RNA–Protein interactions for RNA: ENST00000544361.1

QKI-213, Transcript of QKI, KH domain containing RNA binding, human

TSL 5

Gene QKI, Length 613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
QKI-213	ENST00000544361	FAM212A	Q96EL1	285 aa		12.49	□□□□□ -0.41
QKI-213	ENST00000544361	CLCN6	P51797	869 aa		12.46	□□□□□ -0.41
QKI-213	ENST00000544361	CCDC61	Q9Y6R9	512 aa		12.46	□□□□□ -0.41
QKI-213	ENST00000544361	SPOCK2	Q92563	424 aa		12.43	□□□□□ -0.42
QKI-213	ENST00000544361	DCAF8	Q5TAQ9	597 aa		12.4	□□□□□ -0.42
QKI-213	ENST00000544361	GALR2	O43603	387 aa	Predicted RBP	12.38	□□□□□ -0.43
QKI-213	ENST00000544361	KIF12	Q96FN5	646 aa		12.35	□□□□□ -0.43
QKI-213	ENST00000544361	GSE1	Q14687	1217 aa		12.34	□□□□□ -0.43
QKI-213	ENST00000544361	MS4A3	Q96HJ5	214 aa		12.34	□□□□□ -0.43
QKI-213	ENST00000544361	MAP3K13	O43283	966 aa		12.31	□□□□□ -0.44
QKI-213	ENST00000544361	DCBLD2	Q96PD2	775 aa		12.3	□□□□□ -0.44
QKI-213	ENST00000544361	CIZ1	Q9ULV3	898 aa	Predicted RBP	12.3	□□□□□ -0.44
QKI-213	ENST00000544361	PYGB	P11216	843 aa		12.29	□□□□□ -0.44
QKI-213	ENST00000544361	PCDHB13	Q9Y5F0	798 aa		12.27	□□□□□ -0.45
QKI-213	ENST00000544361	POTEI	P0CG38	1075 aa		12.23	□□□□□ -0.45
QKI-213	ENST00000544361	SGIP1	Q9BQI5	828 aa		12.23	□□□□□ -0.45
QKI-213	ENST00000544361	IFNL1	Q8IU54	200 aa		12.2	□□□□□ -0.46
QKI-213	ENST00000544361	TRPC6	Q9Y210	931 aa		12.19	□□□□□ -0.46
QKI-213	ENST00000544361	CHRM1	P11229	460 aa	Predicted RBP	12.16	□□□□□ -0.46
QKI-213	ENST00000544361	ASTL	Q6HA08	431 aa	Predicted RBP	12.14	□□□□□ -0.47
QKI-213	ENST00000544361	TRIM41	Q8WV44	630 aa		12.14	□□□□□ -0.47
QKI-213	ENST00000544361	BMP2K	Q9NSY1	1161 aa	Predicted RBP	12.14	□□□□□ -0.47
QKI-213	ENST00000544361	PCDHB8	Q9UN66	801 aa		12.14	□□□□□ -0.47
QKI-213	ENST00000544361	ATMIN	O43313	823 aa	Predicted RBP	12.13	□□□□□ -0.47
QKI-213	ENST00000544361	TIE1	P35590	1138 aa		12.13	□□□□□ -0.47
QKI-213	ENST00000544361	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.12	□□□□□ -0.47
QKI-213	ENST00000544361	TTLL13P	A6NNM8	815 aa		12.1	□□□□□ -0.47
QKI-213	ENST00000544361	ATN1	P54259	1190 aa	Predicted RBP	12.08	□□□□□ -0.48
QKI-213	ENST00000544361	PELP1	Q8IZL8	1130 aa	Known RBP	12.08	□□□□□ -0.48
QKI-213	ENST00000544361	TMEM106C	Q9BVX2	250 aa		12.07	□□□□□ -0.48
QKI-213	ENST00000544361	TRIM35	Q9UPQ4	493 aa		12.03	□□□□□ -0.48
QKI-213	ENST00000544361	SLC39A7	Q92504	469 aa		12.01	□□□□□ -0.49
QKI-213	ENST00000544361	METRN	Q9UJH8	293 aa		12.01	□□□□□ -0.49
QKI-213	ENST00000544361	ECM2	O94769	699 aa	Predicted RBP	12	□□□□□ -0.49
QKI-213	ENST00000544361	PSEN1	P49768	467 aa		12	□□□□□ -0.49
QKI-213	ENST00000544361	PDAP1	Q13442	181 aa	Known RBP	12	□□□□□ -0.49
QKI-213	ENST00000544361	PKD2	Q13563	968 aa		12	□□□□□ -0.49
QKI-213	ENST00000544361	C7	P10643	843 aa		11.98	□□□□□ -0.49
QKI-213	ENST00000544361	RNF25	Q96BH1	459 aa	Predicted RBP	11.98	□□□□□ -0.49
QKI-213	ENST00000544361	RIOK3	O14730	519 aa	Known RBP	11.97	□□□□□ -0.49
QKI-213	ENST00000544361	LHX8	Q68G74	356 aa		11.94	□□□□□ -0.5
QKI-213	ENST00000544361	GOLGA2	Q08379	1002 aa		11.91	□□□□□ -0.5
QKI-213	ENST00000544361	IER5L	Q5T953	404 aa		11.91	□□□□□ -0.5
QKI-213	ENST00000544361	VGF	O15240	615 aa	Predicted RBP	11.89	□□□□□ -0.51
QKI-213	ENST00000544361	SEC24B	O95487	1268 aa		11.89	□□□□□ -0.51
QKI-213	ENST00000544361	RGL2	O15211	777 aa		11.88	□□□□□ -0.51
QKI-213	ENST00000544361	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	11.86	□□□□□ -0.51
QKI-213	ENST00000544361	MKRN3	Q13064	507 aa	Known RBP	11.86	□□□□□ -0.51
QKI-213	ENST00000544361	ZFP91	Q96JP5	570 aa	Predicted RBP	11.86	□□□□□ -0.51
QKI-213	ENST00000544361	CABP2	Q9NPB3	220 aa		11.86	□□□□□ -0.51
QKI-213	ENST00000544361	TAOK2	Q9UL54	1235 aa		11.86	□□□□□ -0.51
QKI-213	ENST00000544361	COLQ	Q9Y215	455 aa	Predicted RBP	11.86	□□□□□ -0.51
QKI-213	ENST00000544361	POTEF	A5A3E0	1075 aa		11.85	□□□□□ -0.51
QKI-213	ENST00000544361	POTEB2	H3BUK9	544 aa		11.85	□□□□□ -0.51
QKI-213	ENST00000544361	PLCG2	P16885	1265 aa		11.84	□□□□□ -0.51
QKI-213	ENST00000544361	IRX5	P78411	483 aa	Predicted RBP	11.82	□□□□□ -0.52
QKI-213	ENST00000544361	OCEL1	Q9H607	264 aa		11.79	□□□□□ -0.52
QKI-213	ENST00000544361	STK25	O00506	426 aa		11.78	□□□□□ -0.52
QKI-213	ENST00000544361	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.78	□□□□□ -0.52
QKI-213	ENST00000544361	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.77	□□□□□ -0.53	1e-20	■■■■■ 33.5
QKI-213	ENST00000544361	EFCAB3	Q8N7B9	438 aa		11.76	□□□□□ -0.53
QKI-213	ENST00000544361	STK24	Q9Y6E0	443 aa		11.76	□□□□□ -0.53
QKI-213	ENST00000544361	POTEJ	P0CG39	1038 aa		11.75	□□□□□ -0.53
QKI-213	ENST00000544361	PDCD7	Q8N8D1	485 aa	Known RBP	11.74	□□□□□ -0.53
QKI-213	ENST00000544361	OTUD5	Q96G74	571 aa		11.72	□□□□□ -0.53
QKI-213	ENST00000544361	MAMSTR	Q6ZN01	415 aa		11.71	□□□□□ -0.53
QKI-213	ENST00000544361	SCUBE2	Q9NQ36	999 aa		11.7	□□□□□ -0.54
QKI-213	ENST00000544361	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.69	□□□□□ -0.54
QKI-213	ENST00000544361	ILDR1	Q86SU0	546 aa	Predicted RBP	11.69	□□□□□ -0.54
QKI-213	ENST00000544361	SOX12	O15370	315 aa		11.65	□□□□□ -0.54
QKI-213	ENST00000544361	DCAF8L2	P0C7V8	631 aa		11.64	□□□□□ -0.55
QKI-213	ENST00000544361	CHGA	P10645	457 aa	Known RBP	11.64	□□□□□ -0.55
QKI-213	ENST00000544361	RTN4	Q9NQC3	1192 aa	Known RBP	11.64	□□□□□ -0.55
QKI-213	ENST00000544361	PHF8	Q9UPP1	1060 aa		11.64	□□□□□ -0.55
QKI-213	ENST00000544361	DPY19L2	Q6NUT2	758 aa		11.63	□□□□□ -0.55
QKI-213	ENST00000544361	HS6ST3	Q8IZP7	471 aa		11.63	□□□□□ -0.55
QKI-213	ENST00000544361	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.63	□□□□□ -0.55
QKI-213	ENST00000544361	NLRP6	P59044	892 aa		11.59	□□□□□ -0.55
QKI-213	ENST00000544361		G3V3G9	751 aa		11.58	□□□□□ -0.56
QKI-213	ENST00000544361	C3orf67	Q6ZVT6	689 aa		11.58	□□□□□ -0.56
QKI-213	ENST00000544361	MS4A4A	Q96JQ5	239 aa		11.58	□□□□□ -0.56
QKI-213	ENST00000544361	MFRP	Q9BY79	579 aa		11.58	□□□□□ -0.56
QKI-213	ENST00000544361	BOLA1	Q9Y3E2	137 aa		11.57	□□□□□ -0.56
QKI-213	ENST00000544361	FBXO22	Q8NEZ5	403 aa		11.56	□□□□□ -0.56
QKI-213	ENST00000544361	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.56	□□□□□ -0.56
QKI-213	ENST00000544361	SLAIN1	Q8ND83	568 aa		11.54	□□□□□ -0.56
QKI-213	ENST00000544361	MICALL2	Q8IY33	904 aa		11.5	□□□□□ -0.57
QKI-213	ENST00000544361	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.48	□□□□□ -0.57
QKI-213	ENST00000544361	NKX1-1	Q15270	411 aa	Predicted RBP	11.47	□□□□□ -0.57
QKI-213	ENST00000544361	DNAJC5	Q9H3Z4	198 aa		11.47	□□□□□ -0.57
QKI-213	ENST00000544361	PPP1R37	O75864	691 aa		11.4	□□□□□ -0.58
QKI-213	ENST00000544361	RYDEN	Q9NUL5	291 aa	Known RBP	11.4	□□□□□ -0.58
QKI-213	ENST00000544361	FAM163A	Q96GL9	167 aa	Predicted RBP	11.37	□□□□□ -0.59
QKI-213	ENST00000544361	TMEM92	Q6UXU6	159 aa		11.36	□□□□□ -0.59
QKI-213	ENST00000544361	SNPH	O15079	494 aa		11.34	□□□□□ -0.59
QKI-213	ENST00000544361	GTPBP6	O43824	516 aa	Predicted RBP	11.32	□□□□□ -0.6
QKI-213	ENST00000544361	LCE2D	Q5TA82	110 aa	Predicted RBP	11.3	□□□□□ -0.6
QKI-213	ENST00000544361	BBX	Q8WY36	941 aa	Predicted RBP	11.29	□□□□□ -0.6
QKI-213	ENST00000544361	ST18	O60284	1047 aa		11.26	□□□□□ -0.61
QKI-213	ENST00000544361	C2orf72	A6NCS6	295 aa		11.25	□□□□□ -0.61

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