RNA–Protein interactions for RNA: ENST00000549525.1

COX6A1-202, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

Gene COX6A1, Length 767 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-202ENST00000549525 CCDC61Q9Y6R9 512 aa13.06□□□□□ -0.32
COX6A1-202ENST00000549525 DCAF8Q5TAQ9 597 aa13.05□□□□□ -0.32
COX6A1-202ENST00000549525 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
COX6A1-202ENST00000549525 GSE1Q14687 1217 aa13.01□□□□□ -0.33
COX6A1-202ENST00000549525 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
COX6A1-202ENST00000549525 CIZ1Q9ULV3 898 aaPredicted RBP13.01□□□□□ -0.33
COX6A1-202ENST00000549525 PKD2Q13563 968 aa12.96□□□□□ -0.33
COX6A1-202ENST00000549525 SP7Q8TDD2 431 aaPredicted RBP12.95□□□□□ -0.34
COX6A1-202ENST00000549525 PYGBP11216 843 aa12.93□□□□□ -0.34
COX6A1-202ENST00000549525 KIF12Q96FN5 646 aa12.93□□□□□ -0.34
COX6A1-202ENST00000549525 MAP3K13O43283 966 aa12.88□□□□□ -0.35
COX6A1-202ENST00000549525 CHRM1P11229 460 aaPredicted RBP12.88□□□□□ -0.35
COX6A1-202ENST00000549525 RTN4Q9NQC3 1192 aaKnown RBP12.88□□□□□ -0.35
COX6A1-202ENST00000549525 GABBR2O75899 941 aa12.87□□□□□ -0.35
COX6A1-202ENST00000549525 TRIM41Q8WV44 630 aa12.85□□□□□ -0.35
COX6A1-202ENST00000549525 GALR2O43603 387 aaPredicted RBP12.84□□□□□ -0.35
COX6A1-202ENST00000549525 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
COX6A1-202ENST00000549525 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
COX6A1-202ENST00000549525 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
COX6A1-202ENST00000549525 PCDHB13Q9Y5F0 798 aa12.82□□□□□ -0.36
COX6A1-202ENST00000549525 CLCN6P51797 869 aa12.8□□□□□ -0.36
COX6A1-202ENST00000549525 IFNL1Q8IU54 200 aa12.8□□□□□ -0.36
COX6A1-202ENST00000549525 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
COX6A1-202ENST00000549525 SGIP1Q9BQI5 828 aa12.79□□□□□ -0.36
COX6A1-202ENST00000549525 PCDHB8Q9UN66 801 aa12.78□□□□□ -0.36
COX6A1-202ENST00000549525 TRPC6Q9Y210 931 aa12.77□□□□□ -0.37
COX6A1-202ENST00000549525 RGL2O15211 777 aa12.76□□□□□ -0.37
COX6A1-202ENST00000549525 ABCC9O60706 1549 aa12.76□□□□□ -0.37
COX6A1-202ENST00000549525 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
COX6A1-202ENST00000549525 RIOK3O14730 519 aaKnown RBP12.7□□□□□ -0.38
COX6A1-202ENST00000549525 POTEIP0CG38 1075 aa12.66□□□□□ -0.38
COX6A1-202ENST00000549525 BMP2KQ9NSY1 1161 aaPredicted RBP12.65□□□□□ -0.38
COX6A1-202ENST00000549525 TIE1P35590 1138 aa12.62□□□□□ -0.39
COX6A1-202ENST00000549525 PSEN1P49768 467 aa12.62□□□□□ -0.39
COX6A1-202ENST00000549525 PDAP1Q13442 181 aaKnown RBP12.62□□□□□ -0.39
COX6A1-202ENST00000549525 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
COX6A1-202ENST00000549525 ASTLQ6HA08 431 aaPredicted RBP12.61□□□□□ -0.39
COX6A1-202ENST00000549525 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
COX6A1-202ENST00000549525 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
COX6A1-202ENST00000549525 DCBLD2Q96PD2 775 aa12.6□□□□□ -0.39
COX6A1-202ENST00000549525 TMEM106CQ9BVX2 250 aa12.6□□□□□ -0.39
COX6A1-202ENST00000549525 DCAF8L2P0C7V8 631 aa12.59□□□□□ -0.39
COX6A1-202ENST00000549525 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.58□□□□□ -0.4
COX6A1-202ENST00000549525 ZFP91Q96JP5 570 aaPredicted RBP12.58□□□□□ -0.4
COX6A1-202ENST00000549525 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
COX6A1-202ENST00000549525 PELP1Q8IZL8 1130 aaKnown RBP12.56□□□□□ -0.4
COX6A1-202ENST00000549525 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
COX6A1-202ENST00000549525 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
COX6A1-202ENST00000549525 TRIM35Q9UPQ4 493 aa12.51□□□□□ -0.41
COX6A1-202ENST00000549525 MYO15BQ96JP2 1530 aa12.51□□□□□ -0.41
COX6A1-202ENST00000549525 DCAF1Q9Y4B6 1507 aa12.51□□□□□ -0.41
COX6A1-202ENST00000549525 NACADO15069 1562 aa12.49□□□□□ -0.41
COX6A1-202ENST00000549525 BCL11BQ9C0K0 894 aaPredicted RBP12.49□□□□□ -0.41
COX6A1-202ENST00000549525 STK25O00506 426 aa12.48□□□□□ -0.41
COX6A1-202ENST00000549525 HS6ST3Q8IZP7 471 aa12.46□□□□□ -0.41
COX6A1-202ENST00000549525 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
COX6A1-202ENST00000549525 STK24Q9Y6E0 443 aa12.46□□□□□ -0.41
COX6A1-202ENST00000549525 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
COX6A1-202ENST00000549525 RB1CC1Q8TDY2 1594 aa12.44□□□□□ -0.42
COX6A1-202ENST00000549525 EFCAB3Q8N7B9 438 aa12.41□□□□□ -0.42
COX6A1-202ENST00000549525 SLC39A7Q92504 469 aa12.39□□□□□ -0.43
COX6A1-202ENST00000549525 GOLGA2Q08379 1002 aa12.38□□□□□ -0.43
COX6A1-202ENST00000549525 IER5LQ5T953 404 aa12.38□□□□□ -0.43
COX6A1-202ENST00000549525 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
COX6A1-202ENST00000549525 POTEFA5A3E0 1075 aa12.37□□□□□ -0.43
COX6A1-202ENST00000549525 C7P10643 843 aa12.37□□□□□ -0.43
COX6A1-202ENST00000549525 IRX5P78411 483 aaPredicted RBP12.36□□□□□ -0.43
COX6A1-202ENST00000549525 MKRN3Q13064 507 aaKnown RBP12.36□□□□□ -0.43
COX6A1-202ENST00000549525 COLQQ9Y215 455 aaPredicted RBP12.36□□□□□ -0.43
COX6A1-202ENST00000549525 DNAJC5Q9H3Z4 198 aa12.35□□□□□ -0.43
COX6A1-202ENST00000549525 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
COX6A1-202ENST00000549525 ILDR1Q86SU0 546 aaPredicted RBP12.33□□□□□ -0.44
COX6A1-202ENST00000549525 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
COX6A1-202ENST00000549525 SOX12O15370 315 aa12.3□□□□□ -0.44
COX6A1-202ENST00000549525 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
COX6A1-202ENST00000549525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.3□□□□□ -0.44
COX6A1-202ENST00000549525 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
COX6A1-202ENST00000549525 FBXO22Q8NEZ5 403 aa12.28□□□□□ -0.44
COX6A1-202ENST00000549525 OCEL1Q9H607 264 aa12.28□□□□□ -0.44
COX6A1-202ENST00000549525 SEC24BO95487 1268 aa12.27□□□□□ -0.45
COX6A1-202ENST00000549525 MS4A4AQ96JQ5 239 aa12.27□□□□□ -0.45
COX6A1-202ENST00000549525 POTEB2H3BUK9 544 aa12.26□□□□□ -0.45
COX6A1-202ENST00000549525 PLCG2P16885 1265 aa12.26□□□□□ -0.45
COX6A1-202ENST00000549525 DPY19L2Q6NUT2 758 aa12.24□□□□□ -0.45
COX6A1-202ENST00000549525 BBXQ8WY36 941 aaPredicted RBP12.24□□□□□ -0.45
COX6A1-202ENST00000549525 POTEJP0CG39 1038 aa12.22□□□□□ -0.45
COX6A1-202ENST00000549525 NLRP6P59044 892 aa12.22□□□□□ -0.45
COX6A1-202ENST00000549525 GTPBP6O43824 516 aaPredicted RBP12.18□□□□□ -0.46
COX6A1-202ENST00000549525 PPP1R37O75864 691 aa12.15□□□□□ -0.46
COX6A1-202ENST00000549525 LHX8Q68G74 356 aa12.14□□□□□ -0.47
COX6A1-202ENST00000549525 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
COX6A1-202ENST00000549525 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
COX6A1-202ENST00000549525 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
COX6A1-202ENST00000549525 L3MBTL3Q96JM7 780 aaPredicted RBP12.08□□□□□ -0.48
COX6A1-202ENST00000549525 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
COX6A1-202ENST00000549525 SCRIBQ14160 1630 aa12.08□□□□□ -0.48
COX6A1-202ENST00000549525 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
COX6A1-202ENST00000549525 MICALL2Q8IY33 904 aa12.07□□□□□ -0.48
COX6A1-202ENST00000549525 SPRYD3Q8NCJ5 442 aa12.06□□□□□ -0.48
COX6A1-202ENST00000549525 OTUD5Q96G74 571 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms