1-225ENST00000550715 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
LETMD1-225ENST00000550715 CHRDL2Q6WN34 429 aa14.5□□□□□ -0.09
LETMD1-225ENST00000550715 HS6ST3Q8IZP7 471 aa14.49□□□□□ -0.09
LETMD1-225ENST00000550715 SOGA1O94964 1423 aa14.49□□□□□ -0.09
LETMD1-225ENST00000550715 CHRM1P11229 460 aaPredicted RBP14.46□□□□□ -0.09
LETMD1-225ENST00000550715 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.1
LETMD1-225ENST00000550715 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
LETMD1-225ENST00000550715 MAGI1Q96QZ7 1491 aaPredicted RBP14.44□□□□□ -0.1
LETMD1-225ENST00000550715 PIP4P2Q8N4L2 257 aa14.44□□□□□ -0.1
LETMD1-225ENST00000550715 HECW2Q9P2P5 1572 aa14.43□□□□□ -0.1
LETMD1-225ENST00000550715 VGFO15240 615 aaPredicted RBP14.41□□□□□ -0.1
LETMD1-225ENST00000550715 SPRYD3Q8NCJ5 442 aa14.41□□□□□ -0.1
LETMD1-225ENST00000550715 TAOK2Q9UL54 1235 aa14.41□□□□□ -0.1
LETMD1-225ENST00000550715 CCDC88BA6NC98 1476 aa14.41□□□□□ -0.1
LETMD1-225ENST00000550715 GRIN2BQ13224 1484 aa14.39□□□□□ -0.11
LETMD1-225ENST00000550715 LMTK3Q96Q04 1460 aa14.39□□□□□ -0.11
LETMD1-225ENST00000550715 STK25O00506 426 aa14.39□□□□□ -0.11
LETMD1-225ENST00000550715 ABCC10Q5T3U5 1492 aa14.38□□□□□ -0.11
LETMD1-225ENST00000550715 ILDR2Q71H61 639 aa14.37□□□□□ -0.11
LETMD1-225ENST00000550715 KDM6BO15054 1643 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms