RNA–Protein interactions for RNA: ENST00000544862.5

TNFSF11-205, Transcript of TNF superfamily member 11, humanhuman

TSL 1 (best) BASIC

Gene TNFSF11, Length 818 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11-205ENST00000544862 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
TNFSF11-205ENST00000544862 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
TNFSF11-205ENST00000544862 PRR29P0C7W0 189 aa13.45□□□□□ -0.26
TNFSF11-205ENST00000544862 LAMC3Q9Y6N6 1575 aa13.45□□□□□ -0.26
TNFSF11-205ENST00000544862 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
TNFSF11-205ENST00000544862 WDR62O43379 1518 aa13.44□□□□□ -0.26
TNFSF11-205ENST00000544862 SOCS7O14512 581 aa13.43□□□□□ -0.26
TNFSF11-205ENST00000544862 MRC2Q9UBG0 1479 aa13.38□□□□□ -0.27
TNFSF11-205ENST00000544862 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
TNFSF11-205ENST00000544862 FBXO3Q9UK99 471 aa13.35□□□□□ -0.27
TNFSF11-205ENST00000544862 PDS5BQ9NTI5 1447 aa13.35□□□□□ -0.27
TNFSF11-205ENST00000544862 ILDR2Q71H61 639 aa13.34□□□□□ -0.27
TNFSF11-205ENST00000544862 FBXO41Q8TF61 875 aa13.33□□□□□ -0.28
TNFSF11-205ENST00000544862 KDM4FA0A1W2PPD8 638 aa13.3□□□□□ -0.28
TNFSF11-205ENST00000544862 HMGXB3Q12766 1538 aa13.29□□□□□ -0.28
TNFSF11-205ENST00000544862 ERCC6L2Q5T890 1561 aa13.28□□□□□ -0.28
TNFSF11-205ENST00000544862 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
TNFSF11-205ENST00000544862 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
TNFSF11-205ENST00000544862 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
TNFSF11-205ENST00000544862 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
TNFSF11-205ENST00000544862 PLEKHG5O94827 1062 aa13.19□□□□□ -0.3
TNFSF11-205ENST00000544862 HECW2Q9P2P5 1572 aa13.19□□□□□ -0.3
TNFSF11-205ENST00000544862 CHADLQ6NUI6 762 aa13.17□□□□□ -0.3
TNFSF11-205ENST00000544862 MIER1Q8N108 512 aa13.14□□□□□ -0.31
TNFSF11-205ENST00000544862 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
TNFSF11-205ENST00000544862 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TNFSF11-205ENST00000544862 CHD1O14646 1710 aa13.11□□□□□ -0.31
TNFSF11-205ENST00000544862 PLCD3Q8N3E9 789 aa13.1□□□□□ -0.31
TNFSF11-205ENST00000544862 ZCCHC6Q5VYS8 1495 aaKnown RBP13.1□□□□□ -0.31
TNFSF11-205ENST00000544862 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
TNFSF11-205ENST00000544862 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
TNFSF11-205ENST00000544862 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
TNFSF11-205ENST00000544862 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
TNFSF11-205ENST00000544862 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
TNFSF11-205ENST00000544862 MNX1P50219 401 aaPredicted RBP13.06□□□□□ -0.32
TNFSF11-205ENST00000544862 BAZ1BQ9UIG0 1483 aaKnown RBP13.05□□□□□ -0.32
TNFSF11-205ENST00000544862 CEP164Q9UPV0 1460 aa13.03□□□□□ -0.32
TNFSF11-205ENST00000544862 ZNF608Q9ULD9 1512 aaPredicted RBP13.01□□□□□ -0.33
TNFSF11-205ENST00000544862 KIF13AQ9H1H9 1805 aa13.01□□□□□ -0.33
TNFSF11-205ENST00000544862 CADPSQ9ULU8 1353 aa13□□□□□ -0.33
TNFSF11-205ENST00000544862 HAX1O00165 279 aa12.99□□□□□ -0.33
TNFSF11-205ENST00000544862 C19orf67A6NJJ6 358 aa12.98□□□□□ -0.33
TNFSF11-205ENST00000544862 SYNJ2O15056 1496 aa12.95□□□□□ -0.34
TNFSF11-205ENST00000544862 URB2Q14146 1524 aaKnown RBP12.93□□□□□ -0.34
TNFSF11-205ENST00000544862 CD44P16070 742 aaKnown RBP12.9□□□□□ -0.34
TNFSF11-205ENST00000544862 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
TNFSF11-205ENST00000544862 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
TNFSF11-205ENST00000544862 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
TNFSF11-205ENST00000544862 KLHL34Q8N239 644 aa12.88□□□□□ -0.35
TNFSF11-205ENST00000544862 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
TNFSF11-205ENST00000544862 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
TNFSF11-205ENST00000544862 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
TNFSF11-205ENST00000544862 ADGRL1O94910 1474 aa12.86□□□□□ -0.35
TNFSF11-205ENST00000544862 CLASP1Q7Z460 1538 aa12.86□□□□□ -0.35
TNFSF11-205ENST00000544862 CLCN6P51797 869 aa12.82□□□□□ -0.36
TNFSF11-205ENST00000544862 NUBP1P53384 320 aa12.82□□□□□ -0.36
TNFSF11-205ENST00000544862 KDM6BO15054 1643 aa12.81□□□□□ -0.36
TNFSF11-205ENST00000544862 IFT140Q96RY7 1462 aa12.81□□□□□ -0.36
TNFSF11-205ENST00000544862 PEG3Q9GZU2 1588 aa12.81□□□□□ -0.36
TNFSF11-205ENST00000544862 EVX2Q03828 476 aa12.8□□□□□ -0.36
TNFSF11-205ENST00000544862 GAPVD1Q14C86 1478 aa12.79□□□□□ -0.36
TNFSF11-205ENST00000544862 SPOCK2Q92563 424 aa12.79□□□□□ -0.36
TNFSF11-205ENST00000544862 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
TNFSF11-205ENST00000544862 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
TNFSF11-205ENST00000544862 ZNF579Q8NAF0 562 aaKnown RBP12.77□□□□□ -0.37
TNFSF11-205ENST00000544862 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
TNFSF11-205ENST00000544862 TSPYL2Q9H2G4 693 aaPredicted RBP12.73□□□□□ -0.37
TNFSF11-205ENST00000544862 GSE1Q14687 1217 aa12.71□□□□□ -0.37
TNFSF11-205ENST00000544862 CCDC61Q9Y6R9 512 aa12.7□□□□□ -0.38
TNFSF11-205ENST00000544862 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
TNFSF11-205ENST00000544862 DCAF8Q5TAQ9 597 aa12.67□□□□□ -0.38
TNFSF11-205ENST00000544862 SYNJ1O43426 1573 aa12.66□□□□□ -0.38
TNFSF11-205ENST00000544862 TSPOAP1O95153 1857 aa12.63□□□□□ -0.39
TNFSF11-205ENST00000544862 GABBR2O75899 941 aa12.62□□□□□ -0.39
TNFSF11-205ENST00000544862 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
TNFSF11-205ENST00000544862 SGIP1Q9BQI5 828 aa12.6□□□□□ -0.39
TNFSF11-205ENST00000544862 FAM69CQ0P6D2 419 aa12.59□□□□□ -0.39
TNFSF11-205ENST00000544862 CFTRP13569 1480 aa12.59□□□□□ -0.39
TNFSF11-205ENST00000544862 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
TNFSF11-205ENST00000544862 KIF12Q96FN5 646 aa12.58□□□□□ -0.4
TNFSF11-205ENST00000544862 DIP2BQ9P265 1576 aa12.57□□□□□ -0.4
TNFSF11-205ENST00000544862 TARBP1Q13395 1621 aaKnown RBP12.56□□□□□ -0.4
TNFSF11-205ENST00000544862 CHRM1P11229 460 aaPredicted RBP12.56□□□□□ -0.4
TNFSF11-205ENST00000544862 CIZ1Q9ULV3 898 aaPredicted RBP12.56□□□□□ -0.4
TNFSF11-205ENST00000544862 TOPBP1Q92547 1522 aa12.52□□□□□ -0.41
TNFSF11-205ENST00000544862 CERKQ8TCT0 537 aa12.51□□□□□ -0.41
TNFSF11-205ENST00000544862 MROH2BQ7Z745 1585 aa12.51□□□□□ -0.41
TNFSF11-205ENST00000544862 MAP3K13O43283 966 aa12.5□□□□□ -0.41
TNFSF11-205ENST00000544862 RTN4Q9NQC3 1192 aaKnown RBP12.5□□□□□ -0.41
TNFSF11-205ENST00000544862 SNAPC4Q5SXM2 1469 aa12.5□□□□□ -0.41
TNFSF11-205ENST00000544862 GALR2O43603 387 aaPredicted RBP12.49□□□□□ -0.41
TNFSF11-205ENST00000544862 PYGBP11216 843 aa12.49□□□□□ -0.41
TNFSF11-205ENST00000544862 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
TNFSF11-205ENST00000544862 MS4A3Q96HJ5 214 aa12.48□□□□□ -0.41
TNFSF11-205ENST00000544862 PCDHB13Q9Y5F0 798 aa12.48□□□□□ -0.41
TNFSF11-205ENST00000544862 PRDM2Q13029 1718 aa12.46□□□□□ -0.41
TNFSF11-205ENST00000544862 CHMP7Q8WUX9 453 aaPredicted RBP12.46□□□□□ -0.41
TNFSF11-205ENST00000544862 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
TNFSF11-205ENST00000544862 TOP2BQ02880 1626 aa12.44□□□□□ -0.42
TNFSF11-205ENST00000544862 DCBLD2Q96PD2 775 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms