RNA–Protein interactions for RNA: ENST00000545377.5

ARHGEF28-214, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ARHGEF28, Length 6,351 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-214ENST00000545377 PPM1GO15355 546 aaPredicted RBP23.12■■□□□ 1.29
ARHGEF28-214ENST00000545377 EIF5BO60841 1220 aaKnown RBP23.1■■□□□ 1.29
ARHGEF28-214ENST00000545377 SCRIBQ14160 1630 aa23.09■■□□□ 1.29
ARHGEF28-214ENST00000545377 CCDC136Q96JN2 1154 aa23.04■■□□□ 1.28
ARHGEF28-214ENST00000545377 RGL3Q3MIN7 710 aa23.04■■□□□ 1.28
ARHGEF28-214ENST00000545377 TAOK2Q9UL54 1235 aa23.04■■□□□ 1.28
ARHGEF28-214ENST00000545377 MTUS2Q5JR59 1369 aa23.03■■□□□ 1.28
ARHGEF28-214ENST00000545377 MRS2Q9HD23 443 aa22.99■■□□□ 1.27
ARHGEF28-214ENST00000545377 RRP7BPQ9NSQ0 103 aa22.99■■□□□ 1.27
ARHGEF28-214ENST00000545377 TPRNQ4KMQ1 711 aa22.97■■□□□ 1.27
ARHGEF28-214ENST00000545377 HIRIP3Q9BW71 556 aaPredicted RBP22.97■■□□□ 1.27
ARHGEF28-214ENST00000545377 PLEKHD1A6NEE1 506 aa22.94■■□□□ 1.26
ARHGEF28-214ENST00000545377 LAS1LQ9Y4W2 734 aaKnown RBP22.94■■□□□ 1.26
ARHGEF28-214ENST00000545377 SENP3-EIF4A1A0A087X0R7 540 aa22.9■■□□□ 1.26
ARHGEF28-214ENST00000545377 NCBP3Q53F19 620 aaKnown RBP22.9■■□□□ 1.26
ARHGEF28-214ENST00000545377 NBR1Q14596 966 aa22.9■■□□□ 1.26
ARHGEF28-214ENST00000545377 IRX6P78412 446 aaPredicted RBP22.88■■□□□ 1.25
ARHGEF28-214ENST00000545377 MLECQ14165 292 aa22.87■■□□□ 1.25
ARHGEF28-214ENST00000545377 NCLP19338 710 aaKnown RBP22.86■■□□□ 1.25
ARHGEF28-214ENST00000545377 POGKQ9P215 609 aa22.86■■□□□ 1.25
ARHGEF28-214ENST00000545377 CFAP53Q96M91 514 aa22.85■■□□□ 1.25
ARHGEF28-214ENST00000545377 ZRSR1Q15695 479 aaKnown RBP22.81■■□□□ 1.24
ARHGEF28-214ENST00000545377 ACIN1Q9UKV3 1341 aaKnown RBP22.8■■□□□ 1.24
ARHGEF28-214ENST00000545377 NEUROD2Q15784 382 aa22.8■■□□□ 1.24
ARHGEF28-214ENST00000545377 GOLGA2Q08379 1002 aa22.8■■□□□ 1.24
ARHGEF28-214ENST00000545377 SOX12O15370 315 aa22.78■■□□□ 1.24
ARHGEF28-214ENST00000545377 TNNT2P45379 298 aaPredicted RBP22.76■■□□□ 1.23
ARHGEF28-214ENST00000545377 EIF4G2P78344 907 aaKnown RBP eCLIP22.73■■□□□ 1.23
ARHGEF28-214ENST00000545377 OS9Q13438 667 aaPredicted RBP22.73■■□□□ 1.23
ARHGEF28-214ENST00000545377 KNSTRNQ9Y448 316 aa22.73■■□□□ 1.23
ARHGEF28-214ENST00000545377 CLSTN1O94985 981 aa22.72■■□□□ 1.23
ARHGEF28-214ENST00000545377 FTSJ3Q8IY81 847 aaKnown RBP22.72■■□□□ 1.23
ARHGEF28-214ENST00000545377 MAPK8IP3Q9UPT6 1336 aa22.72■■□□□ 1.23
ARHGEF28-214ENST00000545377 CASC1Q6TDU7 716 aa22.72■■□□□ 1.23
ARHGEF28-214ENST00000545377 ISY1Q9ULR0 285 aaKnown RBP22.71■■□□□ 1.23
ARHGEF28-214ENST00000545377 ERCC6Q03468 1493 aa22.71■■□□□ 1.23
ARHGEF28-214ENST00000545377 NAP1L2Q9ULW6 460 aaPredicted RBP22.7■■□□□ 1.22
ARHGEF28-214ENST00000545377 CFDP1Q9UEE9 299 aaPredicted RBP22.7■■□□□ 1.22
ARHGEF28-214ENST00000545377 FGD1P98174 961 aa22.64■■□□□ 1.21
ARHGEF28-214ENST00000545377 CDCA8Q53HL2 280 aa22.64■■□□□ 1.21
ARHGEF28-214ENST00000545377 U2SURPO15042 1029 aaKnown RBP22.62■■□□□ 1.21
ARHGEF28-214ENST00000545377 BECN1Q14457 450 aa22.62■■□□□ 1.21
ARHGEF28-214ENST00000545377 NUDCQ9Y266 331 aa22.62■■□□□ 1.21
ARHGEF28-214ENST00000545377 GOLGA6L22H0YM25 854 aa22.61■■□□□ 1.21
ARHGEF28-214ENST00000545377 CARD11Q9BXL7 1154 aa22.6■■□□□ 1.21
ARHGEF28-214ENST00000545377 CCDC9Q9Y3X0 531 aaKnown RBP22.58■■□□□ 1.2
ARHGEF28-214ENST00000545377 PTMAP06454 111 aaKnown RBP22.57■■□□□ 1.2
ARHGEF28-214ENST00000545377 KCNJ4P48050 445 aa22.56■■□□□ 1.2
ARHGEF28-214ENST00000545377 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
ARHGEF28-214ENST00000545377 RSF1Q96T23 1441 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF28-214ENST00000545377 FRAT1Q92837 279 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF28-214ENST00000545377 TRIM44Q96DX7 344 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF28-214ENST00000545377 ZNF330Q9Y3S2 320 aaPredicted RBP22.53■■□□□ 1.2
ARHGEF28-214ENST00000545377 CC2D1BQ5T0F9 858 aaKnown RBP22.51■■□□□ 1.19
ARHGEF28-214ENST00000545377 PAK3O75914 559 aaPredicted RBP22.5■■□□□ 1.19
ARHGEF28-214ENST00000545377 PLCB2Q00722 1185 aa22.5■■□□□ 1.19
ARHGEF28-214ENST00000545377 HDGFP51858 240 aaKnown RBP22.5■■□□□ 1.19
ARHGEF28-214ENST00000545377 GLIPR1L2Q4G1C9 344 aa22.5■■□□□ 1.19
ARHGEF28-214ENST00000545377 ZCCHC6Q5VYS8 1495 aaKnown RBP22.49■■□□□ 1.19
ARHGEF28-214ENST00000545377 SRPK2P78362 688 aaKnown RBP22.49■■□□□ 1.19
ARHGEF28-214ENST00000545377 CSB-PGBD3P0DP91 1061 aa22.48■■□□□ 1.19
ARHGEF28-214ENST00000545377 CLIP1P30622 1438 aa22.46■■□□□ 1.19
ARHGEF28-214ENST00000545377 DDRGK1Q96HY6 314 aa22.45■■□□□ 1.19
ARHGEF28-214ENST00000545377 DNTTIP2Q5QJE6 756 aaKnown RBP22.45■■□□□ 1.18
ARHGEF28-214ENST00000545377 STK26Q9P289 416 aa22.43■■□□□ 1.18
ARHGEF28-214ENST00000545377 TMX4Q9H1E5 349 aaPredicted RBP22.42■■□□□ 1.18
ARHGEF28-214ENST00000545377 GGT6Q6P531 493 aa22.41■■□□□ 1.18
ARHGEF28-214ENST00000545377 RGS3P49796 1198 aa22.38■■□□□ 1.17
ARHGEF28-214ENST00000545377 KANK1Q14678 1352 aa22.38■■□□□ 1.17
ARHGEF28-214ENST00000545377 RTF1Q92541 710 aaKnown RBP22.37■■□□□ 1.17
ARHGEF28-214ENST00000545377 PNNQ9H307 717 aaKnown RBP22.36■■□□□ 1.17
ARHGEF28-214ENST00000545377 MIER1Q8N108 512 aa22.34■■□□□ 1.17
ARHGEF28-214ENST00000545377 HSP90AB1P08238 724 aaKnown RBP22.31■■□□□ 1.16
ARHGEF28-214ENST00000545377 G3V3G9 751 aa22.3■■□□□ 1.16
ARHGEF28-214ENST00000545377 DCAF8Q5TAQ9 597 aa22.3■■□□□ 1.16
ARHGEF28-214ENST00000545377 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.29■■□□□ 1.16
ARHGEF28-214ENST00000545377 GOLGA6L6A8MZA4 724 aa22.29■■□□□ 1.16
ARHGEF28-214ENST00000545377 ANP32EQ9BTT0 268 aa22.29■■□□□ 1.16
ARHGEF28-214ENST00000545377 AMER1Q5JTC6 1135 aaPredicted RBP22.29■■□□□ 1.16
ARHGEF28-214ENST00000545377 DCAF11Q8TEB1 546 aa22.29■■□□□ 1.16
ARHGEF28-214ENST00000545377 CHMP4BQ9H444 224 aaKnown RBP22.28■■□□□ 1.16
ARHGEF28-214ENST00000545377 EIF4G1Q04637 1599 aaKnown RBP22.28■■□□□ 1.16
ARHGEF28-214ENST00000545377 GOLGA6L4A6NEF3 574 aa22.27■■□□□ 1.16
ARHGEF28-214ENST00000545377 GNL2Q13823 731 aaKnown RBP22.27■■□□□ 1.16
ARHGEF28-214ENST00000545377 APBB1O00213 710 aa22.27■■□□□ 1.16
ARHGEF28-214ENST00000545377 PRM3Q9NNZ6 103 aa22.27■■□□□ 1.15
ARHGEF28-214ENST00000545377 MORC1Q86VD1 984 aa22.26■■□□□ 1.15
ARHGEF28-214ENST00000545377 CCNB3Q8WWL7 1395 aa22.24■■□□□ 1.15
ARHGEF28-214ENST00000545377 TMF1P82094 1093 aa22.24■■□□□ 1.15
ARHGEF28-214ENST00000545377 CHMP3Q9Y3E7 222 aa22.21■■□□□ 1.15
ARHGEF28-214ENST00000545377 AEBP2Q6ZN18 517 aaPredicted RBP22.2■■□□□ 1.15
ARHGEF28-214ENST00000545377 SUPT16HQ9Y5B9 1047 aaKnown RBP22.2■■□□□ 1.15
ARHGEF28-214ENST00000545377 MS4A1P11836 297 aa22.2■■□□□ 1.14
ARHGEF28-214ENST00000545377 HDGFL2Q7Z4V5 671 aaPredicted RBP22.2■■□□□ 1.14
ARHGEF28-214ENST00000545377 BAZ1BQ9UIG0 1483 aaKnown RBP22.18■■□□□ 1.14
ARHGEF28-214ENST00000545377 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
ARHGEF28-214ENST00000545377 RB1CC1Q8TDY2 1594 aa22.15■■□□□ 1.14
ARHGEF28-214ENST00000545377 TAF7LQ5H9L4 462 aa22.15■■□□□ 1.14
ARHGEF28-214ENST00000545377 MCCP23508 829 aa22.15■■□□□ 1.14
ARHGEF28-214ENST00000545377 NRDCO43847 1150 aa22.14■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms