RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 FAM212AQ96EL1 285 aa12.5□□□□□ -0.41
PFDN5-209ENST00000550069 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-209ENST00000550069 PKD2Q13563 968 aa12.47□□□□□ -0.41
PFDN5-209ENST00000550069 ZNF579Q8NAF0 562 aaKnown RBP12.46□□□□□ -0.41
PFDN5-209ENST00000550069 PYGBP11216 843 aa12.45□□□□□ -0.42
PFDN5-209ENST00000550069 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
PFDN5-209ENST00000550069 RTN4Q9NQC3 1192 aaKnown RBP12.44□□□□□ -0.42
PFDN5-209ENST00000550069 GSE1Q14687 1217 aa12.41□□□□□ -0.42
PFDN5-209ENST00000550069 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
PFDN5-209ENST00000550069 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
PFDN5-209ENST00000550069 MAP3K13O43283 966 aa12.38□□□□□ -0.43
PFDN5-209ENST00000550069 GALR2O43603 387 aaPredicted RBP12.36□□□□□ -0.43
PFDN5-209ENST00000550069 GABBR2O75899 941 aa12.35□□□□□ -0.43
PFDN5-209ENST00000550069 RNF25Q96BH1 459 aaPredicted RBP12.35□□□□□ -0.43
PFDN5-209ENST00000550069 MS4A3Q96HJ5 214 aa12.35□□□□□ -0.43
PFDN5-209ENST00000550069 TRPC6Q9Y210 931 aa12.34□□□□□ -0.43
PFDN5-209ENST00000550069 ECM2O94769 699 aaPredicted RBP12.31□□□□□ -0.44
PFDN5-209ENST00000550069 RGL2O15211 777 aa12.3□□□□□ -0.44
PFDN5-209ENST00000550069 IFNL1Q8IU54 200 aa12.3□□□□□ -0.44
PFDN5-209ENST00000550069 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
PFDN5-209ENST00000550069 PCDHB13Q9Y5F0 798 aa12.3□□□□□ -0.44
PFDN5-209ENST00000550069 CHRM1P11229 460 aaPredicted RBP12.28□□□□□ -0.44
PFDN5-209ENST00000550069 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
PFDN5-209ENST00000550069 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
PFDN5-209ENST00000550069 POTEIP0CG38 1075 aa12.19□□□□□ -0.46
PFDN5-209ENST00000550069 SGIP1Q9BQI5 828 aa12.18□□□□□ -0.46
PFDN5-209ENST00000550069 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
PFDN5-209ENST00000550069 BMP2KQ9NSY1 1161 aaPredicted RBP12.15□□□□□ -0.46
PFDN5-209ENST00000550069 ZNF467Q7Z7K2 595 aaPredicted RBP12.14□□□□□ -0.47
PFDN5-209ENST00000550069 PELP1Q8IZL8 1130 aaKnown RBP12.11□□□□□ -0.47
PFDN5-209ENST00000550069 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-209ENST00000550069 TTLL13PA6NNM8 815 aa12.1□□□□□ -0.47
PFDN5-209ENST00000550069 PSEN1P49768 467 aa12.1□□□□□ -0.47
PFDN5-209ENST00000550069 CLCN6P51797 869 aa12.1□□□□□ -0.47
PFDN5-209ENST00000550069 ZFP91Q96JP5 570 aaPredicted RBP12.1□□□□□ -0.47
PFDN5-209ENST00000550069 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
PFDN5-209ENST00000550069 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-209ENST00000550069 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-209ENST00000550069 PDAP1Q13442 181 aaKnown RBP12.07□□□□□ -0.48
PFDN5-209ENST00000550069 TIE1P35590 1138 aa12.06□□□□□ -0.48
PFDN5-209ENST00000550069 VGFO15240 615 aaPredicted RBP12.05□□□□□ -0.48
PFDN5-209ENST00000550069 ASTLQ6HA08 431 aaPredicted RBP12.05□□□□□ -0.48
PFDN5-209ENST00000550069 DCBLD2Q96PD2 775 aa12.05□□□□□ -0.48
PFDN5-209ENST00000550069 DCAF8L2P0C7V8 631 aa12.04□□□□□ -0.48
PFDN5-209ENST00000550069 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
PFDN5-209ENST00000550069 BCL11BQ9C0K0 894 aaPredicted RBP12□□□□□ -0.49
PFDN5-209ENST00000550069 STK25O00506 426 aa11.98□□□□□ -0.49
PFDN5-209ENST00000550069 CABP2Q9NPB3 220 aa11.98□□□□□ -0.49
PFDN5-209ENST00000550069 CHGAP10645 457 aaKnown RBP11.97□□□□□ -0.49
PFDN5-209ENST00000550069 STK24Q9Y6E0 443 aa11.96□□□□□ -0.49
PFDN5-209ENST00000550069 POTEFA5A3E0 1075 aa11.93□□□□□ -0.5
PFDN5-209ENST00000550069 HS6ST3Q8IZP7 471 aa11.93□□□□□ -0.5
PFDN5-209ENST00000550069 EFCAB3Q8N7B9 438 aa11.93□□□□□ -0.5
PFDN5-209ENST00000550069 NKX1-1Q15270 411 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-209ENST00000550069 COLQQ9Y215 455 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-209ENST00000550069 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
PFDN5-209ENST00000550069 TAOK2Q9UL54 1235 aa11.86□□□□□ -0.51
PFDN5-209ENST00000550069 IRX5P78411 483 aaPredicted RBP11.84□□□□□ -0.51
PFDN5-209ENST00000550069 PHF8Q9UPP1 1060 aa11.84□□□□□ -0.51
PFDN5-209ENST00000550069 POTEB2H3BUK9 544 aa11.83□□□□□ -0.52
PFDN5-209ENST00000550069 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
PFDN5-209ENST00000550069 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
PFDN5-209ENST00000550069 GOLGA2Q08379 1002 aa11.82□□□□□ -0.52
PFDN5-209ENST00000550069 MKRN3Q13064 507 aaKnown RBP11.82□□□□□ -0.52
PFDN5-209ENST00000550069 DPY19L2Q6NUT2 758 aa11.81□□□□□ -0.52
PFDN5-209ENST00000550069 PDCD7Q8N8D1 485 aaKnown RBP11.81□□□□□ -0.52
PFDN5-209ENST00000550069 MS4A4AQ96JQ5 239 aa11.81□□□□□ -0.52
PFDN5-209ENST00000550069 C7P10643 843 aa11.8□□□□□ -0.52
PFDN5-209ENST00000550069 IER5LQ5T953 404 aa11.8□□□□□ -0.52
PFDN5-209ENST00000550069 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
PFDN5-209ENST00000550069 FBXO22Q8NEZ5 403 aa11.79□□□□□ -0.52
PFDN5-209ENST00000550069 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.79□□□□□ -0.52
PFDN5-209ENST00000550069 POTEJP0CG39 1038 aa11.78□□□□□ -0.52
PFDN5-209ENST00000550069 DNAJC5Q9H3Z4 198 aa11.78□□□□□ -0.52
PFDN5-209ENST00000550069 SOX12O15370 315 aa11.74□□□□□ -0.53
PFDN5-209ENST00000550069 SEC24BO95487 1268 aa11.74□□□□□ -0.53
PFDN5-209ENST00000550069 PLCG2P16885 1265 aa11.74□□□□□ -0.53
PFDN5-209ENST00000550069 OCEL1Q9H607 264 aa11.73□□□□□ -0.53
PFDN5-209ENST00000550069 PPP1R37O75864 691 aa11.72□□□□□ -0.53
PFDN5-209ENST00000550069 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-209ENST00000550069 BBXQ8WY36 941 aaPredicted RBP11.71□□□□□ -0.53
PFDN5-209ENST00000550069 NLRP6P59044 892 aa11.68□□□□□ -0.54
PFDN5-209ENST00000550069 LHX8Q68G74 356 aa11.62□□□□□ -0.55
PFDN5-209ENST00000550069 PAXIP1Q6ZW49 1069 aaPredicted RBP11.61□□□□□ -0.55
PFDN5-209ENST00000550069 CFAP44Q96MT7 982 aa11.6□□□□□ -0.55
PFDN5-209ENST00000550069 MICALL2Q8IY33 904 aa11.59□□□□□ -0.55
PFDN5-209ENST00000550069 BOLA1Q9Y3E2 137 aa11.58□□□□□ -0.56
PFDN5-209ENST00000550069 OTUD5Q96G74 571 aa11.57□□□□□ -0.56
PFDN5-209ENST00000550069 TMEM121BQ9BXQ6 578 aaPredicted RBP11.56□□□□□ -0.56
PFDN5-209ENST00000550069 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
PFDN5-209ENST00000550069 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
PFDN5-209ENST00000550069 TMEM92Q6UXU6 159 aa11.53□□□□□ -0.56
PFDN5-209ENST00000550069 CADPS2Q86UW7 1296 aa11.52□□□□□ -0.57
PFDN5-209ENST00000550069 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
PFDN5-209ENST00000550069 PLCB2Q00722 1185 aa11.49□□□□□ -0.57
PFDN5-209ENST00000550069 CCDC180Q9P1Z9 1646 aa11.48□□□□□ -0.57
PFDN5-209ENST00000550069 TSHZ2Q9NRE2 1034 aa11.46□□□□□ -0.57
PFDN5-209ENST00000550069 RYDENQ9NUL5 291 aaKnown RBP11.46□□□□□ -0.57
PFDN5-209ENST00000550069 C3orf67Q6ZVT6 689 aa11.45□□□□□ -0.58
PFDN5-209ENST00000550069 G3V3G9 751 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms