RNA–Protein interactions for RNA: ENST00000550337.1

LINC02402-201, Transcript of long intergenic non-protein coding RNA 2402, humanhuman

TSL 1 (best) BASIC

Gene LINC02402, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02402-201ENST00000550337 FKBP8Q14318 412 aa13.08□□□□□ -0.32
LINC02402-201ENST00000550337 C7P10643 843 aa13.07□□□□□ -0.32
LINC02402-201ENST00000550337 SPNS2Q8IVW8 549 aa13.07□□□□□ -0.32
LINC02402-201ENST00000550337 SLC39A7Q92504 469 aa13.06□□□□□ -0.32
LINC02402-201ENST00000550337 PHF12Q96QT6 1004 aa13.05□□□□□ -0.32
LINC02402-201ENST00000550337 ASTLQ6HA08 431 aaPredicted RBP13.03□□□□□ -0.32
LINC02402-201ENST00000550337 ATMINO43313 823 aaPredicted RBP12.97□□□□□ -0.33
LINC02402-201ENST00000550337 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
LINC02402-201ENST00000550337 POTEFA5A3E0 1075 aa12.85□□□□□ -0.35
LINC02402-201ENST00000550337 ST18O60284 1047 aa12.83□□□□□ -0.36
LINC02402-201ENST00000550337 MS4A3Q96HJ5 214 aa12.83□□□□□ -0.36
LINC02402-201ENST00000550337 CREBZFQ9NS37 354 aa12.83□□□□□ -0.36
LINC02402-201ENST00000550337 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
LINC02402-201ENST00000550337 ATN1P54259 1190 aaPredicted RBP12.75□□□□□ -0.37
LINC02402-201ENST00000550337 PROM2Q8N271 834 aa12.75□□□□□ -0.37
LINC02402-201ENST00000550337 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
LINC02402-201ENST00000550337 COLQQ9Y215 455 aaPredicted RBP12.57□□□□□ -0.4
LINC02402-201ENST00000550337 SLAIN1Q8ND83 568 aa12.55□□□□□ -0.4
LINC02402-201ENST00000550337 BMP2KQ9NSY1 1161 aaPredicted RBP12.51□□□□□ -0.41
LINC02402-201ENST00000550337 TMEM121BQ9BXQ6 578 aaPredicted RBP12.5□□□□□ -0.41
LINC02402-201ENST00000550337 MARVELD3Q96A59 401 aa12.48□□□□□ -0.41
LINC02402-201ENST00000550337 TRPC6Q9Y210 931 aa12.45□□□□□ -0.42
LINC02402-201ENST00000550337 SEC24BO95487 1268 aa12.44□□□□□ -0.42
LINC02402-201ENST00000550337 NPM1P06748 294 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC02402-201ENST00000550337 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
LINC02402-201ENST00000550337 KRTAP3-3Q9BYR6 98 aa12.44□□□□□ -0.42
LINC02402-201ENST00000550337 KRTAP3-2Q9BYR7 98 aa12.44□□□□□ -0.42
LINC02402-201ENST00000550337 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
LINC02402-201ENST00000550337 STAG3Q9UJ98 1225 aa12.39□□□□□ -0.43
LINC02402-201ENST00000550337 TIE1P35590 1138 aa12.32□□□□□ -0.44
LINC02402-201ENST00000550337 KIF12Q96FN5 646 aa12.3□□□□□ -0.44
LINC02402-201ENST00000550337 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
LINC02402-201ENST00000550337 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
LINC02402-201ENST00000550337 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
LINC02402-201ENST00000550337 TTLL13PA6NNM8 815 aa12.26□□□□□ -0.45
LINC02402-201ENST00000550337 TSPYL2Q9H2G4 693 aaPredicted RBP12.25□□□□□ -0.45
LINC02402-201ENST00000550337 IFNLR1Q8IU57 520 aaPredicted RBP12.23□□□□□ -0.45
LINC02402-201ENST00000550337 AMER1Q5JTC6 1135 aaPredicted RBP12.22□□□□□ -0.45
LINC02402-201ENST00000550337 IER5LQ5T953 404 aa12.22□□□□□ -0.45
LINC02402-201ENST00000550337 SNPHO15079 494 aa12.21□□□□□ -0.45
LINC02402-201ENST00000550337 EMP3P54852 163 aa12.21□□□□□ -0.45
LINC02402-201ENST00000550337 PLCD3Q8N3E9 789 aa12.21□□□□□ -0.45
LINC02402-201ENST00000550337 HS3ST6Q96QI5 342 aa12.2□□□□□ -0.46
LINC02402-201ENST00000550337 MIER1Q8N108 512 aa12.18□□□□□ -0.46
LINC02402-201ENST00000550337 RTN4Q9NQC3 1192 aaKnown RBP12.18□□□□□ -0.46
LINC02402-201ENST00000550337 TRIM35Q9UPQ4 493 aa12.18□□□□□ -0.46
LINC02402-201ENST00000550337 MAP3K13O43283 966 aa12.15□□□□□ -0.46
LINC02402-201ENST00000550337 RNF166Q96A37 237 aaPredicted RBP12.14□□□□□ -0.47
LINC02402-201ENST00000550337 FAM205CA6NFA0 338 aa12.13□□□□□ -0.47
LINC02402-201ENST00000550337 PLEKHG5O94827 1062 aa12.13□□□□□ -0.47
LINC02402-201ENST00000550337 KLHL34Q8N239 644 aa12.12□□□□□ -0.47
LINC02402-201ENST00000550337 ZBTB47Q9UFB7 747 aaPredicted RBP12.08□□□□□ -0.48
LINC02402-201ENST00000550337 SPOCK2Q92563 424 aa12.06□□□□□ -0.48
LINC02402-201ENST00000550337 PLCG2P16885 1265 aa12.03□□□□□ -0.48
LINC02402-201ENST00000550337 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.98□□□□□ -0.49
LINC02402-201ENST00000550337 IRX5P78411 483 aaPredicted RBP11.96□□□□□ -0.49
LINC02402-201ENST00000550337 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
LINC02402-201ENST00000550337 PKD2Q13563 968 aa11.9□□□□□ -0.5
LINC02402-201ENST00000550337 NUBP1P53384 320 aa11.89□□□□□ -0.51
LINC02402-201ENST00000550337 CIZ1Q9ULV3 898 aaPredicted RBP11.83□□□□□ -0.52
LINC02402-201ENST00000550337 RASEFQ8IZ41 740 aa11.82□□□□□ -0.52
LINC02402-201ENST00000550337 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
LINC02402-201ENST00000550337 TMEM106CQ9BVX2 250 aa11.81□□□□□ -0.52
LINC02402-201ENST00000550337 GSE1Q14687 1217 aa11.8□□□□□ -0.52
LINC02402-201ENST00000550337 FAM212AQ96EL1 285 aa11.8□□□□□ -0.52
LINC02402-201ENST00000550337 PCDHB13Q9Y5F0 798 aa11.8□□□□□ -0.52
LINC02402-201ENST00000550337 ECM2O94769 699 aaPredicted RBP11.79□□□□□ -0.52
LINC02402-201ENST00000550337 SGIP1Q9BQI5 828 aa11.78□□□□□ -0.52
LINC02402-201ENST00000550337 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
LINC02402-201ENST00000550337 TRIM41Q8WV44 630 aa11.75□□□□□ -0.53
LINC02402-201ENST00000550337 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
LINC02402-201ENST00000550337 C3orf67Q6ZVT6 689 aa11.68□□□□□ -0.54
LINC02402-201ENST00000550337 RGL2O15211 777 aa11.67□□□□□ -0.54
LINC02402-201ENST00000550337 PLA2G2EQ9NZK7 142 aa11.66□□□□□ -0.54
LINC02402-201ENST00000550337 DCAF8L2P0C7V8 631 aa11.65□□□□□ -0.54
LINC02402-201ENST00000550337 ERBB3P21860 1342 aa11.64□□□□□ -0.55
LINC02402-201ENST00000550337 CHRM1P11229 460 aaPredicted RBP11.62□□□□□ -0.55
LINC02402-201ENST00000550337 PYGBP11216 843 aa11.61□□□□□ -0.55
LINC02402-201ENST00000550337 RNF25Q96BH1 459 aaPredicted RBP11.61□□□□□ -0.55
LINC02402-201ENST00000550337 HOXB3P14651 431 aaPredicted RBP11.6□□□□□ -0.55
LINC02402-201ENST00000550337 HOXB1P14653 301 aaPredicted RBP11.6□□□□□ -0.55
LINC02402-201ENST00000550337 PTGER2P43116 358 aa11.6□□□□□ -0.55
LINC02402-201ENST00000550337 PDCD7Q8N8D1 485 aaKnown RBP11.57□□□□□ -0.56
LINC02402-201ENST00000550337 VARS2Q5ST30 1063 aaKnown RBP11.55□□□□□ -0.56
LINC02402-201ENST00000550337 RIOK3O14730 519 aaKnown RBP11.54□□□□□ -0.56
LINC02402-201ENST00000550337 TAOK2Q9UL54 1235 aa11.49□□□□□ -0.57
LINC02402-201ENST00000550337 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
LINC02402-201ENST00000550337 VGFO15240 615 aaPredicted RBP11.47□□□□□ -0.57
LINC02402-201ENST00000550337 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
LINC02402-201ENST00000550337 ZNF687Q8N1G0 1237 aa11.47□□□□□ -0.57
LINC02402-201ENST00000550337 ZNF710Q8N1W2 664 aa11.46□□□□□ -0.57
LINC02402-201ENST00000550337 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
LINC02402-201ENST00000550337 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
LINC02402-201ENST00000550337 PCDHB8Q9UN66 801 aa11.43□□□□□ -0.58
LINC02402-201ENST00000550337 ANKRD13DQ6ZTN6 518 aa11.41□□□□□ -0.58
LINC02402-201ENST00000550337 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.4□□□□□ -0.58
LINC02402-201ENST00000550337 BBXQ8WY36 941 aaPredicted RBP11.4□□□□□ -0.58
LINC02402-201ENST00000550337 ZFP91Q96JP5 570 aaPredicted RBP11.4□□□□□ -0.58
LINC02402-201ENST00000550337 STK25O00506 426 aa11.38□□□□□ -0.59
LINC02402-201ENST00000550337 PDAP1Q13442 181 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms